RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 IGKV1-6A0A0C4DH72 117 aa7.76□□□□□ -1.17
SS18-220ENST00000582092 A0A1B0GW55 424 aa7.76□□□□□ -1.17
SS18-220ENST00000582092 DUXBA0A1W2PPF3 345 aa7.76□□□□□ -1.17
SS18-220ENST00000582092 ODAMA1E959 279 aa7.76□□□□□ -1.17
SS18-220ENST00000582092 C12orf77C9JDV5 145 aa7.76□□□□□ -1.17
SS18-220ENST00000582092 K7N7A8 449 aa7.76□□□□□ -1.17
SS18-220ENST00000582092 LGALS8O00214 317 aa7.76□□□□□ -1.17
SS18-220ENST00000582092 WRBO00258 174 aa7.76□□□□□ -1.17
SS18-220ENST00000582092 TNFSF12O43508 249 aa7.76□□□□□ -1.17
SS18-220ENST00000582092 PGLYRP1O75594 196 aaPredicted RBP7.76□□□□□ -1.17
SS18-220ENST00000582092 GYPAP02724 150 aa7.76□□□□□ -1.17
SS18-220ENST00000582092 HEXAP06865 529 aa7.76□□□□□ -1.17
SS18-220ENST00000582092 DUX4L2P0CJ85 424 aa7.76□□□□□ -1.17
SS18-220ENST00000582092 DUX4L3P0CJ86 424 aa7.76□□□□□ -1.17
SS18-220ENST00000582092 DUX4L4P0CJ87 422 aa7.76□□□□□ -1.17
SS18-220ENST00000582092 DUX4L5P0CJ88 424 aa7.76□□□□□ -1.17
SS18-220ENST00000582092 DUX4L6P0CJ89 424 aa7.76□□□□□ -1.17
SS18-220ENST00000582092 DUX4L7P0CJ90 424 aa7.76□□□□□ -1.17
SS18-220ENST00000582092 NDUFB7P17568 137 aa7.76□□□□□ -1.17
SS18-220ENST00000582092 CATR1Q13166 79 aa7.76□□□□□ -1.17
SS18-220ENST00000582092 GNMTQ14749 295 aa7.76□□□□□ -1.17
SS18-220ENST00000582092 HFEQ30201 348 aa7.76□□□□□ -1.17
SS18-220ENST00000582092 OR8H3Q8N146 312 aa7.76□□□□□ -1.17
SS18-220ENST00000582092 ZNRF1Q8ND25 227 aa7.76□□□□□ -1.17
SS18-220ENST00000582092 BVESQ8NE79 360 aa7.76□□□□□ -1.17
SS18-220ENST00000582092 OR52L2PQ8NGH6 319 aa7.76□□□□□ -1.17
SS18-220ENST00000582092 ANGPTL6Q8NI99 470 aa7.76□□□□□ -1.17
SS18-220ENST00000582092 RFESDQ8TAC1 157 aa7.76□□□□□ -1.17
SS18-220ENST00000582092 UBALD1Q8TB05 177 aa7.76□□□□□ -1.17
SS18-220ENST00000582092 CCL13Q99616 98 aa7.76□□□□□ -1.17
SS18-220ENST00000582092 RAB1BQ9H0U4 201 aa7.76□□□□□ -1.17
SS18-220ENST00000582092 FAM234AQ9H0X4 552 aa7.76□□□□□ -1.17
SS18-220ENST00000582092 LIN7CQ9NUP9 197 aaKnown RBP7.76□□□□□ -1.17
SS18-220ENST00000582092 MBD2Q9UBB5 411 aa7.76□□□□□ -1.17
SS18-220ENST00000582092 DUX4Q9UBX2 424 aa7.76□□□□□ -1.17
SS18-220ENST00000582092 LSM5Q9Y4Y9 91 aaKnown RBP7.76□□□□□ -1.17
SS18-220ENST00000582092 CCDC168Q8NDH2 2452 aa7.76□□□□□ -1.17
SS18-220ENST00000582092 IGKV1D-13A0A0B4J2D9 117 aa7.75□□□□□ -1.17
SS18-220ENST00000582092 hADV38S2A0JD32 116 aa7.75□□□□□ -1.17
SS18-220ENST00000582092 H0Y980 276 aa7.75□□□□□ -1.17
SS18-220ENST00000582092 NDUFB3O43676 98 aa7.75□□□□□ -1.17
SS18-220ENST00000582092 TFF1P04155 84 aa7.75□□□□□ -1.17
SS18-220ENST00000582092 IGKV1-13P0DP09 117 aa7.75□□□□□ -1.17
SS18-220ENST00000582092 RPS2P15880 293 aaKnown RBP7.75□□□□□ -1.17
SS18-220ENST00000582092 CXCL2P19875 107 aa7.75□□□□□ -1.17
SS18-220ENST00000582092 P2RX3P56373 397 aa7.75□□□□□ -1.17
SS18-220ENST00000582092 UBA52P62987 128 aaKnown RBP7.75□□□□□ -1.17
SS18-220ENST00000582092 VAMP2P63027 116 aa7.75□□□□□ -1.17
SS18-220ENST00000582092 EIF5AP63241 154 aaKnown RBP7.75□□□□□ -1.17
SS18-220ENST00000582092 HTD2P86397 168 aa7.75□□□□□ -1.17
SS18-220ENST00000582092 EFNB3Q15768 340 aa7.75□□□□□ -1.17
SS18-220ENST00000582092 LTC4SQ16873 150 aa7.75□□□□□ -1.17
SS18-220ENST00000582092 LRRC10Q5BKY1 277 aa7.75□□□□□ -1.17
SS18-220ENST00000582092 PRSS54Q6PEW0 395 aa7.75□□□□□ -1.17
SS18-220ENST00000582092 TEX261Q6UWH6 196 aa7.75□□□□□ -1.17
SS18-220ENST00000582092 Q6ZPA2 131 aa7.75□□□□□ -1.17
SS18-220ENST00000582092 LYZL2Q7Z4W2 148 aa7.75□□□□□ -1.17
SS18-220ENST00000582092 C5orf24Q7Z6I8 188 aa7.75□□□□□ -1.17
SS18-220ENST00000582092 SLC51BQ86UW2 128 aa7.75□□□□□ -1.17
SS18-220ENST00000582092 MUC15Q8N387 334 aa7.75□□□□□ -1.17
SS18-220ENST00000582092 TPRX1Q8N7U7 411 aa7.75□□□□□ -1.17
SS18-220ENST00000582092 LRTM2Q8N967 370 aa7.75□□□□□ -1.17
SS18-220ENST00000582092 OR13A1Q8NGR1 328 aa7.75□□□□□ -1.17
SS18-220ENST00000582092 OR51H1Q8NH63 302 aa7.75□□□□□ -1.17
SS18-220ENST00000582092 GLYATL2Q8WU03 294 aa7.75□□□□□ -1.17
SS18-220ENST00000582092 RBPMSQ93062 196 aaKnown RBP7.75□□□□□ -1.17
SS18-220ENST00000582092 IL22RA2Q969J5 263 aa7.75□□□□□ -1.17
SS18-220ENST00000582092 RAB39BQ96DA2 213 aa7.75□□□□□ -1.17
SS18-220ENST00000582092 RRNAD1Q96FB5 475 aaKnown RBP7.75□□□□□ -1.17
SS18-220ENST00000582092 COQ2Q96H96 371 aa7.75□□□□□ -1.17
SS18-220ENST00000582092 C18orf12Q96KH6 178 aa7.75□□□□□ -1.17
SS18-220ENST00000582092 OR10C1Q96KK4 312 aa7.75□□□□□ -1.17
SS18-220ENST00000582092 ARPC5LQ9BPX5 153 aa7.75□□□□□ -1.17
SS18-220ENST00000582092 NCOR1P1Q9H4R4 102 aa7.75□□□□□ -1.17
SS18-220ENST00000582092 TMEM106BQ9NUM4 274 aa7.75□□□□□ -1.17
SS18-220ENST00000582092 METRNQ9UJH8 293 aa7.75□□□□□ -1.17
SS18-220ENST00000582092 RNF150Q9ULK6 438 aa7.75□□□□□ -1.17
SS18-220ENST00000582092 U3KQ87 197 aa7.75□□□□□ -1.17
SS18-220ENST00000582092 TRAV14DV4A0A0A6YYC5 116 aa7.74□□□□□ -1.17
SS18-220ENST00000582092 IGHV1-69-2A0A0G2JMI3 117 aa7.74□□□□□ -1.17
SS18-220ENST00000582092 F5H0A9 414 aaPredicted RBP7.74□□□□□ -1.17
SS18-220ENST00000582092 TMEM178BH3BS89 294 aa7.74□□□□□ -1.17
SS18-220ENST00000582092 TMPRSS2O15393 492 aa7.74□□□□□ -1.17
SS18-220ENST00000582092 NDUFA2O43678 99 aa7.74□□□□□ -1.17
SS18-220ENST00000582092 ATP6V1G1O75348 118 aa7.74□□□□□ -1.17
SS18-220ENST00000582092 ZNF737O75373 536 aa7.74□□□□□ -1.17
SS18-220ENST00000582092 F2RP25116 425 aa7.74□□□□□ -1.17
SS18-220ENST00000582092 HTR2BP41595 481 aa7.74□□□□□ -1.17
SS18-220ENST00000582092 GPR12P47775 334 aa7.74□□□□□ -1.17
SS18-220ENST00000582092 RAB7AP51149 207 aa7.74□□□□□ -1.17
SS18-220ENST00000582092 AKR1C2P52895 323 aa7.74□□□□□ -1.17
SS18-220ENST00000582092 PAX5Q02548 391 aa7.74□□□□□ -1.17
SS18-220ENST00000582092 RAB32Q13637 225 aa7.74□□□□□ -1.17
SS18-220ENST00000582092 ZNF345Q14585 488 aa7.74□□□□□ -1.17
SS18-220ENST00000582092 ZNF672Q499Z4 452 aaPredicted RBP7.74□□□□□ -1.17
SS18-220ENST00000582092 SPRNQ5BIV9 151 aa7.74□□□□□ -1.17
SS18-220ENST00000582092 FAM201AQ5SY85 155 aa7.74□□□□□ -1.17
SS18-220ENST00000582092 TEX36Q5VZQ5 186 aa7.74□□□□□ -1.17
SS18-220ENST00000582092 STUMQ69YW2 141 aa7.74□□□□□ -1.17
SS18-220ENST00000582092 SPNS3Q6ZMD2 512 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms