RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 Q3ZCU0 254 aa8.67□□□□□ -1.02
SMARCA4-213ENST00000587988 LY6G6FQ5SQ64 297 aa8.67□□□□□ -1.02
SMARCA4-213ENST00000587988 SLC25A48Q6ZT89 311 aaKnown RBP8.67□□□□□ -1.02
SMARCA4-213ENST00000587988 ODF3L1Q8IXM7 274 aa8.67□□□□□ -1.02
SMARCA4-213ENST00000587988 LINC00311Q8N616 119 aa8.67□□□□□ -1.02
SMARCA4-213ENST00000587988 OR10J5Q8NHC4 309 aa8.67□□□□□ -1.02
SMARCA4-213ENST00000587988 C15orf40Q8WUR7 153 aa8.67□□□□□ -1.02
SMARCA4-213ENST00000587988 FCAMRQ8WWV6 532 aa8.67□□□□□ -1.02
SMARCA4-213ENST00000587988 TOLLIPQ9H0E2 274 aa8.67□□□□□ -1.02
SMARCA4-213ENST00000587988 C11orf54Q9H0W9 315 aaPredicted RBP8.67□□□□□ -1.02
SMARCA4-213ENST00000587988 RDH8Q9NYR8 311 aa8.67□□□□□ -1.02
SMARCA4-213ENST00000587988 PTTG2Q9NZH5 202 aa8.67□□□□□ -1.02
SMARCA4-213ENST00000587988 RABL2AQ9UBK7 228 aaPredicted RBP8.67□□□□□ -1.02
SMARCA4-213ENST00000587988 MTFP1Q9UDX5 166 aa8.67□□□□□ -1.02
SMARCA4-213ENST00000587988 RABL2BQ9UNT1 228 aa8.67□□□□□ -1.02
SMARCA4-213ENST00000587988 TBL2Q9Y4P3 447 aaKnown RBP8.67□□□□□ -1.02
SMARCA4-213ENST00000587988 CUBNO60494 3623 aa8.67□□□□□ -1.02
SMARCA4-213ENST00000587988 GSTZ1O43708 216 aaPredicted RBP8.66□□□□□ -1.02
SMARCA4-213ENST00000587988 RGS11O94810 467 aa8.66□□□□□ -1.02
SMARCA4-213ENST00000587988 DIRAS3O95661 229 aa8.66□□□□□ -1.02
SMARCA4-213ENST00000587988 NFYAP23511 347 aaPredicted RBP8.66□□□□□ -1.02
SMARCA4-213ENST00000587988 HTR1DP28221 377 aa8.66□□□□□ -1.02
SMARCA4-213ENST00000587988 RCVRNP35243 200 aa8.66□□□□□ -1.02
SMARCA4-213ENST00000587988 RFX2P48378 723 aa8.66□□□□□ -1.02
SMARCA4-213ENST00000587988 ARPC4P59998 168 aa8.66□□□□□ -1.02
SMARCA4-213ENST00000587988 MRPS10P82664 201 aaKnown RBP8.66□□□□□ -1.02
SMARCA4-213ENST00000587988 SSX2Q16385 188 aa8.66□□□□□ -1.02
SMARCA4-213ENST00000587988 PYDC2Q56P42 97 aa8.66□□□□□ -1.02
SMARCA4-213ENST00000587988 SPANXN2Q5MJ10 180 aa8.66□□□□□ -1.02
SMARCA4-213ENST00000587988 MINOS1Q5TGZ0 78 aa8.66□□□□□ -1.02
SMARCA4-213ENST00000587988 LDLRAD3Q86YD5 345 aa8.66□□□□□ -1.02
SMARCA4-213ENST00000587988 H1FOOQ8IZA3 346 aaPredicted RBP8.66□□□□□ -1.02
SMARCA4-213ENST00000587988 SIGLECL1Q8N7X8 197 aa8.66□□□□□ -1.02
SMARCA4-213ENST00000587988 C8orf31Q8N9H6 132 aa8.66□□□□□ -1.02
SMARCA4-213ENST00000587988 OR5AP2Q8NGF4 316 aa8.66□□□□□ -1.02
SMARCA4-213ENST00000587988 OR10X1Q8NGY0 326 aa8.66□□□□□ -1.02
SMARCA4-213ENST00000587988 SMIM4Q8WVI0 70 aa8.66□□□□□ -1.02
SMARCA4-213ENST00000587988 SDHCQ99643 169 aaPredicted RBP8.66□□□□□ -1.02
SMARCA4-213ENST00000587988 GINS4Q9BRT9 223 aa8.66□□□□□ -1.02
SMARCA4-213ENST00000587988 ABHD14AQ9BUJ0 271 aa8.66□□□□□ -1.02
SMARCA4-213ENST00000587988 IFI27L2Q9H2X8 130 aa8.66□□□□□ -1.02
SMARCA4-213ENST00000587988 OCEL1Q9H607 264 aa8.66□□□□□ -1.02
SMARCA4-213ENST00000587988 DPM3Q9P2X0 92 aa8.66□□□□□ -1.02
SMARCA4-213ENST00000587988 RNF150Q9ULK6 438 aa8.66□□□□□ -1.02
SMARCA4-213ENST00000587988 RBMX2Q9Y388 322 aaKnown RBP8.66□□□□□ -1.02
SMARCA4-213ENST00000587988 HILPDAQ9Y5L2 63 aa8.66□□□□□ -1.02
SMARCA4-213ENST00000587988 MINOS1-NBL1R4GNA1 71 aa8.66□□□□□ -1.02
SMARCA4-213ENST00000587988 NAV3Q8IVL0 2385 aa8.65□□□□□ -1.02
SMARCA4-213ENST00000587988 LEUTXA8MZ59 168 aa8.65□□□□□ -1.02
SMARCA4-213ENST00000587988 J3QRK9 145 aa8.65□□□□□ -1.02
SMARCA4-213ENST00000587988 CTXN2P0C2S0 81 aa8.65□□□□□ -1.02
SMARCA4-213ENST00000587988 OR5H8P0DN80 308 aa8.65□□□□□ -1.02
SMARCA4-213ENST00000587988 PTBP1P26599 531 aaKnown RBP eCLIP8.65□□□□□ -1.02
SMARCA4-213ENST00000587988 HRH1P35367 487 aa8.65□□□□□ -1.02
SMARCA4-213ENST00000587988 CDK10Q15131 360 aa8.65□□□□□ -1.02
SMARCA4-213ENST00000587988 PLA1AQ53H76 456 aa8.65□□□□□ -1.02
SMARCA4-213ENST00000587988 TPTE2P1Q5T6R2 138 aa8.65□□□□□ -1.02
SMARCA4-213ENST00000587988 OVCH2Q7RTZ1 564 aa8.65□□□□□ -1.02
SMARCA4-213ENST00000587988 LYG1Q8N1E2 194 aa8.65□□□□□ -1.02
SMARCA4-213ENST00000587988 MFSD4AQ8N468 514 aa8.65□□□□□ -1.02
SMARCA4-213ENST00000587988 OR2AK2Q8NG84 335 aa8.65□□□□□ -1.02
SMARCA4-213ENST00000587988 ST6GALNAC6Q969X2 333 aa8.65□□□□□ -1.02
SMARCA4-213ENST00000587988 MALSU1Q96EH3 234 aa8.65□□□□□ -1.02
SMARCA4-213ENST00000587988 ABHD14BQ96IU4 210 aa8.65□□□□□ -1.02
SMARCA4-213ENST00000587988 AGMATQ9BSE5 352 aa8.65□□□□□ -1.02
SMARCA4-213ENST00000587988 THAP7Q9BT49 309 aaPredicted RBP8.65□□□□□ -1.02
SMARCA4-213ENST00000587988 SRRQ9GZT4 340 aa8.65□□□□□ -1.02
SMARCA4-213ENST00000587988 MEGF9Q9H1U4 602 aa8.65□□□□□ -1.02
SMARCA4-213ENST00000587988 PRDM13Q9H4Q3 707 aa8.65□□□□□ -1.02
SMARCA4-213ENST00000587988 AKIP1Q9NQ31 210 aa8.65□□□□□ -1.02
SMARCA4-213ENST00000587988 NECAP2Q9NVZ3 263 aa8.65□□□□□ -1.02
SMARCA4-213ENST00000587988 FAM96BQ9Y3D0 163 aa8.65□□□□□ -1.02
SMARCA4-213ENST00000587988 NSD1Q96L73 2696 aaPredicted RBP8.65□□□□□ -1.03
SMARCA4-213ENST00000587988 MTORP42345 2549 aa8.64□□□□□ -1.03
SMARCA4-213ENST00000587988 IGKV1D-13A0A0B4J2D9 117 aa8.64□□□□□ -1.03
SMARCA4-213ENST00000587988 M0QYG6 137 aa8.64□□□□□ -1.03
SMARCA4-213ENST00000587988 ITGB1BP1O14713 200 aa8.64□□□□□ -1.03
SMARCA4-213ENST00000587988 TUSC2O75896 110 aa8.64□□□□□ -1.03
SMARCA4-213ENST00000587988 CD3DP04234 171 aa8.64□□□□□ -1.03
SMARCA4-213ENST00000587988 FBP1P09467 338 aa8.64□□□□□ -1.03
SMARCA4-213ENST00000587988 OR8U9P0C7N5 309 aa8.64□□□□□ -1.03
SMARCA4-213ENST00000587988 IGKV1-13P0DP09 117 aa8.64□□□□□ -1.03
SMARCA4-213ENST00000587988 AADACP22760 399 aa8.64□□□□□ -1.03
SMARCA4-213ENST00000587988 FCGR2CP31995 323 aa8.64□□□□□ -1.03
SMARCA4-213ENST00000587988 OR3A3P47888 321 aa8.64□□□□□ -1.03
SMARCA4-213ENST00000587988 REG1BP48304 166 aa8.64□□□□□ -1.03
SMARCA4-213ENST00000587988 RAB13P51153 203 aa8.64□□□□□ -1.03
SMARCA4-213ENST00000587988 TAS2R46P59540 309 aa8.64□□□□□ -1.03
SMARCA4-213ENST00000587988 ACTBP60709 375 aa8.64□□□□□ -1.03
SMARCA4-213ENST00000587988 ACTG1P63261 375 aa8.64□□□□□ -1.03
SMARCA4-213ENST00000587988 Q6YL49 198 aa8.64□□□□□ -1.03
SMARCA4-213ENST00000587988 Q8N402 240 aa8.64□□□□□ -1.03
SMARCA4-213ENST00000587988 TMEM229BQ8NBD8 167 aa8.64□□□□□ -1.03
SMARCA4-213ENST00000587988 OR4D10Q8NGI6 311 aa8.64□□□□□ -1.03
SMARCA4-213ENST00000587988 OR5H2Q8NGV7 314 aa8.64□□□□□ -1.03
SMARCA4-213ENST00000587988 OR8U1Q8NH10 309 aa8.64□□□□□ -1.03
SMARCA4-213ENST00000587988 EDARADDQ8WWZ3 215 aa8.64□□□□□ -1.03
SMARCA4-213ENST00000587988 TRIM63Q969Q1 353 aa8.64□□□□□ -1.03
SMARCA4-213ENST00000587988 RBMXL1Q96E39 390 aaKnown RBP8.64□□□□□ -1.03
SMARCA4-213ENST00000587988 TINAGL1Q9GZM7 467 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms