RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 OR2H1Q9GZK4 316 aa2.56□□□□□ -2
CHD9-216ENST00000565803 SLIRPQ9GZT3 109 aaKnown RBP2.56□□□□□ -2
CHD9-216ENST00000565803 SHARPINQ9H0F6 387 aa2.56□□□□□ -2
CHD9-216ENST00000565803 APOBEC3GQ9HC16 384 aaKnown RBP2.56□□□□□ -2
CHD9-216ENST00000565803 KCNIP2Q9NS61 270 aa2.56□□□□□ -2
CHD9-216ENST00000565803 ACER3Q9NUN7 267 aa2.56□□□□□ -2
CHD9-216ENST00000565803 ZFP30Q9Y2G7 519 aa2.56□□□□□ -2
CHD9-216ENST00000565803 SIGLEC9Q9Y336 463 aa2.56□□□□□ -2
CHD9-216ENST00000565803 SOX21Q9Y651 276 aaPredicted RBP2.56□□□□□ -2
CHD9-216ENST00000565803 SELENOKQ9Y6D0 94 aa2.56□□□□□ -2
CHD9-216ENST00000565803 VPS13AQ96RL7 3174 aa2.56□□□□□ -2
CHD9-216ENST00000565803 TRAV8-2A0A0B4J237 113 aa2.56□□□□□ -2
CHD9-216ENST00000565803 A0A0G2JLM5 398 aa2.56□□□□□ -2
CHD9-216ENST00000565803 NCBP2LA6PVI3 153 aaKnown RBP2.56□□□□□ -2
CHD9-216ENST00000565803 KRBOX1C9JBD0 128 aa2.56□□□□□ -2
CHD9-216ENST00000565803 SEMG1P04279 462 aa2.56□□□□□ -2
CHD9-216ENST00000565803 HLA-DQB2P05538 268 aa2.56□□□□□ -2
CHD9-216ENST00000565803 MMP7P09237 267 aaPredicted RBP2.56□□□□□ -2
CHD9-216ENST00000565803 LIFP15018 202 aa2.56□□□□□ -2
CHD9-216ENST00000565803 OR1E2P47887 323 aa2.56□□□□□ -2
CHD9-216ENST00000565803 GAS1P54826 345 aa2.56□□□□□ -2
CHD9-216ENST00000565803 SLC25A11Q02978 314 aaKnown RBP2.56□□□□□ -2
CHD9-216ENST00000565803 EMX1Q04741 257 aaPredicted RBP2.56□□□□□ -2
CHD9-216ENST00000565803 EIF3IQ13347 325 aaKnown RBP2.56□□□□□ -2
CHD9-216ENST00000565803 HIST3H3Q16695 136 aa2.56□□□□□ -2
CHD9-216ENST00000565803 MS4A13Q5J8X5 152 aa2.56□□□□□ -2
CHD9-216ENST00000565803 OSR2Q8N2R0 312 aa2.56□□□□□ -2
CHD9-216ENST00000565803 OR52L1Q8NGH7 329 aa2.56□□□□□ -2
CHD9-216ENST00000565803 OR4K15Q8NH41 348 aa2.56□□□□□ -2
CHD9-216ENST00000565803 OR5P3Q8WZ94 311 aa2.56□□□□□ -2
CHD9-216ENST00000565803 CMBLQ96DG6 245 aa2.56□□□□□ -2
CHD9-216ENST00000565803 SLC25A44Q96H78 314 aaPredicted RBP2.56□□□□□ -2
CHD9-216ENST00000565803 PSMG3Q9BT73 122 aaPredicted RBP2.56□□□□□ -2
CHD9-216ENST00000565803 FAM49BQ9NUQ9 324 aa2.56□□□□□ -2
CHD9-216ENST00000565803 FAM53CQ9NYF3 392 aa2.56□□□□□ -2
CHD9-216ENST00000565803 V9GYS6 101 aa2.56□□□□□ -2
CHD9-216ENST00000565803 HELZP42694 1942 aaKnown RBP2.56□□□□□ -2
CHD9-216ENST00000565803 TP53BP1Q12888 1972 aaPredicted RBP2.55□□□□□ -2
CHD9-216ENST00000565803 ZNF814B7Z6K7 855 aa2.55□□□□□ -2
CHD9-216ENST00000565803 CORTO00230 105 aa2.55□□□□□ -2
CHD9-216ENST00000565803 SLC17A2O00624 439 aa2.55□□□□□ -2
CHD9-216ENST00000565803 SNAP91O60641 907 aa2.55□□□□□ -2
CHD9-216ENST00000565803 PTHP01270 115 aa2.55□□□□□ -2
CHD9-216ENST00000565803 PRB1P04280 392 aa2.55□□□□□ -2
CHD9-216ENST00000565803 CTSLP07711 333 aa2.55□□□□□ -2
CHD9-216ENST00000565803 CD59P13987 128 aa2.55□□□□□ -2
CHD9-216ENST00000565803 ZNF14P17017 642 aaPredicted RBP2.55□□□□□ -2
CHD9-216ENST00000565803 PSMB1P20618 241 aaKnown RBP2.55□□□□□ -2
CHD9-216ENST00000565803 SHC1P29353 583 aa2.55□□□□□ -2
CHD9-216ENST00000565803 LGALS7P47929 136 aa2.55□□□□□ -2
CHD9-216ENST00000565803 SELENOWP63302 87 aa2.55□□□□□ -2
CHD9-216ENST00000565803 POU3F1Q03052 451 aaPredicted RBP2.55□□□□□ -2
CHD9-216ENST00000565803 ZNF239Q16600 458 aaKnown RBP2.55□□□□□ -2
CHD9-216ENST00000565803 ZNF658BQ4V348 819 aaPredicted RBP2.55□□□□□ -2
CHD9-216ENST00000565803 OLFML2AQ68BL7 652 aa2.55□□□□□ -2
CHD9-216ENST00000565803 ZNF549Q6P9A3 640 aa2.55□□□□□ -2
CHD9-216ENST00000565803 FAM19A5Q7Z5A7 132 aaPredicted RBP2.55□□□□□ -2
CHD9-216ENST00000565803 YTHDF3Q7Z739 585 aaKnown RBP2.55□□□□□ -2
CHD9-216ENST00000565803 OR13A1Q8NGR1 328 aa2.55□□□□□ -2
CHD9-216ENST00000565803 OR5W2Q8NH69 310 aa2.55□□□□□ -2
CHD9-216ENST00000565803 OR1S1Q8NH92 325 aa2.55□□□□□ -2
CHD9-216ENST00000565803 FAM3DQ96BQ1 224 aa2.55□□□□□ -2
CHD9-216ENST00000565803 FMC1Q96HJ9 113 aa2.55□□□□□ -2
CHD9-216ENST00000565803 SIGLEC10Q96LC7 697 aa2.55□□□□□ -2
CHD9-216ENST00000565803 LINC00470Q9BZP3 86 aa2.55□□□□□ -2
CHD9-216ENST00000565803 ARRDC1-AS1Q9H2J1 176 aa2.55□□□□□ -2
CHD9-216ENST00000565803 NIPAL2Q9H841 368 aa2.55□□□□□ -2
CHD9-216ENST00000565803 MRPL16Q9NX20 251 aaKnown RBP2.55□□□□□ -2
CHD9-216ENST00000565803 DENND4CQ5VZ89 1909 aa2.55□□□□□ -2
CHD9-216ENST00000565803 COL1A2P08123 1366 aa2.55□□□□□ -2
CHD9-216ENST00000565803 DYSFO75923 2080 aa2.55□□□□□ -2
CHD9-216ENST00000565803 TRAV36DV7A0A075B6V5 113 aa2.55□□□□□ -2
CHD9-216ENST00000565803 C10orf142B7Z368 130 aa2.55□□□□□ -2
CHD9-216ENST00000565803 MYL12BO14950 172 aa2.55□□□□□ -2
CHD9-216ENST00000565803 DUS4LO95620 317 aaKnown RBP2.55□□□□□ -2
CHD9-216ENST00000565803 PGA5P0DJD9 388 aa2.55□□□□□ -2
CHD9-216ENST00000565803 FGF6P10767 208 aa2.55□□□□□ -2
CHD9-216ENST00000565803 ZNF17P17021 662 aa2.55□□□□□ -2
CHD9-216ENST00000565803 SOX3P41225 446 aa2.55□□□□□ -2
CHD9-216ENST00000565803 UBE2E1P51965 193 aa2.55□□□□□ -2
CHD9-216ENST00000565803 RPS20P60866 119 aaKnown RBP2.55□□□□□ -2
CHD9-216ENST00000565803 NCS1P62166 190 aa2.55□□□□□ -2
CHD9-216ENST00000565803 DEFA5Q01523 94 aa2.55□□□□□ -2
CHD9-216ENST00000565803 MMDQ15546 238 aa2.55□□□□□ -2
CHD9-216ENST00000565803 OR7A5Q15622 319 aa2.55□□□□□ -2
CHD9-216ENST00000565803 C1QL3Q5VWW1 255 aa2.55□□□□□ -2
CHD9-216ENST00000565803 LEG1Q6P5S2 330 aa2.55□□□□□ -2
CHD9-216ENST00000565803 WDR59Q6PJI9 974 aa2.55□□□□□ -2
CHD9-216ENST00000565803 TEX261Q6UWH6 196 aa2.55□□□□□ -2
CHD9-216ENST00000565803 IL34Q6ZMJ4 242 aa2.55□□□□□ -2
CHD9-216ENST00000565803 ZNF705AQ6ZN79 300 aaPredicted RBP2.55□□□□□ -2
CHD9-216ENST00000565803 FAM183BPQ6ZVS7 135 aa2.55□□□□□ -2
CHD9-216ENST00000565803 CEACAM19Q7Z692 300 aa2.55□□□□□ -2
CHD9-216ENST00000565803 ZNF614Q8N883 585 aa2.55□□□□□ -2
CHD9-216ENST00000565803 ZNF709Q8N972 641 aa2.55□□□□□ -2
CHD9-216ENST00000565803 OR8S1Q8NH09 359 aa2.55□□□□□ -2
CHD9-216ENST00000565803 RNF138Q8WVD3 245 aa2.55□□□□□ -2
CHD9-216ENST00000565803 KAZALD1Q96I82 304 aa2.55□□□□□ -2
CHD9-216ENST00000565803 UBE2E2Q96LR5 201 aa2.55□□□□□ -2
CHD9-216ENST00000565803 AGMATQ9BSE5 352 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms