RNA–Protein interactions for RNA: ENST00000568539.1

SF3B3-212, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-212ENST00000568539 FAM172BPA6NC97 362 aa6.89□□□□□ -1.31
SF3B3-212ENST00000568539 M0QYG6 137 aa6.89□□□□□ -1.31
SF3B3-212ENST00000568539 HSPA12AO43301 675 aa6.89□□□□□ -1.31
SF3B3-212ENST00000568539 LY6G6DO95868 133 aa6.89□□□□□ -1.31
SF3B3-212ENST00000568539 IGHV3-7P01780 117 aa6.89□□□□□ -1.31
SF3B3-212ENST00000568539 OR5H8P0DN80 308 aa6.89□□□□□ -1.31
SF3B3-212ENST00000568539 COX7A1P24310 79 aa6.89□□□□□ -1.31
SF3B3-212ENST00000568539 CEACAM6P40199 344 aa6.89□□□□□ -1.31
SF3B3-212ENST00000568539 OR3A3P47888 321 aa6.89□□□□□ -1.31
SF3B3-212ENST00000568539 KLRD1Q13241 179 aa6.89□□□□□ -1.31
SF3B3-212ENST00000568539 DYRK1AQ13627 763 aa6.89□□□□□ -1.31
SF3B3-212ENST00000568539 Q3ZCU0 254 aa6.89□□□□□ -1.31
SF3B3-212ENST00000568539 RNASE10Q5GAN6 216 aaKnown RBP6.89□□□□□ -1.31
SF3B3-212ENST00000568539 KLF17Q5JT82 389 aaPredicted RBP6.89□□□□□ -1.31
SF3B3-212ENST00000568539 LY6G6FQ5SQ64 297 aa6.89□□□□□ -1.31
SF3B3-212ENST00000568539 TRIQKQ629K1 86 aa6.89□□□□□ -1.31
SF3B3-212ENST00000568539 ZNF660Q6AZW8 331 aaPredicted RBP6.89□□□□□ -1.31
SF3B3-212ENST00000568539 STEAP1BQ6NZ63 245 aa6.89□□□□□ -1.31
SF3B3-212ENST00000568539 H1FOOQ8IZA3 346 aaPredicted RBP6.89□□□□□ -1.31
SF3B3-212ENST00000568539 ABHD12Q8N2K0 398 aa6.89□□□□□ -1.31
SF3B3-212ENST00000568539 PNKDQ8N490 385 aa6.89□□□□□ -1.31
SF3B3-212ENST00000568539 TOMM5Q8N4H5 51 aa6.89□□□□□ -1.31
SF3B3-212ENST00000568539 C8orf31Q8N9H6 132 aa6.89□□□□□ -1.31
SF3B3-212ENST00000568539 OR11H6Q8NGC7 330 aa6.89□□□□□ -1.31
SF3B3-212ENST00000568539 OR4D10Q8NGI6 311 aa6.89□□□□□ -1.31
SF3B3-212ENST00000568539 OR13D1Q8NGV5 346 aa6.89□□□□□ -1.31
SF3B3-212ENST00000568539 OR10J5Q8NHC4 309 aa6.89□□□□□ -1.31
SF3B3-212ENST00000568539 LEAP2Q969E1 77 aa6.89□□□□□ -1.31
SF3B3-212ENST00000568539 LHX4Q969G2 390 aa6.89□□□□□ -1.31
SF3B3-212ENST00000568539 GINS4Q9BRT9 223 aa6.89□□□□□ -1.31
SF3B3-212ENST00000568539 CLEC7AQ9BXN2 247 aa6.89□□□□□ -1.31
SF3B3-212ENST00000568539 TINAGL1Q9GZM7 467 aaPredicted RBP6.89□□□□□ -1.31
SF3B3-212ENST00000568539 PARP12Q9H0J9 701 aaKnown RBP6.89□□□□□ -1.31
SF3B3-212ENST00000568539 HEXA-AS1Q9H8Q6 139 aa6.89□□□□□ -1.31
SF3B3-212ENST00000568539 RDH8Q9NYR8 311 aa6.89□□□□□ -1.31
SF3B3-212ENST00000568539 EHFQ9NZC4 300 aa6.89□□□□□ -1.31
SF3B3-212ENST00000568539 PSG11Q9UQ72 335 aa6.89□□□□□ -1.31
SF3B3-212ENST00000568539 PRRC2AP48634 2157 aaKnown RBP6.89□□□□□ -1.31
SF3B3-212ENST00000568539 AKAP6Q13023 2319 aa6.89□□□□□ -1.31
SF3B3-212ENST00000568539 NBEAL1Q6ZS30 2694 aa6.89□□□□□ -1.31
SF3B3-212ENST00000568539 TRAV40A0A0B4J280 105 aa6.88□□□□□ -1.31
SF3B3-212ENST00000568539 CENPVL3A0A0U1RRI6 287 aa6.88□□□□□ -1.31
SF3B3-212ENST00000568539 A8MV72 311 aaPredicted RBP6.88□□□□□ -1.31
SF3B3-212ENST00000568539 ODF3BA8MYP8 253 aa6.88□□□□□ -1.31
SF3B3-212ENST00000568539 J3QR06 171 aa6.88□□□□□ -1.31
SF3B3-212ENST00000568539 ITGB1BP1O14713 200 aa6.88□□□□□ -1.31
SF3B3-212ENST00000568539 SLC31A2O15432 143 aa6.88□□□□□ -1.31
SF3B3-212ENST00000568539 UPK1BO75841 260 aa6.88□□□□□ -1.31
SF3B3-212ENST00000568539 TUSC2O75896 110 aa6.88□□□□□ -1.31
SF3B3-212ENST00000568539 RGS11O94810 467 aa6.88□□□□□ -1.31
SF3B3-212ENST00000568539 RAB3DO95716 219 aa6.88□□□□□ -1.31
SF3B3-212ENST00000568539 FSHBP01225 129 aa6.88□□□□□ -1.31
SF3B3-212ENST00000568539 IGLV1-47P01700 117 aa6.88□□□□□ -1.31
SF3B3-212ENST00000568539 AKAIN1P0CW23 69 aa6.88□□□□□ -1.31
SF3B3-212ENST00000568539 NFYAP23511 347 aaPredicted RBP6.88□□□□□ -1.31
SF3B3-212ENST00000568539 FCGR2CP31995 323 aa6.88□□□□□ -1.31
SF3B3-212ENST00000568539 GNG10P50151 68 aa6.88□□□□□ -1.31
SF3B3-212ENST00000568539 UBE2E1P51965 193 aa6.88□□□□□ -1.31
SF3B3-212ENST00000568539 ZNF134P52741 427 aa6.88□□□□□ -1.31
SF3B3-212ENST00000568539 AP3S2P59780 193 aa6.88□□□□□ -1.31
SF3B3-212ENST00000568539 IFITM3Q01628 133 aa6.88□□□□□ -1.31
SF3B3-212ENST00000568539 CT45A1Q5HYN5 189 aa6.88□□□□□ -1.31
SF3B3-212ENST00000568539 ZNF626Q68DY1 528 aa6.88□□□□□ -1.31
SF3B3-212ENST00000568539 ZNF57Q68EA5 555 aaPredicted RBP6.88□□□□□ -1.31
SF3B3-212ENST00000568539 FAAP20Q6NZ36 180 aa6.88□□□□□ -1.31
SF3B3-212ENST00000568539 DHRS11Q6UWP2 260 aa6.88□□□□□ -1.31
SF3B3-212ENST00000568539 PDZD9Q8IXQ8 264 aa6.88□□□□□ -1.31
SF3B3-212ENST00000568539 ARRDC1Q8N5I2 433 aa6.88□□□□□ -1.31
SF3B3-212ENST00000568539 BEND2Q8NDZ0 799 aa6.88□□□□□ -1.31
SF3B3-212ENST00000568539 OR4C16Q8NGL9 310 aa6.88□□□□□ -1.31
SF3B3-212ENST00000568539 OR9G1Q8NH87 305 aa6.88□□□□□ -1.31
SF3B3-212ENST00000568539 CT45A3Q8NHU0 189 aa6.88□□□□□ -1.31
SF3B3-212ENST00000568539 ZNF596Q8TC21 504 aa6.88□□□□□ -1.31
SF3B3-212ENST00000568539 GIMAP1Q8WWP7 306 aa6.88□□□□□ -1.31
SF3B3-212ENST00000568539 EDARADDQ8WWZ3 215 aa6.88□□□□□ -1.31
SF3B3-212ENST00000568539 DEDD2Q8WXF8 326 aa6.88□□□□□ -1.31
SF3B3-212ENST00000568539 HRASLSQ9HDD0 168 aa6.88□□□□□ -1.31
SF3B3-212ENST00000568539 YAE1D1Q9NRH1 226 aa6.88□□□□□ -1.31
SF3B3-212ENST00000568539 ZNRD1Q9P1U0 126 aa6.88□□□□□ -1.31
SF3B3-212ENST00000568539 ZNF69Q9UC07 566 aa6.88□□□□□ -1.31
SF3B3-212ENST00000568539 IGHV1-69DA0A0B4J2H0 117 aa6.87□□□□□ -1.31
SF3B3-212ENST00000568539 A0A1W2PPE3 182 aa6.87□□□□□ -1.31
SF3B3-212ENST00000568539 PLA2G10O15496 165 aa6.87□□□□□ -1.31
SF3B3-212ENST00000568539 EIF4EBP3O60516 100 aaPredicted RBP6.87□□□□□ -1.31
SF3B3-212ENST00000568539 PPYP01298 95 aa6.87□□□□□ -1.31
SF3B3-212ENST00000568539 IGHV1-69P01742 117 aa6.87□□□□□ -1.31
SF3B3-212ENST00000568539 AMY2AP04746 511 aa6.87□□□□□ -1.31
SF3B3-212ENST00000568539 ZNF735P0CB33 412 aa6.87□□□□□ -1.31
SF3B3-212ENST00000568539 IGHV4-38-2P0DP08 117 aa6.87□□□□□ -1.31
SF3B3-212ENST00000568539 AADACP22760 399 aa6.87□□□□□ -1.31
SF3B3-212ENST00000568539 INPP1P49441 399 aa6.87□□□□□ -1.31
SF3B3-212ENST00000568539 PRRX1P54821 245 aa6.87□□□□□ -1.31
SF3B3-212ENST00000568539 MEF2DQ14814 521 aa6.87□□□□□ -1.31
SF3B3-212ENST00000568539 GPR157Q5UAW9 335 aa6.87□□□□□ -1.31
SF3B3-212ENST00000568539 CLEC9AQ6UXN8 241 aa6.87□□□□□ -1.31
SF3B3-212ENST00000568539 SLC25A48Q6ZT89 311 aaKnown RBP6.87□□□□□ -1.31
SF3B3-212ENST00000568539 REC114Q7Z4M0 266 aa6.87□□□□□ -1.31
SF3B3-212ENST00000568539 LDLRAD3Q86YD5 345 aa6.87□□□□□ -1.31
SF3B3-212ENST00000568539 LINC00311Q8N616 119 aa6.87□□□□□ -1.31
SF3B3-212ENST00000568539 OR2AK2Q8NG84 335 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms