RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 RPS16P62249 146 aaKnown RBP13.9□□□□□ -0.18
LINC00554-201ENST00000564841 MEF2BQ02080 365 aaPredicted RBP13.9□□□□□ -0.18
LINC00554-201ENST00000564841 NMSQ5H8A3 153 aa13.9□□□□□ -0.18
LINC00554-201ENST00000564841 STPG4Q8N801 248 aa13.9□□□□□ -0.18
LINC00554-201ENST00000564841 MRPL30Q8TCC3 161 aaKnown RBP13.9□□□□□ -0.18
LINC00554-201ENST00000564841 ZNF442Q9H7R0 627 aa13.9□□□□□ -0.18
LINC00554-201ENST00000564841 PATZ1Q9HBE1 687 aaKnown RBP13.9□□□□□ -0.18
LINC00554-201ENST00000564841 ST3GAL6Q9Y274 331 aa13.9□□□□□ -0.18
LINC00554-201ENST00000564841 EML6Q6ZMW3 1958 aa13.9□□□□□ -0.18
LINC00554-201ENST00000564841 KBTBD11O94819 623 aa13.9□□□□□ -0.18
LINC00554-201ENST00000564841 IGHG1P01857 330 aa13.9□□□□□ -0.18
LINC00554-201ENST00000564841 MRGPRGQ86SM5 289 aa13.9□□□□□ -0.18
LINC00554-201ENST00000564841 RPP25LQ8N5L8 163 aaKnown RBP13.9□□□□□ -0.18
LINC00554-201ENST00000564841 OR1L6Q8NGR2 347 aa13.9□□□□□ -0.18
LINC00554-201ENST00000564841 RNF150Q9ULK6 438 aa13.9□□□□□ -0.18
LINC00554-201ENST00000564841 GYPAP02724 150 aa13.9□□□□□ -0.18
LINC00554-201ENST00000564841 SCTP09683 121 aa13.9□□□□□ -0.18
LINC00554-201ENST00000564841 IL24Q13007 206 aa13.9□□□□□ -0.18
LINC00554-201ENST00000564841 RNF151Q2KHN1 245 aa13.9□□□□□ -0.18
LINC00554-201ENST00000564841 TPTE2P1Q5T6R2 138 aa13.9□□□□□ -0.18
LINC00554-201ENST00000564841 HAPLN4Q86UW8 402 aa13.9□□□□□ -0.18
LINC00554-201ENST00000564841 TMEM234Q8WY98 164 aa13.9□□□□□ -0.18
LINC00554-201ENST00000564841 LAMA5O15230 3695 aa13.89□□□□□ -0.19
LINC00554-201ENST00000564841 TRAV34A0A0B4J273 112 aa13.89□□□□□ -0.19
LINC00554-201ENST00000564841 NDUFB8O95169 186 aa13.89□□□□□ -0.19
LINC00554-201ENST00000564841 UMODP07911 640 aa13.89□□□□□ -0.19
LINC00554-201ENST00000564841 ACOT6Q3I5F7 207 aaPredicted RBP13.89□□□□□ -0.19
LINC00554-201ENST00000564841 NUFIP2Q7Z417 695 aaKnown RBP13.89□□□□□ -0.19
LINC00554-201ENST00000564841 OR51H1Q8NH63 302 aa13.89□□□□□ -0.19
LINC00554-201ENST00000564841 HSPB9Q9BQS6 159 aa13.89□□□□□ -0.19
LINC00554-201ENST00000564841 DEFB126Q9BYW3 111 aa13.89□□□□□ -0.19
LINC00554-201ENST00000564841 ZFHX2Q9C0A1 2572 aaPredicted RBP13.89□□□□□ -0.19
LINC00554-201ENST00000564841 DMXL1Q9Y485 3027 aa13.89□□□□□ -0.19
LINC00554-201ENST00000564841 A0A1W2PQD3 144 aa13.89□□□□□ -0.19
LINC00554-201ENST00000564841 OR7C1O76099 320 aaPredicted RBP13.89□□□□□ -0.19
LINC00554-201ENST00000564841 PATE4P0C8F1 98 aa13.89□□□□□ -0.19
LINC00554-201ENST00000564841 S100A7P31151 101 aa13.89□□□□□ -0.19
LINC00554-201ENST00000564841 HIST1H3AP68431 136 aa13.89□□□□□ -0.19
LINC00554-201ENST00000564841 TMEM41BQ5BJD5 291 aa13.89□□□□□ -0.19
LINC00554-201ENST00000564841 PHYHD1Q5SRE7 291 aa13.89□□□□□ -0.19
LINC00554-201ENST00000564841 ZDHHC23Q8IYP9 409 aa13.89□□□□□ -0.19
LINC00554-201ENST00000564841 MBD3L1Q8WWY6 194 aa13.89□□□□□ -0.19
LINC00554-201ENST00000564841 TMEM56Q96MV1 263 aa13.89□□□□□ -0.19
LINC00554-201ENST00000564841 TMEM106BQ9NUM4 274 aa13.89□□□□□ -0.19
LINC00554-201ENST00000564841 TP53TG3Q9ULZ0 132 aa13.89□□□□□ -0.19
LINC00554-201ENST00000564841 TMEM56-RWDD3S4R434 201 aa13.89□□□□□ -0.19
LINC00554-201ENST00000564841 TRAF3IP2O43734 574 aaPredicted RBP13.88□□□□□ -0.19
LINC00554-201ENST00000564841 YPEL1O60688 119 aa13.88□□□□□ -0.19
LINC00554-201ENST00000564841 TNFSF13O75888 250 aa13.88□□□□□ -0.19
LINC00554-201ENST00000564841 CRYABP02511 175 aaKnown RBP13.88□□□□□ -0.19
LINC00554-201ENST00000564841 HNF1AP20823 631 aa13.88□□□□□ -0.19
LINC00554-201ENST00000564841 BAXQ07812 192 aa13.88□□□□□ -0.19
LINC00554-201ENST00000564841 SLC25A47Q6Q0C1 308 aa13.88□□□□□ -0.19
LINC00554-201ENST00000564841 YPEL2Q96QA6 119 aa13.88□□□□□ -0.19
LINC00554-201ENST00000564841 SLC39A9Q9NUM3 307 aa13.88□□□□□ -0.19
LINC00554-201ENST00000564841 R4GN57 208 aa13.88□□□□□ -0.19
LINC00554-201ENST00000564841 CFAP47Q6ZTR5 3102 aa13.88□□□□□ -0.19
LINC00554-201ENST00000564841 DTYMKP23919 212 aa13.88□□□□□ -0.19
LINC00554-201ENST00000564841 DDIT4LQ96D03 193 aa13.88□□□□□ -0.19
LINC00554-201ENST00000564841 SPIN2AQ99865 258 aa13.88□□□□□ -0.19
LINC00554-201ENST00000564841 SPIN2BQ9BPZ2 258 aa13.88□□□□□ -0.19
LINC00554-201ENST00000564841 ZNF703Q9H7S9 590 aaPredicted RBP13.88□□□□□ -0.19
LINC00554-201ENST00000564841 CRYAAP02489 173 aa13.88□□□□□ -0.19
LINC00554-201ENST00000564841 TDGF1P13385 188 aa13.88□□□□□ -0.19
LINC00554-201ENST00000564841 ADMP35318 185 aa13.88□□□□□ -0.19
LINC00554-201ENST00000564841 NPBWR2P48146 333 aa13.88□□□□□ -0.19
LINC00554-201ENST00000564841 LINC00310P59036 64 aa13.88□□□□□ -0.19
LINC00554-201ENST00000564841 PMP22Q01453 160 aa13.88□□□□□ -0.19
LINC00554-201ENST00000564841 C17orf67Q0P5P2 114 aa13.88□□□□□ -0.19
LINC00554-201ENST00000564841 ZNF441Q8N8Z8 693 aa13.88□□□□□ -0.19
LINC00554-201ENST00000564841 OR10V1Q8NGI7 309 aa13.88□□□□□ -0.19
LINC00554-201ENST00000564841 GPR146Q96CH1 333 aa13.88□□□□□ -0.19
LINC00554-201ENST00000564841 ZNF837Q96EG3 531 aaPredicted RBP13.88□□□□□ -0.19
LINC00554-201ENST00000564841 MRGPRX4Q96LA9 322 aa13.88□□□□□ -0.19
LINC00554-201ENST00000564841 FAM103A1Q9BTL3 118 aaKnown RBP13.88□□□□□ -0.19
LINC00554-201ENST00000564841 ZFP30Q9Y2G7 519 aa13.88□□□□□ -0.19
LINC00554-201ENST00000564841 FRMD6-AS1P0C7T7 363 aa13.87□□□□□ -0.19
LINC00554-201ENST00000564841 NPPCP23582 126 aa13.87□□□□□ -0.19
LINC00554-201ENST00000564841 RPL15P61313 204 aaKnown RBP13.87□□□□□ -0.19
LINC00554-201ENST00000564841 ERASQ7Z444 233 aa13.87□□□□□ -0.19
LINC00554-201ENST00000564841 AGBL5Q8NDL9 886 aa13.87□□□□□ -0.19
LINC00554-201ENST00000564841 CMTM2Q8TAZ6 248 aa13.87□□□□□ -0.19
LINC00554-201ENST00000564841 EXTL1Q92935 676 aa13.87□□□□□ -0.19
LINC00554-201ENST00000564841 P2RX4Q99571 388 aa13.87□□□□□ -0.19
LINC00554-201ENST00000564841 OR51B6Q9H340 312 aa13.87□□□□□ -0.19
LINC00554-201ENST00000564841 CER1O95813 267 aa13.87□□□□□ -0.19
LINC00554-201ENST00000564841 VDAC1P21796 283 aa13.87□□□□□ -0.19
LINC00554-201ENST00000564841 PTTG1IPP53801 180 aa13.87□□□□□ -0.19
LINC00554-201ENST00000564841 CISD2Q8N5K1 135 aaKnown RBP13.87□□□□□ -0.19
LINC00554-201ENST00000564841 NFAM1Q8NET5 270 aaPredicted RBP13.87□□□□□ -0.19
LINC00554-201ENST00000564841 OR4C12Q96R67 309 aa13.87□□□□□ -0.19
LINC00554-201ENST00000564841 DERL1Q9BUN8 251 aa13.87□□□□□ -0.19
LINC00554-201ENST00000564841 TUBG2Q9NRH3 451 aa13.87□□□□□ -0.19
LINC00554-201ENST00000564841 UBE2L5PA0A1B0GUS4 154 aa13.86□□□□□ -0.19
LINC00554-201ENST00000564841 ANKUB1A6NFN9 424 aa13.86□□□□□ -0.19
LINC00554-201ENST00000564841 C1QTNF9P0C862 333 aa13.86□□□□□ -0.19
LINC00554-201ENST00000564841 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.86□□□□□ -0.19
LINC00554-201ENST00000564841 ZNF525Q8N782 197 aa13.86□□□□□ -0.19
LINC00554-201ENST00000564841 ZNF709Q8N972 641 aa13.86□□□□□ -0.19
LINC00554-201ENST00000564841 CIB3Q96Q77 187 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms