RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 H7C417 338 aa6.52□□□□□ -1.37
CDH11-216ENST00000569128 SOCS1O15524 211 aa6.52□□□□□ -1.37
CDH11-216ENST00000569128 RGS5O15539 181 aa6.52□□□□□ -1.37
CDH11-216ENST00000569128 NOS1APO75052 506 aaPredicted RBP6.52□□□□□ -1.37
CDH11-216ENST00000569128 RP2O75695 350 aa6.52□□□□□ -1.37
CDH11-216ENST00000569128 CLPXO76031 633 aa6.52□□□□□ -1.37
CDH11-216ENST00000569128 NXPH2O95156 264 aa6.52□□□□□ -1.37
CDH11-216ENST00000569128 CYB5AP00167 134 aa6.52□□□□□ -1.37
CDH11-216ENST00000569128 IGHV4-39P01824 125 aa6.52□□□□□ -1.37
CDH11-216ENST00000569128 LIPFP07098 398 aa6.52□□□□□ -1.37
CDH11-216ENST00000569128 FAM106CPP0CH98 169 aa6.52□□□□□ -1.37
CDH11-216ENST00000569128 PTHLHP12272 177 aa6.52□□□□□ -1.37
CDH11-216ENST00000569128 DAOP14920 347 aa6.52□□□□□ -1.37
CDH11-216ENST00000569128 MGMTP16455 207 aa6.52□□□□□ -1.37
CDH11-216ENST00000569128 PRKACAP17612 351 aa6.52□□□□□ -1.37
CDH11-216ENST00000569128 GLRA1P23415 457 aa6.52□□□□□ -1.37
CDH11-216ENST00000569128 VEGFCP49767 419 aa6.52□□□□□ -1.37
CDH11-216ENST00000569128 TAF9Q16594 264 aa6.52□□□□□ -1.37
CDH11-216ENST00000569128 AVPI1Q5T686 147 aa6.52□□□□□ -1.37
CDH11-216ENST00000569128 ACP7Q6ZNF0 438 aa6.52□□□□□ -1.37
CDH11-216ENST00000569128 FAM58AQ8N1B3 248 aa6.52□□□□□ -1.37
CDH11-216ENST00000569128 OSR2Q8N2R0 312 aa6.52□□□□□ -1.37
CDH11-216ENST00000569128 NEXN-AS1Q8NBZ9 246 aa6.52□□□□□ -1.37
CDH11-216ENST00000569128 OR4M1Q8NGD0 313 aa6.52□□□□□ -1.37
CDH11-216ENST00000569128 OR51T1Q8NGJ9 327 aa6.52□□□□□ -1.37
CDH11-216ENST00000569128 OR11L1Q8NGX0 322 aa6.52□□□□□ -1.37
CDH11-216ENST00000569128 OR10Z1Q8NGY1 313 aa6.52□□□□□ -1.37
CDH11-216ENST00000569128 KCNG3Q8TAE7 436 aa6.52□□□□□ -1.37
CDH11-216ENST00000569128 ACOT12Q8WYK0 555 aa6.52□□□□□ -1.37
CDH11-216ENST00000569128 EMG1Q92979 244 aaKnown RBP6.52□□□□□ -1.37
CDH11-216ENST00000569128 CPNE2Q96FN4 548 aaPredicted RBP6.52□□□□□ -1.37
CDH11-216ENST00000569128 ALKBH7Q9BT30 221 aaPredicted RBP6.52□□□□□ -1.37
CDH11-216ENST00000569128 KRTAP4-5Q9BYR2 181 aa6.52□□□□□ -1.37
CDH11-216ENST00000569128 ATG5Q9H1Y0 275 aa6.52□□□□□ -1.37
CDH11-216ENST00000569128 HES4Q9HCC6 221 aa6.52□□□□□ -1.37
CDH11-216ENST00000569128 HMG20AQ9NP66 347 aa6.52□□□□□ -1.37
CDH11-216ENST00000569128 YAE1D1Q9NRH1 226 aa6.52□□□□□ -1.37
CDH11-216ENST00000569128 TMEM106BQ9NUM4 274 aa6.52□□□□□ -1.37
CDH11-216ENST00000569128 RHBDL2Q9NX52 303 aa6.52□□□□□ -1.37
CDH11-216ENST00000569128 IL36GQ9NZH8 169 aa6.52□□□□□ -1.37
CDH11-216ENST00000569128 ELF5Q9UKW6 265 aaPredicted RBP6.52□□□□□ -1.37
CDH11-216ENST00000569128 RAB22AQ9UL26 194 aa6.52□□□□□ -1.37
CDH11-216ENST00000569128 POLDIP2Q9Y2S7 368 aa6.52□□□□□ -1.37
CDH11-216ENST00000569128 A0A1B0GW55 424 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 RFPL4AA6NLU0 287 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 FAM25AB3EWG3 89 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 FAM25CB3EWG5 89 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 FAM25GB3EWG6 89 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 RFPL4AL1F8VTS6 287 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 GEMIN2O14893 280 aaKnown RBP6.51□□□□□ -1.37
CDH11-216ENST00000569128 CLN5O75503 358 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 GYPAP02724 150 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 ACAA1P09110 424 aaPredicted RBP6.51□□□□□ -1.37
CDH11-216ENST00000569128 UBBP0CG47 229 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 DUX4L2P0CJ85 424 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 DUX4L3P0CJ86 424 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 DUX4L4P0CJ87 422 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 DUX4L5P0CJ88 424 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 DUX4L6P0CJ89 424 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 DUX4L7P0CJ90 424 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 IGHV4-30-4P0DP06 118 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 RRASP10301 218 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 PSG2P11465 335 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 GTF2F2P13984 249 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 GABRR1P24046 479 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 CDK2P24941 298 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 CFHR2P36980 270 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 AMTP48728 403 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 EFNA4P52798 201 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 ART1P52961 327 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 TMEM50BP56557 158 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 RBM11P57052 281 aaKnown RBP6.51□□□□□ -1.37
CDH11-216ENST00000569128 FGF12P61328 243 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 RPS27AP62979 156 aaKnown RBP6.51□□□□□ -1.37
CDH11-216ENST00000569128 UBE2NLQ5JXB2 153 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 OLFML2AQ68BL7 652 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 ELP2Q6IA86 826 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 Q6P435 159 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 CNIH2Q6PI25 160 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 DUX4L9Q6RFH8 374 aaPredicted RBP6.51□□□□□ -1.37
CDH11-216ENST00000569128 OR2W3Q7Z3T1 314 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 CD177Q8N6Q3 437 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 CHPT1Q8WUD6 406 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 AP3S1Q92572 193 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 RDH5Q92781 318 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 ZNF48Q96MX3 618 aaPredicted RBP6.51□□□□□ -1.37
CDH11-216ENST00000569128 TMEM59Q9BXS4 323 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 ABCG5Q9H222 651 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 GHRLQ9UBU3 117 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 DUX4Q9UBX2 424 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 ST3GAL6Q9Y274 331 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 ETV7Q9Y603 341 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 NBPF19A0A087WUL8 3843 aa6.51□□□□□ -1.37
CDH11-216ENST00000569128 TANC2Q9HCD6 1990 aa6.5□□□□□ -1.37
CDH11-216ENST00000569128 IGKV1D-17A0A075B6S4 117 aa6.5□□□□□ -1.37
CDH11-216ENST00000569128 PPIAL4EA0A075B759 164 aa6.5□□□□□ -1.37
CDH11-216ENST00000569128 FOXI3A8MTJ6 420 aaPredicted RBP6.5□□□□□ -1.37
CDH11-216ENST00000569128 INAFM1C9JVW0 142 aa6.5□□□□□ -1.37
CDH11-216ENST00000569128 PPIAL4DF5H284 164 aa6.5□□□□□ -1.37
CDH11-216ENST00000569128 K7EQM0 130 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms