RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 TNFSF8P32971 234 aa7.88□□□□□ -1.15
CLK3-208ENST00000562626 TALDO1P37837 337 aa7.88□□□□□ -1.15
CLK3-208ENST00000562626 OR3A3P47888 321 aa7.88□□□□□ -1.15
CLK3-208ENST00000562626 REG1BP48304 166 aa7.88□□□□□ -1.15
CLK3-208ENST00000562626 LGALS4P56470 323 aa7.88□□□□□ -1.15
CLK3-208ENST00000562626 UBA52P62987 128 aaKnown RBP7.88□□□□□ -1.15
CLK3-208ENST00000562626 BAMBIQ13145 260 aa7.88□□□□□ -1.15
CLK3-208ENST00000562626 LY6EQ16553 131 aa7.88□□□□□ -1.15
CLK3-208ENST00000562626 KRTAP24-1Q3LI83 254 aa7.88□□□□□ -1.15
CLK3-208ENST00000562626 MINOS1Q5TGZ0 78 aa7.88□□□□□ -1.15
CLK3-208ENST00000562626 CCBE1Q6UXH8 406 aaPredicted RBP7.88□□□□□ -1.15
CLK3-208ENST00000562626 HOGA1Q86XE5 327 aa7.88□□□□□ -1.15
CLK3-208ENST00000562626 OR4A4PQ8NGN8 299 aa7.88□□□□□ -1.15
CLK3-208ENST00000562626 GPX8Q8TED1 209 aa7.88□□□□□ -1.15
CLK3-208ENST00000562626 CFHR4Q92496 578 aa7.88□□□□□ -1.15
CLK3-208ENST00000562626 ZDHHC16Q969W1 377 aa7.88□□□□□ -1.15
CLK3-208ENST00000562626 PHF21AQ96BD5 680 aa7.88□□□□□ -1.15
CLK3-208ENST00000562626 DGCR14Q96DF8 476 aaKnown RBP7.88□□□□□ -1.15
CLK3-208ENST00000562626 ABHD14BQ96IU4 210 aa7.88□□□□□ -1.15
CLK3-208ENST00000562626 YPEL2Q96QA6 119 aa7.88□□□□□ -1.15
CLK3-208ENST00000562626 SSX3Q99909 188 aa7.88□□□□□ -1.15
CLK3-208ENST00000562626 OCSTAMPQ9BR26 566 aa7.88□□□□□ -1.15
CLK3-208ENST00000562626 AGMATQ9BSE5 352 aa7.88□□□□□ -1.15
CLK3-208ENST00000562626 CHIAQ9BZP6 476 aa7.88□□□□□ -1.15
CLK3-208ENST00000562626 IFI27L2Q9H2X8 130 aa7.88□□□□□ -1.15
CLK3-208ENST00000562626 RDH8Q9NYR8 311 aa7.88□□□□□ -1.15
CLK3-208ENST00000562626 DPM3Q9P2X0 92 aa7.88□□□□□ -1.15
CLK3-208ENST00000562626 FAM96BQ9Y3D0 163 aa7.88□□□□□ -1.15
CLK3-208ENST00000562626 MINOS1-NBL1R4GNA1 71 aa7.88□□□□□ -1.15
CLK3-208ENST00000562626 POM121CA8CG34 1229 aa7.87□□□□□ -1.15
CLK3-208ENST00000562626 ZNF736B4DX44 427 aaPredicted RBP7.87□□□□□ -1.15
CLK3-208ENST00000562626 CHST1O43916 411 aa7.87□□□□□ -1.15
CLK3-208ENST00000562626 CEACAM6P40199 344 aa7.87□□□□□ -1.15
CLK3-208ENST00000562626 MNDAP41218 407 aa7.87□□□□□ -1.15
CLK3-208ENST00000562626 PRRX1P54821 245 aa7.87□□□□□ -1.15
CLK3-208ENST00000562626 LINC00205P59089 165 aa7.87□□□□□ -1.15
CLK3-208ENST00000562626 MRPS15P82914 257 aaKnown RBP7.87□□□□□ -1.15
CLK3-208ENST00000562626 DGCR2P98153 550 aa7.87□□□□□ -1.15
CLK3-208ENST00000562626 ARL6IP1Q15041 203 aa7.87□□□□□ -1.15
CLK3-208ENST00000562626 SRSF7Q16629 238 aaKnown RBP eCLIP7.87□□□□□ -1.15
CLK3-208ENST00000562626 LRRC75BQ2VPJ9 315 aa7.87□□□□□ -1.15
CLK3-208ENST00000562626 RPL39P5Q59GN2 51 aa7.87□□□□□ -1.15
CLK3-208ENST00000562626 LY6G6FQ5SQ64 297 aa7.87□□□□□ -1.15
CLK3-208ENST00000562626 LYSMD2Q8IV50 215 aa7.87□□□□□ -1.15
CLK3-208ENST00000562626 H1FOOQ8IZA3 346 aaPredicted RBP7.87□□□□□ -1.15
CLK3-208ENST00000562626 LYG1Q8N1E2 194 aa7.87□□□□□ -1.15
CLK3-208ENST00000562626 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.87□□□□□ -1.15
CLK3-208ENST00000562626 C8orf31Q8N9H6 132 aa7.87□□□□□ -1.15
CLK3-208ENST00000562626 BEST4Q8NFU0 473 aa7.87□□□□□ -1.15
CLK3-208ENST00000562626 OR52I2Q8NH67 350 aa7.87□□□□□ -1.15
CLK3-208ENST00000562626 ZNF418Q8TF45 676 aaPredicted RBP7.87□□□□□ -1.15
CLK3-208ENST00000562626 CREB3L1Q96BA8 519 aa7.87□□□□□ -1.15
CLK3-208ENST00000562626 MALSU1Q96EH3 234 aa7.87□□□□□ -1.15
CLK3-208ENST00000562626 SOSTQ9BQB4 213 aa7.87□□□□□ -1.15
CLK3-208ENST00000562626 ZNF251Q9BRH9 671 aa7.87□□□□□ -1.15
CLK3-208ENST00000562626 ABHD14AQ9BUJ0 271 aa7.87□□□□□ -1.15
CLK3-208ENST00000562626 TOLLIPQ9H0E2 274 aa7.87□□□□□ -1.15
CLK3-208ENST00000562626 ANXA10Q9UJ72 324 aa7.87□□□□□ -1.15
CLK3-208ENST00000562626 RNF150Q9ULK6 438 aa7.87□□□□□ -1.15
CLK3-208ENST00000562626 STAB1Q9NY15 2570 aa7.87□□□□□ -1.15
CLK3-208ENST00000562626 TENM1Q9UKZ4 2725 aa7.86□□□□□ -1.15
CLK3-208ENST00000562626 SAA2-SAA4A0A096LPE2 208 aa7.86□□□□□ -1.15
CLK3-208ENST00000562626 IGHV3-72A0A0B4J1Y9 119 aa7.86□□□□□ -1.15
CLK3-208ENST00000562626 IGKV1D-13A0A0B4J2D9 117 aa7.86□□□□□ -1.15
CLK3-208ENST00000562626 VGLL3A8MV65 326 aa7.86□□□□□ -1.15
CLK3-208ENST00000562626 LEUTXA8MZ59 168 aa7.86□□□□□ -1.15
CLK3-208ENST00000562626 HSD17B6O14756 317 aa7.86□□□□□ -1.15
CLK3-208ENST00000562626 TIMM23O14925 209 aa7.86□□□□□ -1.15
CLK3-208ENST00000562626 LANCL1O43813 399 aa7.86□□□□□ -1.15
CLK3-208ENST00000562626 SAA2P0DJI9 122 aaPredicted RBP7.86□□□□□ -1.15
CLK3-208ENST00000562626 IGKV1-13P0DP09 117 aa7.86□□□□□ -1.15
CLK3-208ENST00000562626 NAT1P18440 290 aa7.86□□□□□ -1.15
CLK3-208ENST00000562626 NFYAP23511 347 aaPredicted RBP7.86□□□□□ -1.15
CLK3-208ENST00000562626 PRSS3P35030 304 aa7.86□□□□□ -1.15
CLK3-208ENST00000562626 KIR2DS4P43632 304 aa7.86□□□□□ -1.15
CLK3-208ENST00000562626 ZNF137PP52743 207 aa7.86□□□□□ -1.15
CLK3-208ENST00000562626 PITPNAQ00169 270 aa7.86□□□□□ -1.15
CLK3-208ENST00000562626 KIR2DS1Q14954 304 aa7.86□□□□□ -1.15
CLK3-208ENST00000562626 ZNF79Q15937 498 aa7.86□□□□□ -1.15
CLK3-208ENST00000562626 CNPY1Q3B7I2 92 aa7.86□□□□□ -1.15
CLK3-208ENST00000562626 TMEM30BQ3MIR4 351 aa7.86□□□□□ -1.15
CLK3-208ENST00000562626 Q3ZCU0 254 aa7.86□□□□□ -1.15
CLK3-208ENST00000562626 STEAP3Q658P3 488 aa7.86□□□□□ -1.15
CLK3-208ENST00000562626 TMEM219Q86XT9 240 aa7.86□□□□□ -1.15
CLK3-208ENST00000562626 DRAM1Q8N682 238 aa7.86□□□□□ -1.15
CLK3-208ENST00000562626 OR10X1Q8NGY0 326 aa7.86□□□□□ -1.15
CLK3-208ENST00000562626 TOMM40LQ969M1 308 aa7.86□□□□□ -1.15
CLK3-208ENST00000562626 DIRAS2Q96HU8 199 aa7.86□□□□□ -1.15
CLK3-208ENST00000562626 NDUFA13Q9P0J0 144 aa7.86□□□□□ -1.15
CLK3-208ENST00000562626 ADAM30Q9UKF2 790 aa7.86□□□□□ -1.15
CLK3-208ENST00000562626 MGAT4AQ9UM21 535 aa7.86□□□□□ -1.15
CLK3-208ENST00000562626 V9GYH0 126 aa7.86□□□□□ -1.15
CLK3-208ENST00000562626 TNCP24821 2201 aa7.85□□□□□ -1.15
CLK3-208ENST00000562626 IGHV1-3A0A0C4DH29 117 aa7.85□□□□□ -1.15
CLK3-208ENST00000562626 J3QRK9 145 aa7.85□□□□□ -1.15
CLK3-208ENST00000562626 HSPA12AO43301 675 aa7.85□□□□□ -1.15
CLK3-208ENST00000562626 LPLP06858 475 aa7.85□□□□□ -1.15
CLK3-208ENST00000562626 RNASE1P07998 156 aaKnown RBP7.85□□□□□ -1.15
CLK3-208ENST00000562626 ZBTB25P24278 435 aa7.85□□□□□ -1.15
CLK3-208ENST00000562626 RELBQ01201 579 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms