RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 SLC35G3Q8N808 338 aa16.47■□□□□ 0.23
TRIM47-204ENST00000587339 OR51H1Q8NH63 302 aa16.47■□□□□ 0.23
TRIM47-204ENST00000587339 TMEM56Q96MV1 263 aa16.47■□□□□ 0.23
TRIM47-204ENST00000587339 OR2D2Q9H210 308 aa16.47■□□□□ 0.23
TRIM47-204ENST00000587339 GNG12Q9UBI6 72 aa16.47■□□□□ 0.23
TRIM47-204ENST00000587339 JPT1Q9UK76 154 aa16.47■□□□□ 0.23
TRIM47-204ENST00000587339 TMEM56-RWDD3S4R434 201 aa16.47■□□□□ 0.23
TRIM47-204ENST00000587339 UCP1P25874 307 aa16.46■□□□□ 0.23
TRIM47-204ENST00000587339 TMEM65Q6PI78 240 aa16.46■□□□□ 0.23
TRIM47-204ENST00000587339 RAB1BQ9H0U4 201 aa16.46■□□□□ 0.23
TRIM47-204ENST00000587339 RNF150Q9ULK6 438 aa16.46■□□□□ 0.23
TRIM47-204ENST00000587339 TMED3Q9Y3Q3 217 aa16.46■□□□□ 0.23
TRIM47-204ENST00000587339 F2RL2O00254 374 aa16.45■□□□□ 0.22
TRIM47-204ENST00000587339 ADAM20O43506 726 aa16.45■□□□□ 0.22
TRIM47-204ENST00000587339 B3GALNT1O75752 331 aa16.45■□□□□ 0.22
TRIM47-204ENST00000587339 CDS2O95674 445 aa16.45■□□□□ 0.22
TRIM47-204ENST00000587339 SOD3P08294 240 aa16.45■□□□□ 0.22
TRIM47-204ENST00000587339 CGB3P0DN86 165 aa16.45■□□□□ 0.22
TRIM47-204ENST00000587339 CGB7P0DN87 165 aa16.45■□□□□ 0.22
TRIM47-204ENST00000587339 RPA2P15927 270 aa16.45■□□□□ 0.22
TRIM47-204ENST00000587339 OMGP23515 440 aa16.45■□□□□ 0.22
TRIM47-204ENST00000587339 EDARADDQ8WWZ3 215 aa16.45■□□□□ 0.22
TRIM47-204ENST00000587339 MFFQ9GZY8 342 aa16.45■□□□□ 0.22
TRIM47-204ENST00000587339 TANC2Q9HCD6 1990 aa16.45■□□□□ 0.22
TRIM47-204ENST00000587339 KBTBD11-OT1A0A1B0GTJ5 212 aa16.45■□□□□ 0.22
TRIM47-204ENST00000587339 TNFRSF13BO14836 293 aaPredicted RBP16.45■□□□□ 0.22
TRIM47-204ENST00000587339 IGFBP2P18065 325 aa16.45■□□□□ 0.22
TRIM47-204ENST00000587339 IL15RAQ13261 267 aa16.45■□□□□ 0.22
TRIM47-204ENST00000587339 C11orf71Q6IPW1 123 aa16.45■□□□□ 0.22
TRIM47-204ENST00000587339 FGFRL1Q8N441 504 aa16.45■□□□□ 0.22
TRIM47-204ENST00000587339 ZBTB34Q8NCN2 500 aa16.45■□□□□ 0.22
TRIM47-204ENST00000587339 MBD2Q9UBB5 411 aa16.45■□□□□ 0.22
TRIM47-204ENST00000587339 CLN8Q9UBY8 286 aa16.45■□□□□ 0.22
TRIM47-204ENST00000587339 LYNX1G3V0Z9 82 aa16.44■□□□□ 0.22
TRIM47-204ENST00000587339 NDUFA2O43678 99 aa16.44■□□□□ 0.22
TRIM47-204ENST00000587339 WNT2P09544 360 aa16.44■□□□□ 0.22
TRIM47-204ENST00000587339 LYNX1P0DP58 116 aa16.44■□□□□ 0.22
TRIM47-204ENST00000587339 COL8A2P25067 703 aa16.44■□□□□ 0.22
TRIM47-204ENST00000587339 LOXL3P58215 753 aa16.44■□□□□ 0.22
TRIM47-204ENST00000587339 C17orf58Q2M2W7 97 aa16.44■□□□□ 0.22
TRIM47-204ENST00000587339 MORN2Q502X0 79 aa16.44■□□□□ 0.22
TRIM47-204ENST00000587339 LYPD2Q6UXB3 125 aa16.44■□□□□ 0.22
TRIM47-204ENST00000587339 TCF23Q7RTU1 214 aa16.44■□□□□ 0.22
TRIM47-204ENST00000587339 A0A1W2PPR1 153 aa16.43■□□□□ 0.22
TRIM47-204ENST00000587339 hADV38S2A0JD32 116 aa16.43■□□□□ 0.22
TRIM47-204ENST00000587339 NDUFB3O43676 98 aa16.43■□□□□ 0.22
TRIM47-204ENST00000587339 YPEL1O60688 119 aa16.43■□□□□ 0.22
TRIM47-204ENST00000587339 SERPINE2P07093 398 aa16.43■□□□□ 0.22
TRIM47-204ENST00000587339 DANCRP0C864 163 aa16.43■□□□□ 0.22
TRIM47-204ENST00000587339 PET100P0DJ07 73 aa16.43■□□□□ 0.22
TRIM47-204ENST00000587339 S100A11P31949 105 aa16.43■□□□□ 0.22
TRIM47-204ENST00000587339 AP2S1P53680 142 aaPredicted RBP16.43■□□□□ 0.22
TRIM47-204ENST00000587339 RAB32Q13637 225 aa16.43■□□□□ 0.22
TRIM47-204ENST00000587339 LRRC10Q5BKY1 277 aa16.43■□□□□ 0.22
TRIM47-204ENST00000587339 SELENOHQ8IZQ5 122 aaKnown RBP16.43■□□□□ 0.22
TRIM47-204ENST00000587339 CORO2AQ92828 525 aa16.43■□□□□ 0.22
TRIM47-204ENST00000587339 RBPMSQ93062 196 aaKnown RBP16.43■□□□□ 0.22
TRIM47-204ENST00000587339 YPEL2Q96QA6 119 aa16.43■□□□□ 0.22
TRIM47-204ENST00000587339 AGMATQ9BSE5 352 aa16.43■□□□□ 0.22
TRIM47-204ENST00000587339 KAAG1Q9UBP8 84 aa16.43■□□□□ 0.22
TRIM47-204ENST00000587339 TNFSF18Q9UNG2 199 aa16.43■□□□□ 0.22
TRIM47-204ENST00000587339 PSG11Q9UQ72 335 aa16.43■□□□□ 0.22
TRIM47-204ENST00000587339 OPCMLQ14982 345 aa16.43■□□□□ 0.22
TRIM47-204ENST00000587339 DTX2Q86UW9 622 aa16.43■□□□□ 0.22
TRIM47-204ENST00000587339 ARL6Q9H0F7 186 aa16.43■□□□□ 0.22
TRIM47-204ENST00000587339 PLEKHF2Q9H8W4 249 aa16.43■□□□□ 0.22
TRIM47-204ENST00000587339 LIN7CQ9NUP9 197 aaKnown RBP16.43■□□□□ 0.22
TRIM47-204ENST00000587339 LINC00312Q9Y6C7 94 aa16.43■□□□□ 0.22
TRIM47-204ENST00000587339 LRBAP50851 2863 aa16.42■□□□□ 0.22
TRIM47-204ENST00000587339 PIGBOS1A0A0B4J2F0 54 aa16.42■□□□□ 0.22
TRIM47-204ENST00000587339 ZNF729A6NN14 1252 aaPredicted RBP16.42■□□□□ 0.22
TRIM47-204ENST00000587339 RNF212BA8MTL3 300 aa16.42■□□□□ 0.22
TRIM47-204ENST00000587339 ST8SIA5O15466 376 aa16.42■□□□□ 0.22
TRIM47-204ENST00000587339 ZNF16P17020 682 aaPredicted RBP16.42■□□□□ 0.22
TRIM47-204ENST00000587339 S100A10P60903 97 aa16.42■□□□□ 0.22
TRIM47-204ENST00000587339 RPL31P62899 125 aaKnown RBP16.42■□□□□ 0.22
TRIM47-204ENST00000587339 MEF2CQ06413 473 aaPredicted RBP16.42■□□□□ 0.22
TRIM47-204ENST00000587339 TMUB2Q71RG4 321 aa16.42■□□□□ 0.22
TRIM47-204ENST00000587339 IL22RA2Q969J5 263 aa16.42■□□□□ 0.22
TRIM47-204ENST00000587339 RNF126Q9BV68 326 aa16.42■□□□□ 0.22
TRIM47-204ENST00000587339 HEXA-AS1Q9H8Q6 139 aa16.42■□□□□ 0.22
TRIM47-204ENST00000587339 LAMP3Q9UQV4 416 aa16.42■□□□□ 0.22
TRIM47-204ENST00000587339 DUXBA0A1W2PPF3 345 aa16.41■□□□□ 0.22
TRIM47-204ENST00000587339 DVL1O14640 695 aa16.41■□□□□ 0.22
TRIM47-204ENST00000587339 MSMO1Q15800 293 aa16.41■□□□□ 0.22
TRIM47-204ENST00000587339 FAM219AQ8IW50 185 aa16.41■□□□□ 0.22
TRIM47-204ENST00000587339 INO80EQ8NBZ0 244 aaPredicted RBP16.41■□□□□ 0.22
TRIM47-204ENST00000587339 FAM216AQ8WUB2 273 aa16.41■□□□□ 0.22
TRIM47-204ENST00000587339 DCUN1D4Q92564 292 aa16.41■□□□□ 0.22
TRIM47-204ENST00000587339 ABHD14BQ96IU4 210 aa16.41■□□□□ 0.22
TRIM47-204ENST00000587339 CTSZQ9UBR2 303 aa16.41■□□□□ 0.22
TRIM47-204ENST00000587339 HRNRQ86YZ3 2850 aaPredicted RBP16.41■□□□□ 0.22
TRIM47-204ENST00000587339 H0YIZ8 118 aa16.41■□□□□ 0.22
TRIM47-204ENST00000587339 FCN3O75636 299 aa16.41■□□□□ 0.22
TRIM47-204ENST00000587339 VDAC1P21796 283 aa16.41■□□□□ 0.22
TRIM47-204ENST00000587339 PRSS54Q6PEW0 395 aa16.41■□□□□ 0.22
TRIM47-204ENST00000587339 ZNF843Q8N446 348 aa16.41■□□□□ 0.22
TRIM47-204ENST00000587339 OR8H1Q8NGG4 311 aa16.41■□□□□ 0.22
TRIM47-204ENST00000587339 LINC00574Q9H8X3 128 aa16.41■□□□□ 0.22
TRIM47-204ENST00000587339 ZFYVE26Q68DK2 2539 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms