RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 SESN1Q9Y6P5 492 aa13.89□□□□□ -0.19
CMTM3-208ENST00000564247 IGHV3-43A0A0B4J1X8 118 aa13.88□□□□□ -0.19
CMTM3-208ENST00000564247 FAM172BPA6NC97 362 aa13.88□□□□□ -0.19
CMTM3-208ENST00000564247 YPEL1O60688 119 aa13.88□□□□□ -0.19
CMTM3-208ENST00000564247 IGHV3-43DP0DP04 118 aa13.88□□□□□ -0.19
CMTM3-208ENST00000564247 SRD5A1P18405 259 aa13.88□□□□□ -0.19
CMTM3-208ENST00000564247 HERV-K104P61576 105 aa13.88□□□□□ -0.19
CMTM3-208ENST00000564247 DCAF12L2Q5VW00 463 aa13.88□□□□□ -0.19
CMTM3-208ENST00000564247 FAAP20Q6NZ36 180 aa13.88□□□□□ -0.19
CMTM3-208ENST00000564247 IL17RELQ6ZVW7 336 aa13.88□□□□□ -0.19
CMTM3-208ENST00000564247 OR10V1Q8NGI7 309 aa13.88□□□□□ -0.19
CMTM3-208ENST00000564247 OR51S1Q8NGJ8 323 aa13.88□□□□□ -0.19
CMTM3-208ENST00000564247 EDARADDQ8WWZ3 215 aa13.88□□□□□ -0.19
CMTM3-208ENST00000564247 DACT3Q96B18 629 aaPredicted RBP13.88□□□□□ -0.19
CMTM3-208ENST00000564247 TMEM186Q96B77 213 aa13.88□□□□□ -0.19
CMTM3-208ENST00000564247 YPEL2Q96QA6 119 aa13.88□□□□□ -0.19
CMTM3-208ENST00000564247 ZNF2Q9BSG1 426 aaPredicted RBP13.88□□□□□ -0.19
CMTM3-208ENST00000564247 C11orf54Q9H0W9 315 aaPredicted RBP13.88□□□□□ -0.19
CMTM3-208ENST00000564247 METTL8Q9H825 291 aaKnown RBP13.88□□□□□ -0.19
CMTM3-208ENST00000564247 HEXA-AS1Q9H8Q6 139 aa13.88□□□□□ -0.19
CMTM3-208ENST00000564247 RDH8Q9NYR8 311 aa13.88□□□□□ -0.19
CMTM3-208ENST00000564247 OR1A1Q9P1Q5 309 aa13.88□□□□□ -0.19
CMTM3-208ENST00000564247 TBC1D24Q9ULP9 559 aa13.88□□□□□ -0.19
CMTM3-208ENST00000564247 RBM7Q9Y580 266 aaKnown RBP13.88□□□□□ -0.19
CMTM3-208ENST00000564247 FAM240BA0A1B0GVZ2 78 aa13.87□□□□□ -0.19
CMTM3-208ENST00000564247 TOX4O94842 621 aa13.87□□□□□ -0.19
CMTM3-208ENST00000564247 ZNF735P0CB33 412 aa13.87□□□□□ -0.19
CMTM3-208ENST00000564247 NFYAP23511 347 aaPredicted RBP13.87□□□□□ -0.19
CMTM3-208ENST00000564247 PRTN3P24158 256 aa13.87□□□□□ -0.19
CMTM3-208ENST00000564247 PPP1CCP36873 323 aaKnown RBP13.87□□□□□ -0.19
CMTM3-208ENST00000564247 LOXL3P58215 753 aa13.87□□□□□ -0.19
CMTM3-208ENST00000564247 MORN2Q502X0 79 aa13.87□□□□□ -0.19
CMTM3-208ENST00000564247 LY6G6FQ5SQ64 297 aa13.87□□□□□ -0.19
CMTM3-208ENST00000564247 H1FOOQ8IZA3 346 aaPredicted RBP13.87□□□□□ -0.19
CMTM3-208ENST00000564247 C11orf42Q8N5U0 333 aa13.87□□□□□ -0.19
CMTM3-208ENST00000564247 OR13D1Q8NGV5 346 aa13.87□□□□□ -0.19
CMTM3-208ENST00000564247 TERB2Q8NHR7 220 aa13.87□□□□□ -0.19
CMTM3-208ENST00000564247 SUCNR1Q9BXA5 334 aa13.87□□□□□ -0.19
CMTM3-208ENST00000564247 TMPRSS13Q9BYE2 586 aa13.87□□□□□ -0.19
CMTM3-208ENST00000564247 TOLLIPQ9H0E2 274 aa13.87□□□□□ -0.19
CMTM3-208ENST00000564247 TMEM133Q9H2Q1 129 aa13.87□□□□□ -0.19
CMTM3-208ENST00000564247 HIF1ANQ9NWT6 349 aa13.87□□□□□ -0.19
CMTM3-208ENST00000564247 OR2W1Q9Y3N9 320 aa13.87□□□□□ -0.19
CMTM3-208ENST00000564247 DNHD1Q96M86 4753 aa13.87□□□□□ -0.19
CMTM3-208ENST00000564247 COL6A5A8TX70 2615 aa13.86□□□□□ -0.19
CMTM3-208ENST00000564247 TOR1AO14656 332 aa13.86□□□□□ -0.19
CMTM3-208ENST00000564247 MMP23AO75900 390 aa13.86□□□□□ -0.19
CMTM3-208ENST00000564247 LUMP51884 338 aaPredicted RBP13.86□□□□□ -0.19
CMTM3-208ENST00000564247 PAX8Q06710 450 aa13.86□□□□□ -0.19
CMTM3-208ENST00000564247 Q3ZCU0 254 aa13.86□□□□□ -0.19
CMTM3-208ENST00000564247 IDO2Q6ZQW0 420 aa13.86□□□□□ -0.19
CMTM3-208ENST00000564247 Q8N7P7 452 aa13.86□□□□□ -0.19
CMTM3-208ENST00000564247 OR2AK2Q8NG84 335 aa13.86□□□□□ -0.19
CMTM3-208ENST00000564247 ENKURQ8TC29 256 aa13.86□□□□□ -0.19
CMTM3-208ENST00000564247 SCGB3A2Q96PL1 93 aa13.86□□□□□ -0.19
CMTM3-208ENST00000564247 PCGF1Q9BSM1 259 aa13.86□□□□□ -0.19
CMTM3-208ENST00000564247 DPAGT1Q9H3H5 408 aa13.86□□□□□ -0.19
CMTM3-208ENST00000564247 SLC2A8Q9NY64 477 aa13.86□□□□□ -0.19
CMTM3-208ENST00000564247 TUSC2O75896 110 aa13.85□□□□□ -0.19
CMTM3-208ENST00000564247 PPYP01298 95 aa13.85□□□□□ -0.19
CMTM3-208ENST00000564247 AADACP22760 399 aa13.85□□□□□ -0.19
CMTM3-208ENST00000564247 ECI1P42126 302 aa13.85□□□□□ -0.19
CMTM3-208ENST00000564247 PRRX1P54821 245 aa13.85□□□□□ -0.19
CMTM3-208ENST00000564247 GNMTQ14749 295 aa13.85□□□□□ -0.19
CMTM3-208ENST00000564247 RGS21Q2M5E4 152 aa13.85□□□□□ -0.19
CMTM3-208ENST00000564247 ZNF660Q6AZW8 331 aaPredicted RBP13.85□□□□□ -0.19
CMTM3-208ENST00000564247 LPCAT3Q6P1A2 487 aa13.85□□□□□ -0.19
CMTM3-208ENST00000564247 FAHD2BQ6P2I3 314 aaPredicted RBP13.85□□□□□ -0.19
CMTM3-208ENST00000564247 VMO1Q7Z5L0 202 aa13.85□□□□□ -0.19
CMTM3-208ENST00000564247 ABHD12Q8N2K0 398 aa13.85□□□□□ -0.19
CMTM3-208ENST00000564247 OR9G1Q8NH87 305 aa13.85□□□□□ -0.19
CMTM3-208ENST00000564247 FAM216AQ8WUB2 273 aa13.85□□□□□ -0.19
CMTM3-208ENST00000564247 FAHD2AQ96GK7 314 aa13.85□□□□□ -0.19
CMTM3-208ENST00000564247 MDFIQ99750 246 aa13.85□□□□□ -0.19
CMTM3-208ENST00000564247 SLC25A21Q9BQT8 299 aaPredicted RBP13.85□□□□□ -0.19
CMTM3-208ENST00000564247 SIRPDQ9H106 197 aa13.85□□□□□ -0.19
CMTM3-208ENST00000564247 UNKLQ9H9P5 680 aaKnown RBP13.85□□□□□ -0.19
CMTM3-208ENST00000564247 SIRT7Q9NRC8 400 aa13.85□□□□□ -0.19
CMTM3-208ENST00000564247 COPZ2Q9P299 210 aa13.85□□□□□ -0.19
CMTM3-208ENST00000564247 AUP1Q9Y679 476 aa13.85□□□□□ -0.19
CMTM3-208ENST00000564247 A0A087X0M5 115 aa13.84□□□□□ -0.19
CMTM3-208ENST00000564247 A0A1B0GX30 115 aa13.84□□□□□ -0.19
CMTM3-208ENST00000564247 J3QLI3 93 aa13.84□□□□□ -0.19
CMTM3-208ENST00000564247 ITGB1BP1O14713 200 aa13.84□□□□□ -0.19
CMTM3-208ENST00000564247 RAB7AP51149 207 aa13.84□□□□□ -0.19
CMTM3-208ENST00000564247 FXYD4P59646 89 aa13.84□□□□□ -0.19
CMTM3-208ENST00000564247 NCR3LG1Q68D85 454 aa13.84□□□□□ -0.19
CMTM3-208ENST00000564247 C8orf31Q8N9H6 132 aa13.84□□□□□ -0.19
CMTM3-208ENST00000564247 LEAP2Q969E1 77 aa13.84□□□□□ -0.19
CMTM3-208ENST00000564247 MOB3AQ96BX8 217 aa13.84□□□□□ -0.19
CMTM3-208ENST00000564247 CLEC7AQ9BXN2 247 aa13.84□□□□□ -0.19
CMTM3-208ENST00000564247 GHITMQ9H3K2 345 aa13.84□□□□□ -0.19
CMTM3-208ENST00000564247 C7orf69Q9H7B7 122 aa13.84□□□□□ -0.19
CMTM3-208ENST00000564247 PSG11Q9UQ72 335 aa13.84□□□□□ -0.19
CMTM3-208ENST00000564247 SLC22A5O76082 557 aa13.83□□□□□ -0.2
CMTM3-208ENST00000564247 IGHV3-7P01780 117 aa13.83□□□□□ -0.2
CMTM3-208ENST00000564247 OR8U9P0C7N5 309 aa13.83□□□□□ -0.2
CMTM3-208ENST00000564247 PGAM2P15259 253 aa13.83□□□□□ -0.2
CMTM3-208ENST00000564247 CD34P28906 385 aa13.83□□□□□ -0.2
CMTM3-208ENST00000564247 SLC6A1P30531 599 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms