RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 ERVFRD-1P60508 538 aa8.54□□□□□ -1.04
CDH3-210ENST00000569117 ARF6P62330 175 aa8.54□□□□□ -1.04
CDH3-210ENST00000569117 SRSF2Q01130 221 aaKnown RBP8.54□□□□□ -1.04
CDH3-210ENST00000569117 GNMTQ14749 295 aa8.54□□□□□ -1.04
CDH3-210ENST00000569117 Q3ZCU0 254 aa8.54□□□□□ -1.04
CDH3-210ENST00000569117 IGSF11Q5DX21 431 aa8.54□□□□□ -1.04
CDH3-210ENST00000569117 RNASE10Q5GAN6 216 aaKnown RBP8.54□□□□□ -1.04
CDH3-210ENST00000569117 VAX1Q5SQQ9 334 aa8.54□□□□□ -1.04
CDH3-210ENST00000569117 STEAP1BQ6NZ63 245 aa8.54□□□□□ -1.04
CDH3-210ENST00000569117 OVCH2Q7RTZ1 564 aa8.54□□□□□ -1.04
CDH3-210ENST00000569117 VMO1Q7Z5L0 202 aa8.54□□□□□ -1.04
CDH3-210ENST00000569117 C5orf24Q7Z6I8 188 aa8.54□□□□□ -1.04
CDH3-210ENST00000569117 LYSMD2Q8IV50 215 aa8.54□□□□□ -1.04
CDH3-210ENST00000569117 TOMM5Q8N4H5 51 aa8.54□□□□□ -1.04
CDH3-210ENST00000569117 RFESDQ8TAC1 157 aa8.54□□□□□ -1.04
CDH3-210ENST00000569117 IL1F10Q8WWZ1 152 aa8.54□□□□□ -1.04
CDH3-210ENST00000569117 TOLLIPQ9H0E2 274 aa8.54□□□□□ -1.04
CDH3-210ENST00000569117 NECAP2Q9NVZ3 263 aa8.54□□□□□ -1.04
CDH3-210ENST00000569117 OR1A1Q9P1Q5 309 aa8.54□□□□□ -1.04
CDH3-210ENST00000569117 SLC23A1Q9UHI7 598 aa8.54□□□□□ -1.04
CDH3-210ENST00000569117 H3BS24 57 aa8.53□□□□□ -1.04
CDH3-210ENST00000569117 M0QYG6 137 aa8.53□□□□□ -1.04
CDH3-210ENST00000569117 TOX4O94842 621 aa8.53□□□□□ -1.04
CDH3-210ENST00000569117 AKAIN1P0CW23 69 aa8.53□□□□□ -1.04
CDH3-210ENST00000569117 ZBTB25P24278 435 aa8.53□□□□□ -1.04
CDH3-210ENST00000569117 OR3A3P47888 321 aa8.53□□□□□ -1.04
CDH3-210ENST00000569117 INPP1P49441 399 aa8.53□□□□□ -1.04
CDH3-210ENST00000569117 DYRK1AQ13627 763 aa8.53□□□□□ -1.04
CDH3-210ENST00000569117 MEF2DQ14814 521 aa8.53□□□□□ -1.04
CDH3-210ENST00000569117 LTC4SQ16873 150 aa8.53□□□□□ -1.04
CDH3-210ENST00000569117 TMEM95Q3KNT9 176 aa8.53□□□□□ -1.04
CDH3-210ENST00000569117 TOR2AQ5JU69 321 aa8.53□□□□□ -1.04
CDH3-210ENST00000569117 LY6G6FQ5SQ64 297 aa8.53□□□□□ -1.04
CDH3-210ENST00000569117 NCR3LG1Q68D85 454 aa8.53□□□□□ -1.04
CDH3-210ENST00000569117 ZNF782Q6ZMW2 699 aaPredicted RBP8.53□□□□□ -1.04
CDH3-210ENST00000569117 H1FOOQ8IZA3 346 aaPredicted RBP8.53□□□□□ -1.04
CDH3-210ENST00000569117 Q8N1Y9 231 aa8.53□□□□□ -1.04
CDH3-210ENST00000569117 ARRDC1Q8N5I2 433 aa8.53□□□□□ -1.04
CDH3-210ENST00000569117 ZBTB34Q8NCN2 500 aa8.53□□□□□ -1.04
CDH3-210ENST00000569117 OR4C16Q8NGL9 310 aa8.53□□□□□ -1.04
CDH3-210ENST00000569117 OR10J5Q8NHC4 309 aa8.53□□□□□ -1.04
CDH3-210ENST00000569117 BORCS5Q969J3 196 aa8.53□□□□□ -1.04
CDH3-210ENST00000569117 UPRTQ96BW1 309 aa8.53□□□□□ -1.04
CDH3-210ENST00000569117 TBX15Q96SF7 602 aa8.53□□□□□ -1.04
CDH3-210ENST00000569117 TMEM133Q9H2Q1 129 aa8.53□□□□□ -1.04
CDH3-210ENST00000569117 OR2S2Q9NQN1 319 aa8.53□□□□□ -1.04
CDH3-210ENST00000569117 SIRT7Q9NRC8 400 aa8.53□□□□□ -1.04
CDH3-210ENST00000569117 EHFQ9NZC4 300 aa8.53□□□□□ -1.04
CDH3-210ENST00000569117 GNG12Q9UBI6 72 aa8.53□□□□□ -1.04
CDH3-210ENST00000569117 IGHV3-43A0A0B4J1X8 118 aa8.52□□□□□ -1.05
CDH3-210ENST00000569117 BET1O15155 118 aa8.52□□□□□ -1.05
CDH3-210ENST00000569117 HSPA12AO43301 675 aa8.52□□□□□ -1.05
CDH3-210ENST00000569117 CD5LO43866 347 aa8.52□□□□□ -1.05
CDH3-210ENST00000569117 YPEL1O60688 119 aa8.52□□□□□ -1.05
CDH3-210ENST00000569117 TUSC2O75896 110 aa8.52□□□□□ -1.05
CDH3-210ENST00000569117 RGS11O94810 467 aa8.52□□□□□ -1.05
CDH3-210ENST00000569117 RAB3DO95716 219 aa8.52□□□□□ -1.05
CDH3-210ENST00000569117 PMP2P02689 132 aa8.52□□□□□ -1.05
CDH3-210ENST00000569117 OR5H8P0DN80 308 aa8.52□□□□□ -1.05
CDH3-210ENST00000569117 IGHV3-43DP0DP04 118 aa8.52□□□□□ -1.05
CDH3-210ENST00000569117 FOSL1P15407 271 aa8.52□□□□□ -1.05
CDH3-210ENST00000569117 NFYBP25208 207 aa8.52□□□□□ -1.05
CDH3-210ENST00000569117 FAUP35544 74 aaKnown RBP8.52□□□□□ -1.05
CDH3-210ENST00000569117 PPP1CCP36873 323 aaKnown RBP8.52□□□□□ -1.05
CDH3-210ENST00000569117 ZNF57Q68EA5 555 aaPredicted RBP8.52□□□□□ -1.05
CDH3-210ENST00000569117 ZNF660Q6AZW8 331 aaPredicted RBP8.52□□□□□ -1.05
CDH3-210ENST00000569117 C8orf31Q8N9H6 132 aa8.52□□□□□ -1.05
CDH3-210ENST00000569117 ZNF439Q8NDP4 499 aa8.52□□□□□ -1.05
CDH3-210ENST00000569117 OR52L2PQ8NGH6 319 aa8.52□□□□□ -1.05
CDH3-210ENST00000569117 OR4D10Q8NGI6 311 aa8.52□□□□□ -1.05
CDH3-210ENST00000569117 FAM216AQ8WUB2 273 aa8.52□□□□□ -1.05
CDH3-210ENST00000569117 TNFRSF14Q92956 283 aa8.52□□□□□ -1.05
CDH3-210ENST00000569117 YPEL2Q96QA6 119 aa8.52□□□□□ -1.05
CDH3-210ENST00000569117 C7orf50Q9BRJ6 194 aaKnown RBP8.52□□□□□ -1.05
CDH3-210ENST00000569117 GINS4Q9BRT9 223 aa8.52□□□□□ -1.05
CDH3-210ENST00000569117 PCGF1Q9BSM1 259 aa8.52□□□□□ -1.05
CDH3-210ENST00000569117 SUCNR1Q9BXA5 334 aa8.52□□□□□ -1.05
CDH3-210ENST00000569117 TINAGL1Q9GZM7 467 aaPredicted RBP8.52□□□□□ -1.05
CDH3-210ENST00000569117 PALMDQ9NP74 551 aa8.52□□□□□ -1.05
CDH3-210ENST00000569117 ABCB10Q9NRK6 738 aa8.52□□□□□ -1.05
CDH3-210ENST00000569117 SLC2A8Q9NY64 477 aa8.52□□□□□ -1.05
CDH3-210ENST00000569117 RDH8Q9NYR8 311 aa8.52□□□□□ -1.05
CDH3-210ENST00000569117 ZNF69Q9UC07 566 aa8.52□□□□□ -1.05
CDH3-210ENST00000569117 AUP1Q9Y679 476 aa8.52□□□□□ -1.05
CDH3-210ENST00000569117 X6R8D5 127 aa8.52□□□□□ -1.05
CDH3-210ENST00000569117 ACANP16112 2415 aa8.52□□□□□ -1.05
CDH3-210ENST00000569117 IGHV2-26A0A0B4J1V2 119 aa8.51□□□□□ -1.05
CDH3-210ENST00000569117 FAM172BPA6NC97 362 aa8.51□□□□□ -1.05
CDH3-210ENST00000569117 ODF3BA8MYP8 253 aa8.51□□□□□ -1.05
CDH3-210ENST00000569117 RNASEK-C17orf49H0YIS7 233 aa8.51□□□□□ -1.05
CDH3-210ENST00000569117 ITGB1BP1O14713 200 aa8.51□□□□□ -1.05
CDH3-210ENST00000569117 ZNF735P0CB33 412 aa8.51□□□□□ -1.05
CDH3-210ENST00000569117 RFX2P48378 723 aa8.51□□□□□ -1.05
CDH3-210ENST00000569117 DLX1P56177 255 aa8.51□□□□□ -1.05
CDH3-210ENST00000569117 KLRD1Q13241 179 aa8.51□□□□□ -1.05
CDH3-210ENST00000569117 MORN2Q502X0 79 aa8.51□□□□□ -1.05
CDH3-210ENST00000569117 UTF1Q5T230 341 aa8.51□□□□□ -1.05
CDH3-210ENST00000569117 ZNF626Q68DY1 528 aa8.51□□□□□ -1.05
CDH3-210ENST00000569117 HCP5Q6MZN7 132 aa8.51□□□□□ -1.05
CDH3-210ENST00000569117 FAM53AQ6NSI3 398 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms