RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 OR2T10Q8NGZ9 312 aa13.33□□□□□ -0.28
COMMD4-215ENST00000566843 OR51H1Q8NH63 302 aa13.33□□□□□ -0.28
COMMD4-215ENST00000566843 PARLQ9H300 379 aa13.33□□□□□ -0.28
COMMD4-215ENST00000566843 OR51I2Q9H344 312 aa13.33□□□□□ -0.28
COMMD4-215ENST00000566843 RARRES3Q9UL19 164 aa13.33□□□□□ -0.28
COMMD4-215ENST00000566843 MMP7P09237 267 aaPredicted RBP13.33□□□□□ -0.28
COMMD4-215ENST00000566843 FGF5P12034 268 aa13.33□□□□□ -0.28
COMMD4-215ENST00000566843 PSMB3P49720 205 aa13.33□□□□□ -0.28
COMMD4-215ENST00000566843 RIPPLY2Q5TAB7 128 aa13.33□□□□□ -0.28
COMMD4-215ENST00000566843 AAED1Q7RTV5 226 aa13.33□□□□□ -0.28
COMMD4-215ENST00000566843 GBGT1Q8N5D6 347 aa13.33□□□□□ -0.28
COMMD4-215ENST00000566843 RPUSD4Q96CM3 377 aaKnown RBP13.33□□□□□ -0.28
COMMD4-215ENST00000566843 IL36RNQ9UBH0 155 aa13.33□□□□□ -0.28
COMMD4-215ENST00000566843 FUT9Q9Y231 359 aa13.33□□□□□ -0.28
COMMD4-215ENST00000566843 KIAA2026Q5HYC2 2103 aa13.32□□□□□ -0.28
COMMD4-215ENST00000566843 LOC102723996A0A087X1L8 192 aa13.32□□□□□ -0.28
COMMD4-215ENST00000566843 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.32□□□□□ -0.28
COMMD4-215ENST00000566843 ELLP55199 621 aaPredicted RBP13.32□□□□□ -0.28
COMMD4-215ENST00000566843 ERVFC1-1P60608 527 aa13.32□□□□□ -0.28
COMMD4-215ENST00000566843 CEACAM16Q2WEN9 425 aa13.32□□□□□ -0.28
COMMD4-215ENST00000566843 ALKBH2Q6NS38 261 aa13.32□□□□□ -0.28
COMMD4-215ENST00000566843 MRPL14Q6P1L8 145 aaKnown RBP13.32□□□□□ -0.28
COMMD4-215ENST00000566843 TMEM37Q8WXS4 190 aa13.32□□□□□ -0.28
COMMD4-215ENST00000566843 ALKBH3Q96Q83 286 aaPredicted RBP13.32□□□□□ -0.28
COMMD4-215ENST00000566843 MTCH1Q9NZJ7 389 aa13.32□□□□□ -0.28
COMMD4-215ENST00000566843 SDK1Q7Z5N4 2213 aa13.32□□□□□ -0.28
COMMD4-215ENST00000566843 NPIPB11E5RHQ5 1161 aa13.32□□□□□ -0.28
COMMD4-215ENST00000566843 CELA2AP08217 269 aa13.32□□□□□ -0.28
COMMD4-215ENST00000566843 IDH3GP51553 393 aaPredicted RBP13.32□□□□□ -0.28
COMMD4-215ENST00000566843 B3GALT5-AS1P59052 145 aa13.32□□□□□ -0.28
COMMD4-215ENST00000566843 C1orf194Q5T5A4 169 aa13.32□□□□□ -0.28
COMMD4-215ENST00000566843 C20orf204Q6ZNR8 217 aa13.32□□□□□ -0.28
COMMD4-215ENST00000566843 OR56B2PQ8NGI1 322 aa13.32□□□□□ -0.28
COMMD4-215ENST00000566843 OR10V1Q8NGI7 309 aa13.32□□□□□ -0.28
COMMD4-215ENST00000566843 NEK7Q8TDX7 302 aa13.32□□□□□ -0.28
COMMD4-215ENST00000566843 GPR35Q9HC97 309 aa13.32□□□□□ -0.28
COMMD4-215ENST00000566843 MANBALQ9NQG1 85 aa13.32□□□□□ -0.28
COMMD4-215ENST00000566843 MYO15AQ9UKN7 3530 aa13.31□□□□□ -0.28
COMMD4-215ENST00000566843 TNRC6BQ9UPQ9 1833 aaKnown RBP13.31□□□□□ -0.28
COMMD4-215ENST00000566843 KIR2DL5BA0A0G2JN68 375 aa13.31□□□□□ -0.28
COMMD4-215ENST00000566843 KIR2DL5BA0A0G2JPC4 375 aa13.31□□□□□ -0.28
COMMD4-215ENST00000566843 CTXND1A0A1B0GTU2 59 aa13.31□□□□□ -0.28
COMMD4-215ENST00000566843 A0A1W2PPQ1 181 aa13.31□□□□□ -0.28
COMMD4-215ENST00000566843 VENTXO95231 258 aa13.31□□□□□ -0.28
COMMD4-215ENST00000566843 IGLV2-14P01704 120 aa13.31□□□□□ -0.28
COMMD4-215ENST00000566843 GYPAP02724 150 aa13.31□□□□□ -0.28
COMMD4-215ENST00000566843 SLC38A11Q08AI6 406 aa13.31□□□□□ -0.28
COMMD4-215ENST00000566843 RTP5Q14D33 572 aa13.31□□□□□ -0.28
COMMD4-215ENST00000566843 TEX38Q6PEX7 206 aa13.31□□□□□ -0.28
COMMD4-215ENST00000566843 TMEM14EPQ6UXP3 125 aa13.31□□□□□ -0.28
COMMD4-215ENST00000566843 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.31□□□□□ -0.28
COMMD4-215ENST00000566843 LINC00596Q86U02 117 aa13.31□□□□□ -0.28
COMMD4-215ENST00000566843 MKXQ8IYA7 352 aa13.31□□□□□ -0.28
COMMD4-215ENST00000566843 KIR2DL5AQ8N109 375 aa13.31□□□□□ -0.28
COMMD4-215ENST00000566843 OR10J5Q8NHC4 309 aa13.31□□□□□ -0.28
COMMD4-215ENST00000566843 ERRFI1Q9UJM3 462 aaPredicted RBP13.31□□□□□ -0.28
COMMD4-215ENST00000566843 M0R143 59 aa13.3□□□□□ -0.28
COMMD4-215ENST00000566843 LCN2P80188 198 aa13.3□□□□□ -0.28
COMMD4-215ENST00000566843 CEACAM21Q3KPI0 293 aa13.3□□□□□ -0.28
COMMD4-215ENST00000566843 MRPL41Q8IXM3 137 aaKnown RBP13.3□□□□□ -0.28
COMMD4-215ENST00000566843 CRIM1Q9NZV1 1036 aa13.3□□□□□ -0.28
COMMD4-215ENST00000566843 TMEM210A6NLX4 147 aa13.3□□□□□ -0.28
COMMD4-215ENST00000566843 FAM90A26D6RGX4 464 aa13.3□□□□□ -0.28
COMMD4-215ENST00000566843 TRAPPC2LH3BP13 241 aa13.3□□□□□ -0.28
COMMD4-215ENST00000566843 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.3□□□□□ -0.28
COMMD4-215ENST00000566843 HSPB6O14558 160 aa13.3□□□□□ -0.28
COMMD4-215ENST00000566843 CBR3O75828 277 aa13.3□□□□□ -0.28
COMMD4-215ENST00000566843 RAB4AP20338 218 aa13.3□□□□□ -0.28
COMMD4-215ENST00000566843 CNN1P51911 297 aaKnown RBP13.3□□□□□ -0.28
COMMD4-215ENST00000566843 GNB2P62879 340 aa13.3□□□□□ -0.28
COMMD4-215ENST00000566843 ZNF585BQ52M93 769 aa13.3□□□□□ -0.28
COMMD4-215ENST00000566843 ACSM6Q6P461 480 aa13.3□□□□□ -0.28
COMMD4-215ENST00000566843 CPEB3Q8NE35 698 aaKnown RBP13.3□□□□□ -0.28
COMMD4-215ENST00000566843 ATG101Q9BSB4 218 aa13.3□□□□□ -0.28
COMMD4-215ENST00000566843 TECTAO75443 2155 aa13.3□□□□□ -0.28
COMMD4-215ENST00000566843 UBE2L5PA0A1B0GUS4 154 aa13.29□□□□□ -0.28
COMMD4-215ENST00000566843 G3V3Y1 287 aa13.29□□□□□ -0.28
COMMD4-215ENST00000566843 COX5BP10606 129 aa13.29□□□□□ -0.28
COMMD4-215ENST00000566843 GPM6AP51674 278 aa13.29□□□□□ -0.28
COMMD4-215ENST00000566843 TDGF1P3P51864 188 aa13.29□□□□□ -0.28
COMMD4-215ENST00000566843 CASP6P55212 293 aa13.29□□□□□ -0.28
COMMD4-215ENST00000566843 RPL15P61313 204 aaKnown RBP13.29□□□□□ -0.28
COMMD4-215ENST00000566843 C21orf62-AS1Q17RA5 79 aa13.29□□□□□ -0.28
COMMD4-215ENST00000566843 GGNQ86UU5 652 aa13.29□□□□□ -0.28
COMMD4-215ENST00000566843 ZDHHC23Q8IYP9 409 aa13.29□□□□□ -0.28
COMMD4-215ENST00000566843 R3HDM4Q96D70 268 aa13.29□□□□□ -0.28
COMMD4-215ENST00000566843 IMMP1LQ96LU5 166 aa13.29□□□□□ -0.28
COMMD4-215ENST00000566843 FKBP11Q9NYL4 201 aa13.29□□□□□ -0.28
COMMD4-215ENST00000566843 TNRC6AQ8NDV7 1962 aaKnown RBP13.29□□□□□ -0.28
COMMD4-215ENST00000566843 DEGS1O15121 323 aa13.29□□□□□ -0.28
COMMD4-215ENST00000566843 CARD18P57730 90 aa13.29□□□□□ -0.28
COMMD4-215ENST00000566843 SPANXN5Q5MJ07 72 aa13.29□□□□□ -0.28
COMMD4-215ENST00000566843 KCNE4Q8WWG9 221 aa13.29□□□□□ -0.28
COMMD4-215ENST00000566843 IMMP2LQ96T52 175 aa13.29□□□□□ -0.28
COMMD4-215ENST00000566843 TMEM9BQ9NQ34 198 aa13.29□□□□□ -0.28
COMMD4-215ENST00000566843 POLR3KQ9Y2Y1 108 aaPredicted RBP13.29□□□□□ -0.28
COMMD4-215ENST00000566843 IGHV1-45A0A0A0MS14 117 aa13.28□□□□□ -0.28
COMMD4-215ENST00000566843 MBP02144 154 aa13.28□□□□□ -0.28
COMMD4-215ENST00000566843 SSR4P51571 173 aa13.28□□□□□ -0.28
COMMD4-215ENST00000566843 PRSS8Q16651 343 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms