RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 GZMHP20718 246 aa9.44□□□□□ -0.9
LIG3-204ENST00000585740 ZP3P21754 424 aa9.44□□□□□ -0.9
LIG3-204ENST00000585740 CCKARP32238 428 aa9.44□□□□□ -0.9
LIG3-204ENST00000585740 VAMP2P63027 116 aa9.44□□□□□ -0.9
LIG3-204ENST00000585740 HTD2P86397 168 aa9.44□□□□□ -0.9
LIG3-204ENST00000585740 TNFAIP6P98066 277 aaPredicted RBP9.44□□□□□ -0.9
LIG3-204ENST00000585740 AESQ08117 197 aa9.44□□□□□ -0.9
LIG3-204ENST00000585740 CATR1Q13166 79 aa9.44□□□□□ -0.9
LIG3-204ENST00000585740 MOGAT3Q86VF5 341 aa9.44□□□□□ -0.9
LIG3-204ENST00000585740 WFDC8Q8IUA0 241 aa9.44□□□□□ -0.9
LIG3-204ENST00000585740 GCSAMQ8N6F7 178 aa9.44□□□□□ -0.9
LIG3-204ENST00000585740 CD177Q8N6Q3 437 aa9.44□□□□□ -0.9
LIG3-204ENST00000585740 GALNT11Q8NCW6 608 aa9.44□□□□□ -0.9
LIG3-204ENST00000585740 OR52M1Q8NGK5 317 aa9.44□□□□□ -0.9
LIG3-204ENST00000585740 OR1L1Q8NH94 360 aa9.44□□□□□ -0.9
LIG3-204ENST00000585740 Q8TCH9 128 aa9.44□□□□□ -0.9
LIG3-204ENST00000585740 FAM222BQ8WU58 562 aa9.44□□□□□ -0.9
LIG3-204ENST00000585740 SAT2Q96F10 170 aaPredicted RBP9.44□□□□□ -0.9
LIG3-204ENST00000585740 RNF7Q9UBF6 113 aa9.44□□□□□ -0.9
LIG3-204ENST00000585740 FBXL17Q9UF56 701 aa9.44□□□□□ -0.9
LIG3-204ENST00000585740 TRAV39A0A0B4J263 110 aa9.43□□□□□ -0.9
LIG3-204ENST00000585740 WRBO00258 174 aa9.43□□□□□ -0.9
LIG3-204ENST00000585740 KCNAB3O43448 404 aa9.43□□□□□ -0.9
LIG3-204ENST00000585740 ZNF737O75373 536 aa9.43□□□□□ -0.9
LIG3-204ENST00000585740 FGF2P09038 288 aa9.43□□□□□ -0.9
LIG3-204ENST00000585740 OR8U9P0C7N5 309 aa9.43□□□□□ -0.9
LIG3-204ENST00000585740 FAM87AP0C7U9 286 aa9.43□□□□□ -0.9
LIG3-204ENST00000585740 IRF2P14316 349 aa9.43□□□□□ -0.9
LIG3-204ENST00000585740 EGR1P18146 543 aa9.43□□□□□ -0.9
LIG3-204ENST00000585740 TMEM33P57088 247 aa9.43□□□□□ -0.9
LIG3-204ENST00000585740 ID3Q02535 119 aa9.43□□□□□ -0.9
LIG3-204ENST00000585740 KLRB1Q12918 225 aa9.43□□□□□ -0.9
LIG3-204ENST00000585740 CR1LQ2VPA4 569 aa9.43□□□□□ -0.9
LIG3-204ENST00000585740 UQCC3Q6UW78 93 aa9.43□□□□□ -0.9
LIG3-204ENST00000585740 DRAM1Q8N682 238 aa9.43□□□□□ -0.9
LIG3-204ENST00000585740 UBAC2Q8NBM4 344 aa9.43□□□□□ -0.9
LIG3-204ENST00000585740 DMBX1Q8NFW5 382 aa9.43□□□□□ -0.9
LIG3-204ENST00000585740 OR8U1Q8NH10 309 aa9.43□□□□□ -0.9
LIG3-204ENST00000585740 OR51H1Q8NH63 302 aa9.43□□□□□ -0.9
LIG3-204ENST00000585740 RNASE11Q8TAA1 199 aaKnown RBP9.43□□□□□ -0.9
LIG3-204ENST00000585740 MRGPRDQ8TDS7 321 aa9.43□□□□□ -0.9
LIG3-204ENST00000585740 EDARADDQ8WWZ3 215 aa9.43□□□□□ -0.9
LIG3-204ENST00000585740 DMRTA2Q96SC8 542 aa9.43□□□□□ -0.9
LIG3-204ENST00000585740 OR2S2Q9NQN1 319 aa9.43□□□□□ -0.9
LIG3-204ENST00000585740 CADP27708 2225 aa9.42□□□□□ -0.9
LIG3-204ENST00000585740 ODAMA1E959 279 aa9.42□□□□□ -0.9
LIG3-204ENST00000585740 RAB19A4D1S5 217 aa9.42□□□□□ -0.9
LIG3-204ENST00000585740 DPRXA6NFQ7 191 aa9.42□□□□□ -0.9
LIG3-204ENST00000585740 A8MXK9 166 aa9.42□□□□□ -0.9
LIG3-204ENST00000585740 K7N7A8 449 aa9.42□□□□□ -0.9
LIG3-204ENST00000585740 ABCD4O14678 606 aa9.42□□□□□ -0.9
LIG3-204ENST00000585740 TNFSF12O43508 249 aa9.42□□□□□ -0.9
LIG3-204ENST00000585740 IGHV1-46P01743 117 aa9.42□□□□□ -0.9
LIG3-204ENST00000585740 CD55P08174 381 aa9.42□□□□□ -0.9
LIG3-204ENST00000585740 TNFRSF1AP19438 455 aa9.42□□□□□ -0.9
LIG3-204ENST00000585740 GLIPR1P48060 266 aa9.42□□□□□ -0.9
LIG3-204ENST00000585740 ASCL1P50553 236 aa9.42□□□□□ -0.9
LIG3-204ENST00000585740 BLOC1S1P78537 153 aa9.42□□□□□ -0.9
LIG3-204ENST00000585740 BAXQ07812 192 aa9.42□□□□□ -0.9
LIG3-204ENST00000585740 TMEM30BQ3MIR4 351 aa9.42□□□□□ -0.9
LIG3-204ENST00000585740 FAM74A1Q5RGS3 127 aa9.42□□□□□ -0.9
LIG3-204ENST00000585740 RPL7L1Q6DKI1 246 aaKnown RBP9.42□□□□□ -0.9
LIG3-204ENST00000585740 ZNF66Q6ZN08 573 aa9.42□□□□□ -0.9
LIG3-204ENST00000585740 FAM219AQ8IW50 185 aa9.42□□□□□ -0.9
LIG3-204ENST00000585740 ZNF561Q8N587 486 aa9.42□□□□□ -0.9
LIG3-204ENST00000585740 OR2C3Q8N628 320 aa9.42□□□□□ -0.9
LIG3-204ENST00000585740 ARL11Q969Q4 196 aa9.42□□□□□ -0.9
LIG3-204ENST00000585740 FAM234AQ9H0X4 552 aa9.42□□□□□ -0.9
LIG3-204ENST00000585740 ARV1Q9H2C2 271 aa9.42□□□□□ -0.9
LIG3-204ENST00000585740 C11orf1Q9H5F2 150 aa9.42□□□□□ -0.9
LIG3-204ENST00000585740 BARX1Q9HBU1 254 aaPredicted RBP9.42□□□□□ -0.9
LIG3-204ENST00000585740 OR6C3Q9NZP0 311 aa9.42□□□□□ -0.9
LIG3-204ENST00000585740 SH3BGRL2Q9UJC5 107 aa9.42□□□□□ -0.9
LIG3-204ENST00000585740 METRNQ9UJH8 293 aa9.42□□□□□ -0.9
LIG3-204ENST00000585740 JPT1Q9UK76 154 aa9.42□□□□□ -0.9
LIG3-204ENST00000585740 PPP1R3CQ9UQK1 317 aa9.42□□□□□ -0.9
LIG3-204ENST00000585740 MYO9AB2RTY4 2548 aa9.41□□□□□ -0.9
LIG3-204ENST00000585740 IGKV1D-17A0A075B6S4 117 aa9.41□□□□□ -0.9
LIG3-204ENST00000585740 FAM90A26D6RGX4 464 aa9.41□□□□□ -0.9
LIG3-204ENST00000585740 TEX46H3BTG2 121 aa9.41□□□□□ -0.9
LIG3-204ENST00000585740 ITGB1BP1O14713 200 aa9.41□□□□□ -0.9
LIG3-204ENST00000585740 PITX3O75364 302 aa9.41□□□□□ -0.9
LIG3-204ENST00000585740 IGLV2-14P01704 120 aa9.41□□□□□ -0.9
LIG3-204ENST00000585740 MUC1P15941 1255 aaPredicted RBP9.41□□□□□ -0.9
LIG3-204ENST00000585740 SULT1A2P50226 295 aa9.41□□□□□ -0.9
LIG3-204ENST00000585740 PRR30Q53SZ7 412 aaPredicted RBP9.41□□□□□ -0.9
LIG3-204ENST00000585740 STPG2Q8N412 459 aa9.41□□□□□ -0.9
LIG3-204ENST00000585740 BOLLQ8N9W6 283 aaKnown RBP9.41□□□□□ -0.9
LIG3-204ENST00000585740 ST6GALNAC3Q8NDV1 305 aa9.41□□□□□ -0.9
LIG3-204ENST00000585740 OR52L2PQ8NGH6 319 aa9.41□□□□□ -0.9
LIG3-204ENST00000585740 OR13A1Q8NGR1 328 aa9.41□□□□□ -0.9
LIG3-204ENST00000585740 TMED6Q8WW62 240 aa9.41□□□□□ -0.9
LIG3-204ENST00000585740 MARC2Q969Z3 335 aa9.41□□□□□ -0.9
LIG3-204ENST00000585740 GPR146Q96CH1 333 aa9.41□□□□□ -0.9
LIG3-204ENST00000585740 C14orf79Q96F83 325 aa9.41□□□□□ -0.9
LIG3-204ENST00000585740 SDSLQ96GA7 329 aa9.41□□□□□ -0.9
LIG3-204ENST00000585740 RAB40CQ96S21 281 aa9.41□□□□□ -0.9
LIG3-204ENST00000585740 GINS3Q9BRX5 216 aa9.41□□□□□ -0.9
LIG3-204ENST00000585740 EGLN1Q9GZT9 426 aa9.41□□□□□ -0.9
LIG3-204ENST00000585740 OR2D2Q9H210 308 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms