RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, human

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB1-223	ENST00000561304	RPS25	P62851	125 aa	Known RBP	5.82	□□□□□ -1.48
ZEB1-223	ENST00000561304	QRFP	P83859	136 aa		5.82	□□□□□ -1.48
ZEB1-223	ENST00000561304	GPR50	Q13585	617 aa		5.82	□□□□□ -1.48
ZEB1-223	ENST00000561304	MED22	Q15528	200 aa		5.82	□□□□□ -1.48
ZEB1-223	ENST00000561304	LIPK	Q5VXJ0	399 aa		5.82	□□□□□ -1.48
ZEB1-223	ENST00000561304	RNLS	Q5VYX0	342 aa		5.82	□□□□□ -1.48
ZEB1-223	ENST00000561304	TMEM91	Q6ZNR0	172 aa		5.82	□□□□□ -1.48
ZEB1-223	ENST00000561304	LCNL1	Q6ZST4	164 aa		5.82	□□□□□ -1.48
ZEB1-223	ENST00000561304	SLC35E3	Q7Z769	313 aa		5.82	□□□□□ -1.48
ZEB1-223	ENST00000561304	STPG2	Q8N412	459 aa		5.82	□□□□□ -1.48
ZEB1-223	ENST00000561304	LINC00482	Q8N8I6	264 aa		5.82	□□□□□ -1.48
ZEB1-223	ENST00000561304	OR52L2P	Q8NGH6	319 aa		5.82	□□□□□ -1.48
ZEB1-223	ENST00000561304	MRPS24	Q96EL2	167 aa	Known RBP	5.82	□□□□□ -1.48
ZEB1-223	ENST00000561304	DUX3	Q96PT4	197 aa		5.82	□□□□□ -1.48
ZEB1-223	ENST00000561304	HSPB9	Q9BQS6	159 aa		5.82	□□□□□ -1.48
ZEB1-223	ENST00000561304	UQCC2	Q9BRT2	126 aa		5.82	□□□□□ -1.48
ZEB1-223	ENST00000561304	DCLRE1B	Q9H816	532 aa		5.82	□□□□□ -1.48
ZEB1-223	ENST00000561304	TAF9B	Q9HBM6	251 aa		5.82	□□□□□ -1.48
ZEB1-223	ENST00000561304	SPACA1	Q9HBV2	294 aa		5.82	□□□□□ -1.48
ZEB1-223	ENST00000561304	NECAP2	Q9NVZ3	263 aa		5.82	□□□□□ -1.48
ZEB1-223	ENST00000561304	GNG12	Q9UBI6	72 aa		5.82	□□□□□ -1.48
ZEB1-223	ENST00000561304	PFDN2	Q9UHV9	154 aa		5.82	□□□□□ -1.48
ZEB1-223	ENST00000561304	ERGIC3	Q9Y282	383 aa		5.82	□□□□□ -1.48
ZEB1-223	ENST00000561304	SERPINE3	A8MV23	424 aa		5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304		H0YHG0	523 aa		5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304		H3BUI4	141 aa		5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304		K7EIL1	84 aa		5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304	SHOX	O15266	292 aa		5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304	SPINT2	O43291	252 aa		5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304	UCHL1	P09936	223 aa		5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304	CD37	P11049	281 aa		5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304	FUT3	P21217	361 aa		5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304	MYF6	P23409	242 aa		5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304	CNTFR	P26992	372 aa		5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304	MAPK3	P27361	379 aa	Predicted RBP	5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304	HTR2C	P28335	458 aa		5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304	CD1B	P29016	333 aa		5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304	GPR12	P47775	334 aa		5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304	RPS27A	P62979	156 aa	Known RBP	5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304	PLA2G7	Q13093	441 aa		5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304	LSAMP	Q13449	338 aa		5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304	P2RY14	Q15391	338 aa		5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304	SPHAR	Q15513	63 aa		5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304	HMGN3	Q15651	99 aa		5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304	DEFB136	Q30KP8	78 aa		5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304		Q3ZCU0	254 aa		5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304	MORN2	Q502X0	79 aa		5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304	C1orf100	Q5SVJ3	147 aa		5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304	C6orf183	Q5T699	404 aa		5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304	OR2W3	Q7Z3T1	314 aa		5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304	C6orf201	Q7Z4U5	140 aa		5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304	CEACAM19	Q7Z692	300 aa		5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304	TGIF2LX	Q8IUE1	241 aa		5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304	FAM71E2	Q8N5Q1	922 aa		5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304	MRAP	Q8TCY5	172 aa		5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304	TMEM203	Q969S6	136 aa		5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304	RITA1	Q96K30	269 aa		5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304	S1PR3	Q99500	378 aa		5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304	HDHD3	Q9BSH5	251 aa	Predicted RBP	5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304	FAAP24	Q9BTP7	215 aa		5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304	ABHD14A	Q9BUJ0	271 aa		5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304	TMEM59	Q9BXS4	323 aa		5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304	MRPL20	Q9BYC9	149 aa	Known RBP	5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304	PARP12	Q9H0J9	701 aa	Known RBP	5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304	ABCG5	Q9H222	651 aa		5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304	VCX	Q9H320	206 aa		5.81	□□□□□ -1.48
ZEB1-223	ENST00000561304	SAA2-SAA4	A0A096LPE2	208 aa		5.8	□□□□□ -1.48
ZEB1-223	ENST00000561304	NCBP2L	A6PVI3	153 aa	Known RBP	5.8	□□□□□ -1.48
ZEB1-223	ENST00000561304	TMEM14DP	A8MWL7	114 aa		5.8	□□□□□ -1.48
ZEB1-223	ENST00000561304	SLC22A1	O15245	554 aa		5.8	□□□□□ -1.48
ZEB1-223	ENST00000561304	CA11	O75493	328 aa		5.8	□□□□□ -1.48
ZEB1-223	ENST00000561304	MOS	P00540	346 aa		5.8	□□□□□ -1.48
ZEB1-223	ENST00000561304	SAA2	P0DJI9	122 aa	Predicted RBP	5.8	□□□□□ -1.48
ZEB1-223	ENST00000561304	SLC2A2	P11168	524 aa	Predicted RBP	5.8	□□□□□ -1.48
ZEB1-223	ENST00000561304	IL3RA	P26951	378 aa		5.8	□□□□□ -1.48
ZEB1-223	ENST00000561304	HOXD3	P31249	432 aa	Predicted RBP	5.8	□□□□□ -1.48
ZEB1-223	ENST00000561304	MAP2K4	P45985	399 aa		5.8	□□□□□ -1.48
ZEB1-223	ENST00000561304	OR3A3	P47888	321 aa		5.8	□□□□□ -1.48
ZEB1-223	ENST00000561304	THBS3	P49746	956 aa		5.8	□□□□□ -1.48
ZEB1-223	ENST00000561304	CFHR3	Q02985	330 aa		5.8	□□□□□ -1.48
ZEB1-223	ENST00000561304	C4orf46	Q504U0	113 aa		5.8	□□□□□ -1.48
ZEB1-223	ENST00000561304	HSD17B12	Q53GQ0	312 aa		5.8	□□□□□ -1.48
ZEB1-223	ENST00000561304	MS4A15	Q8N5U1	240 aa		5.8	□□□□□ -1.48
ZEB1-223	ENST00000561304	KLHL30-AS1	Q8NEE0	82 aa		5.8	□□□□□ -1.48
ZEB1-223	ENST00000561304	OR2T10	Q8NGZ9	312 aa		5.8	□□□□□ -1.48
ZEB1-223	ENST00000561304	CHPT1	Q8WUD6	406 aa		5.8	□□□□□ -1.48
ZEB1-223	ENST00000561304	PHYHIP	Q92561	330 aa		5.8	□□□□□ -1.48
ZEB1-223	ENST00000561304	TM2D1	Q9BX74	207 aa		5.8	□□□□□ -1.48
ZEB1-223	ENST00000561304	ANKRD60	Q9BZ19	345 aa		5.8	□□□□□ -1.48
ZEB1-223	ENST00000561304	CST11	Q9H112	138 aa		5.8	□□□□□ -1.48
ZEB1-223	ENST00000561304	IFI27L2	Q9H2X8	130 aa		5.8	□□□□□ -1.48
ZEB1-223	ENST00000561304	DUSP21	Q9H596	190 aa		5.8	□□□□□ -1.48
ZEB1-223	ENST00000561304	OR2S2	Q9NQN1	319 aa		5.8	□□□□□ -1.48
ZEB1-223	ENST00000561304	LIN7C	Q9NUP9	197 aa	Known RBP	5.8	□□□□□ -1.48
ZEB1-223	ENST00000561304	WI2-2373I1.2	A0A1W2PRP0	233 aa		5.8	□□□□□ -1.48
ZEB1-223	ENST00000561304	FOXI3	A8MTJ6	420 aa	Predicted RBP	5.8	□□□□□ -1.48
ZEB1-223	ENST00000561304	SOCS1	O15524	211 aa		5.8	□□□□□ -1.48
ZEB1-223	ENST00000561304	TXNL1	O43396	289 aa		5.8	□□□□□ -1.48
ZEB1-223	ENST00000561304	LANCL1	O43813	399 aa		5.8	□□□□□ -1.48
ZEB1-223	ENST00000561304	NAPSA	O96009	420 aa		5.8	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms