RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 CLEC12BQ2HXU8 276 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 Q3ZCU0 254 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 C4orf46Q504U0 113 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 TMEM128Q5BJH2 165 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 LY6G6FQ5SQ64 297 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 AADACL3Q5VUY0 350 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 TMEM200BQ69YZ2 307 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 ZNF660Q6AZW8 331 aaPredicted RBP5.31□□□□□ -1.56
SPG11-221ENST00000560299 HEPN1Q6WQI6 88 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 ZNF841Q6ZN19 808 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 Q6ZPA2 131 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 TMED4Q7Z7H5 227 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 ZBTB34Q8NCN2 500 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 OR2AK2Q8NG84 335 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 OR10V1Q8NGI7 309 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 OR13C8Q8NGS7 320 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 C10orf105Q8TEF2 133 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 SECTM1Q8WVN6 248 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 TOMM40LQ969M1 308 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 UPRTQ96BW1 309 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 CYYR1Q96J86 154 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 AKR1E2Q96JD6 320 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 YPEL2Q96QA6 119 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 TMPRSS13Q9BYE2 586 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 SLC5A7Q9GZV3 580 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 TOLLIPQ9H0E2 274 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 NARFLQ9H6Q4 476 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 LINC00574Q9H8X3 128 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 C19orf12Q9NSK7 152 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 RDH8Q9NYR8 311 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 RPUSD1Q9UJJ7 312 aaKnown RBP5.31□□□□□ -1.56
SPG11-221ENST00000560299 ZNF221Q9UK13 617 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 GPR132Q9UNW8 380 aa5.31□□□□□ -1.56
SPG11-221ENST00000560299 hCG_2014768A0A024R1R8 64 aa5.3□□□□□ -1.56
SPG11-221ENST00000560299 IGKV1-6A0A0C4DH72 117 aa5.3□□□□□ -1.56
SPG11-221ENST00000560299 TEX13DA0A0J9YY54 714 aaPredicted RBP5.3□□□□□ -1.56
SPG11-221ENST00000560299 RNF212BA8MTL3 300 aa5.3□□□□□ -1.56
SPG11-221ENST00000560299 SNRPGP15A8MWD9 76 aa5.3□□□□□ -1.56
SPG11-221ENST00000560299 M0R1W7 72 aa5.3□□□□□ -1.56
SPG11-221ENST00000560299 GPR31O00270 319 aa5.3□□□□□ -1.56
SPG11-221ENST00000560299 ITGB1BP1O14713 200 aa5.3□□□□□ -1.56
SPG11-221ENST00000560299 ENSAO43768 121 aaKnown RBP5.3□□□□□ -1.56
SPG11-221ENST00000560299 CREBL2O60519 120 aaPredicted RBP5.3□□□□□ -1.56
SPG11-221ENST00000560299 B3GALNT1O75752 331 aa5.3□□□□□ -1.56
SPG11-221ENST00000560299 OR4E1P0C645 316 aa5.3□□□□□ -1.56
SPG11-221ENST00000560299 AKR1C4P17516 323 aa5.3□□□□□ -1.56
SPG11-221ENST00000560299 USF1P22415 310 aaPredicted RBP5.3□□□□□ -1.56
SPG11-221ENST00000560299 PRRX1P54821 245 aa5.3□□□□□ -1.56
SPG11-221ENST00000560299 ERVFRD-1P60508 538 aa5.3□□□□□ -1.56
SPG11-221ENST00000560299 LOXL1Q08397 574 aaPredicted RBP5.3□□□□□ -1.56
SPG11-221ENST00000560299 ZNF273Q14593 569 aa5.3□□□□□ -1.56
SPG11-221ENST00000560299 MSMO1Q15800 293 aa5.3□□□□□ -1.56
SPG11-221ENST00000560299 LTC4SQ16873 150 aa5.3□□□□□ -1.56
SPG11-221ENST00000560299 C17orf58Q2M2W7 97 aa5.3□□□□□ -1.56
SPG11-221ENST00000560299 MORN2Q502X0 79 aa5.3□□□□□ -1.56
SPG11-221ENST00000560299 BTNL3Q6UXE8 466 aa5.3□□□□□ -1.56
SPG11-221ENST00000560299 GLDNQ6ZMI3 551 aaPredicted RBP5.3□□□□□ -1.56
SPG11-221ENST00000560299 C1orf122Q6ZSJ8 110 aa5.3□□□□□ -1.56
SPG11-221ENST00000560299 SLC25A42Q86VD7 318 aa5.3□□□□□ -1.56
SPG11-221ENST00000560299 GLCCI1Q86VQ1 547 aa5.3□□□□□ -1.56
SPG11-221ENST00000560299 SGPP2Q8IWX5 399 aa5.3□□□□□ -1.56
SPG11-221ENST00000560299 LY6G5BQ8NDX9 201 aa5.3□□□□□ -1.56
SPG11-221ENST00000560299 OR52L2PQ8NGH6 319 aa5.3□□□□□ -1.56
SPG11-221ENST00000560299 CLDND2Q8NHS1 167 aa5.3□□□□□ -1.56
SPG11-221ENST00000560299 UBALD1Q8TB05 177 aa5.3□□□□□ -1.56
SPG11-221ENST00000560299 NRGNQ92686 78 aa5.3□□□□□ -1.56
SPG11-221ENST00000560299 C1orf159Q96HA4 380 aa5.3□□□□□ -1.56
SPG11-221ENST00000560299 RSRP1Q9BUV0 290 aa5.3□□□□□ -1.56
SPG11-221ENST00000560299 HEXA-AS1Q9H8Q6 139 aa5.3□□□□□ -1.56
SPG11-221ENST00000560299 GFOD1Q9NXC2 390 aa5.3□□□□□ -1.56
SPG11-221ENST00000560299 OR1A1Q9P1Q5 309 aa5.3□□□□□ -1.56
SPG11-221ENST00000560299 KCNS2Q9ULS6 477 aa5.3□□□□□ -1.56
SPG11-221ENST00000560299 FLVCR2Q9UPI3 526 aa5.3□□□□□ -1.56
SPG11-221ENST00000560299 VSIG4Q9Y279 399 aa5.3□□□□□ -1.56
SPG11-221ENST00000560299 SESN1Q9Y6P5 492 aa5.3□□□□□ -1.56
SPG11-221ENST00000560299 VPS13CQ709C8 3753 aa5.3□□□□□ -1.56
SPG11-221ENST00000560299 ZNF469Q96JG9 3925 aaPredicted RBP5.29□□□□□ -1.56
SPG11-221ENST00000560299 IGHV3-43A0A0B4J1X8 118 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 MEX3AA1L020 520 aaKnown RBP5.29□□□□□ -1.56
SPG11-221ENST00000560299 C17orf98A8MV24 154 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 A8MXK9 166 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 VWC2LB2RUY7 222 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 TOR1AO14656 332 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 RAB29O14966 203 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 PHF1O43189 567 aaPredicted RBP5.29□□□□□ -1.56
SPG11-221ENST00000560299 SSNA1O43805 119 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 HLA-AP01891 365 aaKnown RBP5.29□□□□□ -1.56
SPG11-221ENST00000560299 OR8U9P0C7N5 309 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 IGHV1-8P0DP01 117 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 IGHV3-43DP0DP04 118 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 CCL3L1P16619 93 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 ANXA7P20073 488 aaKnown RBP5.29□□□□□ -1.56
SPG11-221ENST00000560299 OMGP23515 440 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 VAMP1P23763 118 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 GNRHRP30968 328 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 PPP1CCP36873 323 aaKnown RBP5.29□□□□□ -1.56
SPG11-221ENST00000560299 GPR12P47775 334 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 BCAP31P51572 246 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 PIGPP57054 158 aa5.29□□□□□ -1.56
SPG11-221ENST00000560299 LOXL3P58215 753 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms