RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 PPP1CCP36873 323 aaKnown RBP14.21□□□□□ -0.13
CCDC43-204ENST00000588687 DMKNQ6E0U4 476 aaPredicted RBP14.21□□□□□ -0.13
CCDC43-204ENST00000588687 ACSM6Q6P461 480 aa14.21□□□□□ -0.13
CCDC43-204ENST00000588687 TRAT1Q6PIZ9 186 aa14.21□□□□□ -0.13
CCDC43-204ENST00000588687 ZNF485Q8NCK3 441 aa14.21□□□□□ -0.13
CCDC43-204ENST00000588687 OR52L2PQ8NGH6 319 aa14.21□□□□□ -0.13
CCDC43-204ENST00000588687 MUL1Q969V5 352 aa14.21□□□□□ -0.13
CCDC43-204ENST00000588687 Q96M66 194 aa14.21□□□□□ -0.13
CCDC43-204ENST00000588687 CITED4Q96RK1 184 aa14.21□□□□□ -0.13
CCDC43-204ENST00000588687 OR2S2Q9NQN1 319 aa14.21□□□□□ -0.13
CCDC43-204ENST00000588687 JPT1Q9UK76 154 aa14.21□□□□□ -0.13
CCDC43-204ENST00000588687 MRPS28Q9Y2Q9 187 aaKnown RBP14.21□□□□□ -0.13
CCDC43-204ENST00000588687 IGHV4OR15-8A0A075B7B6 117 aa14.2□□□□□ -0.14
CCDC43-204ENST00000588687 A0A087WW49 117 aa14.2□□□□□ -0.14
CCDC43-204ENST00000588687 TRBV5-7A0A0A0MS05 114 aa14.2□□□□□ -0.14
CCDC43-204ENST00000588687 FAM90A7PA6NKC0 464 aa14.2□□□□□ -0.14
CCDC43-204ENST00000588687 FAM90A23PA8MXZ1 464 aa14.2□□□□□ -0.14
CCDC43-204ENST00000588687 CA11O75493 328 aa14.2□□□□□ -0.14
CCDC43-204ENST00000588687 GPR176Q14439 515 aa14.2□□□□□ -0.14
CCDC43-204ENST00000588687 GLIPR1L1Q6UWM5 242 aa14.2□□□□□ -0.14
CCDC43-204ENST00000588687 ZNF554Q86TJ5 538 aa14.2□□□□□ -0.14
CCDC43-204ENST00000588687 MRPL30Q8TCC3 161 aaKnown RBP14.2□□□□□ -0.14
CCDC43-204ENST00000588687 GHSRQ92847 366 aa14.2□□□□□ -0.14
CCDC43-204ENST00000588687 TM2D3Q9BRN9 247 aa14.2□□□□□ -0.14
CCDC43-204ENST00000588687 IFI27L2Q9H2X8 130 aa14.2□□□□□ -0.14
CCDC43-204ENST00000588687 PEX16Q9Y5Y5 336 aa14.2□□□□□ -0.14
CCDC43-204ENST00000588687 SAA2-SAA4A0A096LPE2 208 aa14.19□□□□□ -0.14
CCDC43-204ENST00000588687 LINC01619G3V211 115 aa14.19□□□□□ -0.14
CCDC43-204ENST00000588687 LGALS1P09382 135 aaKnown RBP14.19□□□□□ -0.14
CCDC43-204ENST00000588687 SAA2P0DJI9 122 aaPredicted RBP14.19□□□□□ -0.14
CCDC43-204ENST00000588687 EGR2P11161 476 aaPredicted RBP14.19□□□□□ -0.14
CCDC43-204ENST00000588687 LYL1P12980 280 aa14.19□□□□□ -0.14
CCDC43-204ENST00000588687 DCKP27707 260 aa14.19□□□□□ -0.14
CCDC43-204ENST00000588687 OR3A3P47888 321 aa14.19□□□□□ -0.14
CCDC43-204ENST00000588687 HTD2P86397 168 aa14.19□□□□□ -0.14
CCDC43-204ENST00000588687 Q499Y3 187 aa14.19□□□□□ -0.14
CCDC43-204ENST00000588687 LY6G6FQ5SQ64 297 aa14.19□□□□□ -0.14
CCDC43-204ENST00000588687 CASTOR1Q8WTX7 329 aa14.19□□□□□ -0.14
CCDC43-204ENST00000588687 ARPC1AQ92747 370 aa14.19□□□□□ -0.14
CCDC43-204ENST00000588687 ZNF251Q9BRH9 671 aa14.19□□□□□ -0.14
CCDC43-204ENST00000588687 BANF2Q9H503 90 aa14.19□□□□□ -0.14
CCDC43-204ENST00000588687 BABAM2Q9NXR7 383 aa14.19□□□□□ -0.14
CCDC43-204ENST00000588687 CLEC2DQ9UHP7 191 aa14.19□□□□□ -0.14
CCDC43-204ENST00000588687 YPEL1O60688 119 aa14.18□□□□□ -0.14
CCDC43-204ENST00000588687 GLAP06280 429 aa14.18□□□□□ -0.14
CCDC43-204ENST00000588687 MGMTP16455 207 aa14.18□□□□□ -0.14
CCDC43-204ENST00000588687 GABPB1Q06547 395 aaPredicted RBP14.18□□□□□ -0.14
CCDC43-204ENST00000588687 ECSCRQ19T08 205 aa14.18□□□□□ -0.14
CCDC43-204ENST00000588687 YIF1BQ5BJH7 314 aa14.18□□□□□ -0.14
CCDC43-204ENST00000588687 LIN54Q6MZP7 749 aa14.18□□□□□ -0.14
CCDC43-204ENST00000588687 ZFP1Q6P2D0 407 aa14.18□□□□□ -0.14
CCDC43-204ENST00000588687 YPEL2Q96QA6 119 aa14.18□□□□□ -0.14
CCDC43-204ENST00000588687 OR14A2Q96R54 314 aa14.18□□□□□ -0.14
CCDC43-204ENST00000588687 EDA2RQ9HAV5 297 aa14.18□□□□□ -0.14
CCDC43-204ENST00000588687 A0A1W2PN81 502 aa14.17□□□□□ -0.14
CCDC43-204ENST00000588687 UBE2QL1A1L167 161 aa14.17□□□□□ -0.14
CCDC43-204ENST00000588687 FUT3P21217 361 aa14.17□□□□□ -0.14
CCDC43-204ENST00000588687 CHRNA7P36544 502 aa14.17□□□□□ -0.14
CCDC43-204ENST00000588687 DOC2BQ14184 412 aa14.17□□□□□ -0.14
CCDC43-204ENST00000588687 HMGN3Q15651 99 aa14.17□□□□□ -0.14
CCDC43-204ENST00000588687 LRRC36Q1X8D7 754 aa14.17□□□□□ -0.14
CCDC43-204ENST00000588687 AWAT2Q6E213 333 aa14.17□□□□□ -0.14
CCDC43-204ENST00000588687 TMPRSS11AQ6ZMR5 421 aa14.17□□□□□ -0.14
CCDC43-204ENST00000588687 Q8N1Y9 231 aa14.17□□□□□ -0.14
CCDC43-204ENST00000588687 JAGN1Q8N5M9 183 aa14.17□□□□□ -0.14
CCDC43-204ENST00000588687 OR6Q1Q8NGQ2 317 aa14.17□□□□□ -0.14
CCDC43-204ENST00000588687 C9orf16Q9BUW7 83 aa14.17□□□□□ -0.14
CCDC43-204ENST00000588687 SELENOIQ9C0D9 397 aa14.17□□□□□ -0.14
CCDC43-204ENST00000588687 CST11Q9H112 138 aa14.17□□□□□ -0.14
CCDC43-204ENST00000588687 CHCHD3Q9NX63 227 aaKnown RBP14.17□□□□□ -0.14
CCDC43-204ENST00000588687 DIMT1Q9UNQ2 313 aaKnown RBP14.17□□□□□ -0.14
CCDC43-204ENST00000588687 FOXA2Q9Y261 457 aaPredicted RBP14.17□□□□□ -0.14
CCDC43-204ENST00000588687 ALMS1Q8TCU4 4167 aa14.17□□□□□ -0.14
CCDC43-204ENST00000588687 PDCD6O75340 191 aa14.16□□□□□ -0.14
CCDC43-204ENST00000588687 MAS1P04201 325 aa14.16□□□□□ -0.14
CCDC43-204ENST00000588687 OR8U9P0C7N5 309 aa14.16□□□□□ -0.14
CCDC43-204ENST00000588687 SNRPBP14678 240 aaKnown RBP14.16□□□□□ -0.14
CCDC43-204ENST00000588687 CX3CL1P78423 397 aa14.16□□□□□ -0.14
CCDC43-204ENST00000588687 FAM71F2Q6NXP2 309 aa14.16□□□□□ -0.14
CCDC43-204ENST00000588687 CD200R1LQ6Q8B3 271 aa14.16□□□□□ -0.14
CCDC43-204ENST00000588687 FAM131AQ6UXB0 335 aa14.16□□□□□ -0.14
CCDC43-204ENST00000588687 CDH26Q8IXH8 852 aa14.16□□□□□ -0.14
CCDC43-204ENST00000588687 ZFP41Q8N8Y5 198 aa14.16□□□□□ -0.14
CCDC43-204ENST00000588687 FBXL15Q9H469 300 aa14.16□□□□□ -0.14
CCDC43-204ENST00000588687 CKLFQ9UBR5 152 aa14.16□□□□□ -0.14
CCDC43-204ENST00000588687 NUBP2Q9Y5Y2 271 aa14.16□□□□□ -0.14
CCDC43-204ENST00000588687 A0A1W2PPK0 400 aa14.15□□□□□ -0.14
CCDC43-204ENST00000588687 ZNF660Q6AZW8 331 aaPredicted RBP14.15□□□□□ -0.14
CCDC43-204ENST00000588687 HAPLN4Q86UW8 402 aa14.15□□□□□ -0.14
CCDC43-204ENST00000588687 TCTEX1D1Q8N7M0 179 aa14.15□□□□□ -0.14
CCDC43-204ENST00000588687 DERL3Q96Q80 235 aa14.15□□□□□ -0.14
CCDC43-204ENST00000588687 ZMAT4Q9H898 229 aa14.15□□□□□ -0.14
CCDC43-204ENST00000588687 C19orf73Q9NVV2 129 aa14.15□□□□□ -0.14
CCDC43-204ENST00000588687 GAB2Q9UQC2 676 aa14.15□□□□□ -0.14
CCDC43-204ENST00000588687 A8MZ25 164 aa14.14□□□□□ -0.15
CCDC43-204ENST00000588687 FCN1O00602 326 aa14.14□□□□□ -0.15
CCDC43-204ENST00000588687 RRHO14718 337 aa14.14□□□□□ -0.15
CCDC43-204ENST00000588687 CRTAPO75718 401 aaPredicted RBP14.14□□□□□ -0.15
CCDC43-204ENST00000588687 CT45A6P0DMU7 189 aa14.14□□□□□ -0.15
CCDC43-204ENST00000588687 CT45A5P0DMU8 189 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms