RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 ZNF565Q8N9K5 539 aa12.35□□□□□ -0.43
CCDC43-203ENST00000588210 WDR31Q8NA23 367 aa12.35□□□□□ -0.43
CCDC43-203ENST00000588210 SLAMF9Q96A28 289 aa12.35□□□□□ -0.43
CCDC43-203ENST00000588210 SLC25A31Q9H0C2 315 aa12.35□□□□□ -0.43
CCDC43-203ENST00000588210 SLC35B3Q9H1N7 401 aa12.35□□□□□ -0.43
CCDC43-203ENST00000588210 PLEKHF2Q9H8W4 249 aa12.35□□□□□ -0.43
CCDC43-203ENST00000588210 LYRM2Q9NU23 88 aaPredicted RBP12.35□□□□□ -0.43
CCDC43-203ENST00000588210 KIR2DS1A0A191URI9 304 aa12.34□□□□□ -0.43
CCDC43-203ENST00000588210 DEFB108AA8MXU0 73 aa12.34□□□□□ -0.43
CCDC43-203ENST00000588210 COX5BP10606 129 aa12.34□□□□□ -0.43
CCDC43-203ENST00000588210 MMP9P14780 707 aa12.34□□□□□ -0.43
CCDC43-203ENST00000588210 UCP1P25874 307 aa12.34□□□□□ -0.43
CCDC43-203ENST00000588210 PPP1CCP36873 323 aaKnown RBP12.34□□□□□ -0.43
CCDC43-203ENST00000588210 KIR2DS4P43632 304 aa12.34□□□□□ -0.43
CCDC43-203ENST00000588210 POLR2GP62487 172 aaKnown RBP eCLIP12.34□□□□□ -0.43
CCDC43-203ENST00000588210 S100A12P80511 92 aa12.34□□□□□ -0.43
CCDC43-203ENST00000588210 KIR2DS1Q14954 304 aa12.34□□□□□ -0.43
CCDC43-203ENST00000588210 HIKESHIQ53FT3 197 aa12.34□□□□□ -0.43
CCDC43-203ENST00000588210 ALKBH2Q6NS38 261 aa12.34□□□□□ -0.43
CCDC43-203ENST00000588210 ZDHHC23Q8IYP9 409 aa12.34□□□□□ -0.43
CCDC43-203ENST00000588210 FAM213BQ8TBF2 198 aa12.34□□□□□ -0.43
CCDC43-203ENST00000588210 A0A096LPE4 126 aa12.34□□□□□ -0.43
CCDC43-203ENST00000588210 A0A1W2PPZ6 126 aa12.34□□□□□ -0.43
CCDC43-203ENST00000588210 M0R036 132 aa12.34□□□□□ -0.43
CCDC43-203ENST00000588210 ATP6V0CP27449 155 aa12.34□□□□□ -0.43
CCDC43-203ENST00000588210 UBE2NP61088 152 aaKnown RBP12.34□□□□□ -0.43
CCDC43-203ENST00000588210 HERPUD1Q15011 391 aa12.34□□□□□ -0.43
CCDC43-203ENST00000588210 CEACAM21Q3KPI0 293 aa12.34□□□□□ -0.43
CCDC43-203ENST00000588210 NMSQ5H8A3 153 aa12.34□□□□□ -0.43
CCDC43-203ENST00000588210 ZNF818PQ6ZRF7 136 aa12.34□□□□□ -0.43
CCDC43-203ENST00000588210 LILRB1Q8NHL6 650 aaPredicted RBP12.34□□□□□ -0.43
CCDC43-203ENST00000588210 FLNBO75369 2602 aaKnown RBP12.34□□□□□ -0.43
CCDC43-203ENST00000588210 A0A1W2PR80 420 aa12.33□□□□□ -0.44
CCDC43-203ENST00000588210 SIAH2O43255 324 aa12.33□□□□□ -0.44
CCDC43-203ENST00000588210 SCTP09683 121 aa12.33□□□□□ -0.44
CCDC43-203ENST00000588210 CTXN2P0C2S0 81 aa12.33□□□□□ -0.44
CCDC43-203ENST00000588210 HAAOP46952 286 aa12.33□□□□□ -0.44
CCDC43-203ENST00000588210 CLINT1Q14677 625 aa12.33□□□□□ -0.44
CCDC43-203ENST00000588210 SPIN3Q5JUX0 258 aa12.33□□□□□ -0.44
CCDC43-203ENST00000588210 MRPL21Q7Z2W9 205 aaKnown RBP12.33□□□□□ -0.44
CCDC43-203ENST00000588210 GAPTQ8N292 157 aa12.33□□□□□ -0.44
CCDC43-203ENST00000588210 ZNF561Q8N587 486 aa12.33□□□□□ -0.44
CCDC43-203ENST00000588210 TMEM252Q8N6L7 170 aa12.33□□□□□ -0.44
CCDC43-203ENST00000588210 OR1J1Q8NGS3 322 aa12.33□□□□□ -0.44
CCDC43-203ENST00000588210 IL22RA2Q969J5 263 aa12.33□□□□□ -0.44
CCDC43-203ENST00000588210 APOBEC3DQ96AK3 386 aaPredicted RBP12.33□□□□□ -0.44
CCDC43-203ENST00000588210 FBXO7Q9Y3I1 522 aa12.33□□□□□ -0.44
CCDC43-203ENST00000588210 CELSR2Q9HCU4 2923 aa12.33□□□□□ -0.44
CCDC43-203ENST00000588210 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.33□□□□□ -0.44
CCDC43-203ENST00000588210 A0A1W2PPH5 198 aa12.33□□□□□ -0.44
CCDC43-203ENST00000588210 BTBD17A6NE02 478 aa12.33□□□□□ -0.44
CCDC43-203ENST00000588210 C5orf52A6NGY3 159 aa12.33□□□□□ -0.44
CCDC43-203ENST00000588210 UBE2CO00762 179 aa12.33□□□□□ -0.44
CCDC43-203ENST00000588210 ADAM20O43506 726 aa12.33□□□□□ -0.44
CCDC43-203ENST00000588210 SSSCA1O60232 199 aa12.33□□□□□ -0.44
CCDC43-203ENST00000588210 VDAC1P21796 283 aa12.33□□□□□ -0.44
CCDC43-203ENST00000588210 GPM6AP51674 278 aa12.33□□□□□ -0.44
CCDC43-203ENST00000588210 RAB1AP62820 205 aa12.33□□□□□ -0.44
CCDC43-203ENST00000588210 BAXQ07812 192 aa12.33□□□□□ -0.44
CCDC43-203ENST00000588210 MKXQ8IYA7 352 aa12.33□□□□□ -0.44
CCDC43-203ENST00000588210 OR2G3Q8NGZ4 309 aa12.33□□□□□ -0.44
CCDC43-203ENST00000588210 TMEM171Q8WVE6 324 aa12.33□□□□□ -0.44
CCDC43-203ENST00000588210 GTF3AQ92664 365 aaKnown RBP12.33□□□□□ -0.44
CCDC43-203ENST00000588210 ATP23Q9Y6H3 246 aa12.33□□□□□ -0.44
CCDC43-203ENST00000588210 IGKV1D-13A0A0B4J2D9 117 aa12.32□□□□□ -0.44
CCDC43-203ENST00000588210 A6NLC8 198 aa12.32□□□□□ -0.44
CCDC43-203ENST00000588210 H0Y980 276 aa12.32□□□□□ -0.44
CCDC43-203ENST00000588210 EIF3GO75821 320 aaKnown RBP eCLIP12.32□□□□□ -0.44
CCDC43-203ENST00000588210 IGKV1-13P0DP09 117 aa12.32□□□□□ -0.44
CCDC43-203ENST00000588210 SULT1A1P50225 295 aa12.32□□□□□ -0.44
CCDC43-203ENST00000588210 SNRPEP62304 92 aaKnown RBP12.32□□□□□ -0.44
CCDC43-203ENST00000588210 VAMP2P63027 116 aa12.32□□□□□ -0.44
CCDC43-203ENST00000588210 NCMAPQ5T1S8 102 aa12.32□□□□□ -0.44
CCDC43-203ENST00000588210 LINC00596Q86U02 117 aa12.32□□□□□ -0.44
CCDC43-203ENST00000588210 OR5D13Q8NGL4 314 aa12.32□□□□□ -0.44
CCDC43-203ENST00000588210 PLPPR2Q96GM1 343 aa12.32□□□□□ -0.44
CCDC43-203ENST00000588210 HS3ST6Q96QI5 342 aa12.32□□□□□ -0.44
CCDC43-203ENST00000588210 C20orf24Q9BUV8 137 aa12.32□□□□□ -0.44
CCDC43-203ENST00000588210 IFT22Q9H7X7 185 aa12.32□□□□□ -0.44
CCDC43-203ENST00000588210 MTCH1Q9NZJ7 389 aa12.32□□□□□ -0.44
CCDC43-203ENST00000588210 IGKV1-6A0A0C4DH72 117 aa12.31□□□□□ -0.44
CCDC43-203ENST00000588210 ZNF732B4DXR9 585 aa12.31□□□□□ -0.44
CCDC43-203ENST00000588210 TRAPPC2LH3BP13 241 aa12.31□□□□□ -0.44
CCDC43-203ENST00000588210 HSPA12AO43301 675 aa12.31□□□□□ -0.44
CCDC43-203ENST00000588210 ACAA1P09110 424 aaPredicted RBP12.31□□□□□ -0.44
CCDC43-203ENST00000588210 ID3Q02535 119 aa12.31□□□□□ -0.44
CCDC43-203ENST00000588210 SPSB3Q6PJ21 355 aa12.31□□□□□ -0.44
CCDC43-203ENST00000588210 TMEM108Q6UXF1 575 aa12.31□□□□□ -0.44
CCDC43-203ENST00000588210 ODF3L1Q8IXM7 274 aa12.31□□□□□ -0.44
CCDC43-203ENST00000588210 FAM169BQ8N8A8 192 aa12.31□□□□□ -0.44
CCDC43-203ENST00000588210 PLPPR1Q8TBJ4 325 aa12.31□□□□□ -0.44
CCDC43-203ENST00000588210 NANOS1Q8WY41 292 aaKnown RBP12.31□□□□□ -0.44
CCDC43-203ENST00000588210 MALSU1Q96EH3 234 aa12.31□□□□□ -0.44
CCDC43-203ENST00000588210 RIMS4Q9H426 269 aaPredicted RBP12.31□□□□□ -0.44
CCDC43-203ENST00000588210 OPA3Q9H6K4 179 aa12.31□□□□□ -0.44
CCDC43-203ENST00000588210 TRBV6-6A0A0A6YYG2 114 aa12.31□□□□□ -0.44
CCDC43-203ENST00000588210 C5orf49A4QMS7 147 aa12.31□□□□□ -0.44
CCDC43-203ENST00000588210 S100A8P05109 93 aa12.31□□□□□ -0.44
CCDC43-203ENST00000588210 RAB5AP20339 215 aa12.31□□□□□ -0.44
CCDC43-203ENST00000588210 LOXP28300 417 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms