RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 HSF4Q9ULV5 492 aa12.43□□□□□ -0.42
RETREG3-208ENST00000589797 YLPM1P49750 1951 aaKnown RBP12.43□□□□□ -0.42
RETREG3-208ENST00000589797 IGKV1D-13A0A0B4J2D9 117 aa12.43□□□□□ -0.42
RETREG3-208ENST00000589797 RNF222A6NCQ9 220 aa12.43□□□□□ -0.42
RETREG3-208ENST00000589797 OR7C2O60412 319 aa12.43□□□□□ -0.42
RETREG3-208ENST00000589797 OR5G3P0C626 314 aa12.43□□□□□ -0.42
RETREG3-208ENST00000589797 IGKV1-13P0DP09 117 aa12.43□□□□□ -0.42
RETREG3-208ENST00000589797 RBMXL3Q8N7X1 1067 aaKnown RBP12.43□□□□□ -0.42
RETREG3-208ENST00000589797 SSMEM1Q8WWF3 244 aa12.43□□□□□ -0.42
RETREG3-208ENST00000589797 BCL2L2Q92843 193 aaPredicted RBP12.43□□□□□ -0.42
RETREG3-208ENST00000589797 SMIM7Q9BQ49 75 aa12.43□□□□□ -0.42
RETREG3-208ENST00000589797 TUBAL3A6NHL2 446 aa12.43□□□□□ -0.42
RETREG3-208ENST00000589797 C19orf67A6NJJ6 358 aa12.43□□□□□ -0.42
RETREG3-208ENST00000589797 AHRRA9YTQ3 701 aa12.43□□□□□ -0.42
RETREG3-208ENST00000589797 NDUFB3O43676 98 aa12.43□□□□□ -0.42
RETREG3-208ENST00000589797 HKR1P10072 659 aa12.43□□□□□ -0.42
RETREG3-208ENST00000589797 MRPS11P82912 194 aaKnown RBP12.43□□□□□ -0.42
RETREG3-208ENST00000589797 MOB1BQ7L9L4 216 aa12.43□□□□□ -0.42
RETREG3-208ENST00000589797 OR4A4PQ8NGN8 299 aa12.43□□□□□ -0.42
RETREG3-208ENST00000589797 PHYHIPLQ96FC7 376 aa12.43□□□□□ -0.42
RETREG3-208ENST00000589797 TMEM222Q9H0R3 208 aa12.43□□□□□ -0.42
RETREG3-208ENST00000589797 IGHV3-72A0A0B4J1Y9 119 aa12.42□□□□□ -0.42
RETREG3-208ENST00000589797 TOX4O94842 621 aa12.42□□□□□ -0.42
RETREG3-208ENST00000589797 RD3LP0DJH9 198 aa12.42□□□□□ -0.42
RETREG3-208ENST00000589797 IL34Q6ZMJ4 242 aa12.42□□□□□ -0.42
RETREG3-208ENST00000589797 ETV3LQ6ZN32 361 aa12.42□□□□□ -0.42
RETREG3-208ENST00000589797 HSD17B13Q7Z5P4 300 aaPredicted RBP12.42□□□□□ -0.42
RETREG3-208ENST00000589797 MOB3BQ86TA1 216 aa12.42□□□□□ -0.42
RETREG3-208ENST00000589797 C22orf15Q8WYQ4 148 aa12.42□□□□□ -0.42
RETREG3-208ENST00000589797 WIPI2Q9Y4P8 454 aa12.42□□□□□ -0.42
RETREG3-208ENST00000589797 CYB5BO43169 146 aa12.42□□□□□ -0.42
RETREG3-208ENST00000589797 MUC1P15941 1255 aaPredicted RBP12.42□□□□□ -0.42
RETREG3-208ENST00000589797 OR8G5Q8NG78 346 aa12.42□□□□□ -0.42
RETREG3-208ENST00000589797 MSI2Q96DH6 328 aaKnown RBP12.42□□□□□ -0.42
RETREG3-208ENST00000589797 RAB40CQ96S21 281 aa12.42□□□□□ -0.42
RETREG3-208ENST00000589797 TLNRD1Q9H1K6 362 aa12.42□□□□□ -0.42
RETREG3-208ENST00000589797 FAM74A7A6NL05 159 aa12.42□□□□□ -0.42
RETREG3-208ENST00000589797 LDLRAD4O15165 306 aa12.42□□□□□ -0.42
RETREG3-208ENST00000589797 WNT5AP41221 380 aa12.42□□□□□ -0.42
RETREG3-208ENST00000589797 FAM74A3Q4VXF1 159 aa12.42□□□□□ -0.42
RETREG3-208ENST00000589797 FAM209AQ5JX71 171 aa12.42□□□□□ -0.42
RETREG3-208ENST00000589797 FFAR4Q5NUL3 377 aa12.42□□□□□ -0.42
RETREG3-208ENST00000589797 R3HDM4Q96D70 268 aa12.42□□□□□ -0.42
RETREG3-208ENST00000589797 EML6Q6ZMW3 1958 aa12.41□□□□□ -0.42
RETREG3-208ENST00000589797 OOEPA6NGQ2 149 aa12.41□□□□□ -0.42
RETREG3-208ENST00000589797 DEDDO75618 318 aa12.41□□□□□ -0.42
RETREG3-208ENST00000589797 MGST1P10620 155 aaKnown RBP12.41□□□□□ -0.42
RETREG3-208ENST00000589797 LGALS4P56470 323 aa12.41□□□□□ -0.42
RETREG3-208ENST00000589797 HIST2H3AQ71DI3 136 aa12.41□□□□□ -0.42
RETREG3-208ENST00000589797 GPR146Q96CH1 333 aa12.41□□□□□ -0.42
RETREG3-208ENST00000589797 FAM157AC9JC47 383 aa12.41□□□□□ -0.42
RETREG3-208ENST00000589797 FGFRL1Q8N441 504 aa12.41□□□□□ -0.42
RETREG3-208ENST00000589797 BOD1Q96IK1 185 aa12.41□□□□□ -0.42
RETREG3-208ENST00000589797 SCNM1Q9BWG6 230 aa12.41□□□□□ -0.42
RETREG3-208ENST00000589797 SMPD2O60906 423 aa12.41□□□□□ -0.42
RETREG3-208ENST00000589797 YIF1AO95070 293 aa12.41□□□□□ -0.42
RETREG3-208ENST00000589797 CDS2O95674 445 aa12.41□□□□□ -0.42
RETREG3-208ENST00000589797 LFNGQ8NES3 379 aa12.41□□□□□ -0.42
RETREG3-208ENST00000589797 TMEM204Q9BSN7 226 aa12.41□□□□□ -0.42
RETREG3-208ENST00000589797 LINC00470Q9BZP3 86 aa12.41□□□□□ -0.42
RETREG3-208ENST00000589797 DOK5Q9P104 306 aa12.41□□□□□ -0.42
RETREG3-208ENST00000589797 PPIHO43447 177 aaKnown RBP12.4□□□□□ -0.42
RETREG3-208ENST00000589797 SRSF10O75494 262 aaKnown RBP12.4□□□□□ -0.42
RETREG3-208ENST00000589797 MDH2P40926 338 aaKnown RBP12.4□□□□□ -0.42
RETREG3-208ENST00000589797 TMEM187Q14656 261 aa12.4□□□□□ -0.42
RETREG3-208ENST00000589797 P2RY6Q15077 328 aa12.4□□□□□ -0.42
RETREG3-208ENST00000589797 RSPO1Q2MKA7 263 aaPredicted RBP12.4□□□□□ -0.42
RETREG3-208ENST00000589797 TM2D1Q9BX74 207 aa12.4□□□□□ -0.42
RETREG3-208ENST00000589797 PATZ1Q9HBE1 687 aaKnown RBP12.4□□□□□ -0.42
RETREG3-208ENST00000589797 ARPC4-TTLL3A0A0A6YYG9 625 aa12.4□□□□□ -0.42
RETREG3-208ENST00000589797 IL18BPO95998 194 aa12.4□□□□□ -0.42
RETREG3-208ENST00000589797 TMEM11P17152 192 aa12.4□□□□□ -0.42
RETREG3-208ENST00000589797 COX5AP20674 150 aa12.4□□□□□ -0.42
RETREG3-208ENST00000589797 DVL1P1P54792 670 aaPredicted RBP12.4□□□□□ -0.42
RETREG3-208ENST00000589797 ZNF345Q14585 488 aa12.4□□□□□ -0.42
RETREG3-208ENST00000589797 RTL8BQ17RB0 113 aa12.4□□□□□ -0.42
RETREG3-208ENST00000589797 DTD1Q8TEA8 209 aa12.4□□□□□ -0.42
RETREG3-208ENST00000589797 RNF166Q96A37 237 aaPredicted RBP12.4□□□□□ -0.42
RETREG3-208ENST00000589797 RNF126Q9BV68 326 aa12.4□□□□□ -0.42
RETREG3-208ENST00000589797 PARD6AQ9NPB6 346 aa12.4□□□□□ -0.42
RETREG3-208ENST00000589797 RNF7Q9UBF6 113 aa12.4□□□□□ -0.42
RETREG3-208ENST00000589797 POMT1Q9Y6A1 747 aa12.4□□□□□ -0.42
RETREG3-208ENST00000589797 CCL21O00585 134 aa12.4□□□□□ -0.42
RETREG3-208ENST00000589797 P2RY1P47900 373 aa12.4□□□□□ -0.42
RETREG3-208ENST00000589797 TMEM45BQ96B21 275 aa12.4□□□□□ -0.42
RETREG3-208ENST00000589797 IGHV3-21A0A0B4J1V1 117 aa12.39□□□□□ -0.43
RETREG3-208ENST00000589797 MAP1LC3B2A6NCE7 125 aa12.39□□□□□ -0.43
RETREG3-208ENST00000589797 IGHV3-48P01763 117 aa12.39□□□□□ -0.43
RETREG3-208ENST00000589797 MMP7P09237 267 aaPredicted RBP12.39□□□□□ -0.43
RETREG3-208ENST00000589797 CTSSP25774 331 aa12.39□□□□□ -0.43
RETREG3-208ENST00000589797 HIST3H3Q16695 136 aa12.39□□□□□ -0.43
RETREG3-208ENST00000589797 LRRC10Q5BKY1 277 aa12.39□□□□□ -0.43
RETREG3-208ENST00000589797 C1orf185Q5T7R7 199 aa12.39□□□□□ -0.43
RETREG3-208ENST00000589797 ZNF429Q86V71 674 aa12.39□□□□□ -0.43
RETREG3-208ENST00000589797 MALSU1Q96EH3 234 aa12.39□□□□□ -0.43
RETREG3-208ENST00000589797 TAAR6Q96RI8 345 aa12.39□□□□□ -0.43
RETREG3-208ENST00000589797 MAP1LC3BQ9GZQ8 125 aa12.39□□□□□ -0.43
RETREG3-208ENST00000589797 HEXA-AS1Q9H8Q6 139 aa12.39□□□□□ -0.43
RETREG3-208ENST00000589797 GZMHP20718 246 aa12.39□□□□□ -0.43
RETREG3-208ENST00000589797 CCL1P22362 96 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 571.9 ms