RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 CENPVL3A0A0U1RRI6 287 aa11.66□□□□□ -0.54
SKA2-205ENST00000580541 ANKRD20A5PA0PJZ0 165 aa11.66□□□□□ -0.54
SKA2-205ENST00000580541 DISC1C4P0D8 188 aa11.66□□□□□ -0.54
SKA2-205ENST00000580541 RNASEK-C17orf49H0YIS7 233 aa11.66□□□□□ -0.54
SKA2-205ENST00000580541 IGHV1-69P01742 117 aa11.66□□□□□ -0.54
SKA2-205ENST00000580541 FCER2P06734 321 aa11.66□□□□□ -0.54
SKA2-205ENST00000580541 IGHV3-43DP0DP04 118 aa11.66□□□□□ -0.54
SKA2-205ENST00000580541 HOXB4P17483 251 aaPredicted RBP11.66□□□□□ -0.54
SKA2-205ENST00000580541 EPHA1P21709 976 aa11.66□□□□□ -0.54
SKA2-205ENST00000580541 COX7A1P24310 79 aa11.66□□□□□ -0.54
SKA2-205ENST00000580541 HTR1DP28221 377 aa11.66□□□□□ -0.54
SKA2-205ENST00000580541 PPP1CCP36873 323 aaKnown RBP11.66□□□□□ -0.54
SKA2-205ENST00000580541 ARHGDIBP52566 201 aa11.66□□□□□ -0.54
SKA2-205ENST00000580541 KRTAP1-1Q07627 177 aa11.66□□□□□ -0.54
SKA2-205ENST00000580541 MINOS1Q5TGZ0 78 aa11.66□□□□□ -0.54
SKA2-205ENST00000580541 LPCAT3Q6P1A2 487 aa11.66□□□□□ -0.54
SKA2-205ENST00000580541 ARRDC1Q8N5I2 433 aa11.66□□□□□ -0.54
SKA2-205ENST00000580541 OR10V1Q8NGI7 309 aa11.66□□□□□ -0.54
SKA2-205ENST00000580541 BEX2Q9BXY8 128 aa11.66□□□□□ -0.54
SKA2-205ENST00000580541 MS4A7Q9GZW8 240 aaPredicted RBP11.66□□□□□ -0.54
SKA2-205ENST00000580541 MMP28Q9H239 520 aa11.66□□□□□ -0.54
SKA2-205ENST00000580541 RDH8Q9NYR8 311 aa11.66□□□□□ -0.54
SKA2-205ENST00000580541 PIPOXQ9P0Z9 390 aa11.66□□□□□ -0.54
SKA2-205ENST00000580541 ZNF221Q9UK13 617 aa11.66□□□□□ -0.54
SKA2-205ENST00000580541 OR2W1Q9Y3N9 320 aa11.66□□□□□ -0.54
SKA2-205ENST00000580541 TBL2Q9Y4P3 447 aaKnown RBP11.66□□□□□ -0.54
SKA2-205ENST00000580541 MINOS1-NBL1R4GNA1 71 aa11.66□□□□□ -0.54
SKA2-205ENST00000580541 HIVEP2P31629 2446 aa11.66□□□□□ -0.54
SKA2-205ENST00000580541 IGKV1-6A0A0C4DH72 117 aa11.65□□□□□ -0.54
SKA2-205ENST00000580541 FAM172BPA6NC97 362 aa11.65□□□□□ -0.54
SKA2-205ENST00000580541 LEUTXA8MZ59 168 aa11.65□□□□□ -0.54
SKA2-205ENST00000580541 NPFFO15130 113 aa11.65□□□□□ -0.54
SKA2-205ENST00000580541 CD74P04233 296 aa11.65□□□□□ -0.54
SKA2-205ENST00000580541 CD3DP04234 171 aa11.65□□□□□ -0.54
SKA2-205ENST00000580541 FCGR2CP31995 323 aa11.65□□□□□ -0.54
SKA2-205ENST00000580541 RFX2P48378 723 aa11.65□□□□□ -0.54
SKA2-205ENST00000580541 LUMP51884 338 aaPredicted RBP11.65□□□□□ -0.54
SKA2-205ENST00000580541 HERV-K104P61576 105 aa11.65□□□□□ -0.54
SKA2-205ENST00000580541 HERPUD1Q15011 391 aa11.65□□□□□ -0.54
SKA2-205ENST00000580541 PLA1AQ53H76 456 aa11.65□□□□□ -0.54
SKA2-205ENST00000580541 ZNF626Q68DY1 528 aa11.65□□□□□ -0.54
SKA2-205ENST00000580541 SLC25A48Q6ZT89 311 aaKnown RBP11.65□□□□□ -0.54
SKA2-205ENST00000580541 H1FOOQ8IZA3 346 aaPredicted RBP11.65□□□□□ -0.54
SKA2-205ENST00000580541 MALSU1Q96EH3 234 aa11.65□□□□□ -0.54
SKA2-205ENST00000580541 C7orf50Q9BRJ6 194 aaKnown RBP11.65□□□□□ -0.54
SKA2-205ENST00000580541 ABHD14AQ9BUJ0 271 aa11.65□□□□□ -0.54
SKA2-205ENST00000580541 DPM3Q9P2X0 92 aa11.65□□□□□ -0.54
SKA2-205ENST00000580541 SCP2D1Q9UJQ7 156 aa11.65□□□□□ -0.54
SKA2-205ENST00000580541 FAM96BQ9Y3D0 163 aa11.65□□□□□ -0.54
SKA2-205ENST00000580541 TRAV40A0A0B4J280 105 aa11.64□□□□□ -0.55
SKA2-205ENST00000580541 NAP1L6A6NFF2 107 aa11.64□□□□□ -0.55
SKA2-205ENST00000580541 RAB29O14966 203 aa11.64□□□□□ -0.55
SKA2-205ENST00000580541 AVPP01185 164 aa11.64□□□□□ -0.55
SKA2-205ENST00000580541 IL7P13232 177 aa11.64□□□□□ -0.55
SKA2-205ENST00000580541 ECI1P42126 302 aa11.64□□□□□ -0.55
SKA2-205ENST00000580541 GNG10P50151 68 aa11.64□□□□□ -0.55
SKA2-205ENST00000580541 BAK1Q16611 211 aa11.64□□□□□ -0.55
SKA2-205ENST00000580541 HLA-DRB5Q30154 266 aa11.64□□□□□ -0.55
SKA2-205ENST00000580541 CCDC144NLQ6NUI1 221 aa11.64□□□□□ -0.55
SKA2-205ENST00000580541 SCGB3A2Q96PL1 93 aa11.64□□□□□ -0.55
SKA2-205ENST00000580541 S1PR3Q99500 378 aa11.64□□□□□ -0.55
SKA2-205ENST00000580541 PRRT1Q99946 306 aa11.64□□□□□ -0.55
SKA2-205ENST00000580541 SMR3AQ99954 134 aa11.64□□□□□ -0.55
SKA2-205ENST00000580541 C11orf54Q9H0W9 315 aaPredicted RBP11.64□□□□□ -0.55
SKA2-205ENST00000580541 OR1A1Q9P1Q5 309 aa11.64□□□□□ -0.55
SKA2-205ENST00000580541 TLN2Q9Y4G6 2542 aa11.64□□□□□ -0.55
SKA2-205ENST00000580541 OOSP1A8MZH6 123 aa11.63□□□□□ -0.55
SKA2-205ENST00000580541 BUB1B-PAK6H3BSN5 160 aa11.63□□□□□ -0.55
SKA2-205ENST00000580541 LANCL1O43813 399 aa11.63□□□□□ -0.55
SKA2-205ENST00000580541 IGLV1-47P01700 117 aa11.63□□□□□ -0.55
SKA2-205ENST00000580541 AMY2AP04746 511 aa11.63□□□□□ -0.55
SKA2-205ENST00000580541 NFYAP23511 347 aaPredicted RBP11.63□□□□□ -0.55
SKA2-205ENST00000580541 S100GP29377 79 aa11.63□□□□□ -0.55
SKA2-205ENST00000580541 KLRD1Q13241 179 aa11.63□□□□□ -0.55
SKA2-205ENST00000580541 GNMTQ14749 295 aa11.63□□□□□ -0.55
SKA2-205ENST00000580541 CT45A1Q5HYN5 189 aa11.63□□□□□ -0.55
SKA2-205ENST00000580541 HCP5Q6MZN7 132 aa11.63□□□□□ -0.55
SKA2-205ENST00000580541 C1orf229Q6ZS94 237 aaPredicted RBP11.63□□□□□ -0.55
SKA2-205ENST00000580541 PDZD9Q8IXQ8 264 aa11.63□□□□□ -0.55
SKA2-205ENST00000580541 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.63□□□□□ -0.55
SKA2-205ENST00000580541 CT45A3Q8NHU0 189 aa11.63□□□□□ -0.55
SKA2-205ENST00000580541 LEAP2Q969E1 77 aa11.63□□□□□ -0.55
SKA2-205ENST00000580541 TRIM63Q969Q1 353 aa11.63□□□□□ -0.55
SKA2-205ENST00000580541 RPEQ96AT9 228 aa11.63□□□□□ -0.55
SKA2-205ENST00000580541 ZNF2Q9BSG1 426 aaPredicted RBP11.63□□□□□ -0.55
SKA2-205ENST00000580541 MCUBQ9NWR8 336 aa11.63□□□□□ -0.55
SKA2-205ENST00000580541 GAB2Q9UQC2 676 aa11.63□□□□□ -0.55
SKA2-205ENST00000580541 NAV3Q8IVL0 2385 aa11.62□□□□□ -0.55
SKA2-205ENST00000580541 ODF3BA8MYP8 253 aa11.62□□□□□ -0.55
SKA2-205ENST00000580541 M0QYG6 137 aa11.62□□□□□ -0.55
SKA2-205ENST00000580541 TXNL1O43396 289 aa11.62□□□□□ -0.55
SKA2-205ENST00000580541 UPK1BO75841 260 aa11.62□□□□□ -0.55
SKA2-205ENST00000580541 TUSC2O75896 110 aa11.62□□□□□ -0.55
SKA2-205ENST00000580541 PPYP01298 95 aa11.62□□□□□ -0.55
SKA2-205ENST00000580541 IGHV3-7P01780 117 aa11.62□□□□□ -0.55
SKA2-205ENST00000580541 GAPDHP04406 335 aaKnown RBP11.62□□□□□ -0.55
SKA2-205ENST00000580541 OR8U9P0C7N5 309 aa11.62□□□□□ -0.55
SKA2-205ENST00000580541 IGHV4-38-2P0DP08 117 aa11.62□□□□□ -0.55
SKA2-205ENST00000580541 GPR12P47775 334 aa11.62□□□□□ -0.55
SKA2-205ENST00000580541 DEFA1P59665 94 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms