RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 OR52W1Q6IF63 320 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 C1orf94Q6P1W5 598 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 CD164L2Q6UWJ8 174 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 WDR82Q6UXN9 313 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 ZNF826PQ6ZT77 177 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 C3orf62Q6ZUJ4 267 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 RPS27LQ71UM5 84 aaKnown RBP2.04□□□□□ -2.08
LRRC28-218ENST00000560236 OLIG3Q7RTU3 272 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 DPY19L4Q7Z388 723 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 LCA5Q86VQ0 697 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 STHQ8IWL8 128 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 CTAGE3PQ8IX95 158 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 ZNF561Q8N587 486 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 C10orf53Q8N6V4 93 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 C5orf56Q8N8D9 126 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 TMEM185AQ8NFB2 350 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 OR52L1Q8NGH7 329 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 OR2T27Q8NH04 317 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 OR1F12Q8NHA8 337 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 ZNF596Q8TC21 504 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 TCP10LQ8TDR4 215 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 HIST1H2ACQ93077 130 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 L3HYPDHQ96EM0 354 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 SGTBQ96EQ0 304 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 KCNA7Q96RP8 456 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 ZBTB18Q99592 522 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 COQ7Q99807 217 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 RTBDNQ9BSG5 229 aaPredicted RBP2.04□□□□□ -2.08
LRRC28-218ENST00000560236 ALG12Q9BV10 488 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 NSRP1Q9H0G5 558 aaKnown RBP2.04□□□□□ -2.08
LRRC28-218ENST00000560236 TMEM27Q9HBJ8 222 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 MID1IP1Q9NPA3 183 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 SLCO1B3Q9NPD5 702 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 SAR1AQ9NR31 198 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 NINJ2Q9NZG7 142 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 MARCOQ9UEW3 520 aaPredicted RBP2.04□□□□□ -2.08
LRRC28-218ENST00000560236 ZNF229Q9UJW7 825 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 DIMT1Q9UNQ2 313 aaKnown RBP2.04□□□□□ -2.08
LRRC28-218ENST00000560236 FOXA2Q9Y261 457 aaPredicted RBP2.04□□□□□ -2.08
LRRC28-218ENST00000560236 SIGLEC7Q9Y286 467 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 ZNF443Q9Y2A4 671 aaPredicted RBP2.04□□□□□ -2.08
LRRC28-218ENST00000560236 PIGLQ9Y2B2 252 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 ARL2BPQ9Y2Y0 163 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 SNX24Q9Y343 169 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 UTP11Q9Y3A2 253 aaKnown RBP2.04□□□□□ -2.08
LRRC28-218ENST00000560236 NACAE9PAV3 2078 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 LOC102724200A0A096LPH7 203 aaPredicted RBP2.03□□□□□ -2.08
LRRC28-218ENST00000560236 A0A0A6YYD4 124 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 A0A1B0GWA3 101 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 A0A1W2PRQ8 180 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 TMEM120BA0PK00 339 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 GGT3PA6NGU5 568 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 TMEM210A6NLX4 147 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 CD300LBA8K4G0 201 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 IGLL5B9A064 214 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.03□□□□□ -2.08
LRRC28-218ENST00000560236 RGS16O15492 202 aaPredicted RBP2.03□□□□□ -2.08
LRRC28-218ENST00000560236 TYROBPO43914 113 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 EDF1O60869 148 aaKnown RBP2.03□□□□□ -2.08
LRRC28-218ENST00000560236 SLC2A10O95528 541 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 SERPINA1P01009 418 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 HSPB1P04792 205 aaKnown RBP2.03□□□□□ -2.08
LRRC28-218ENST00000560236 FCER2P06734 321 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 ASAH2BP0C7U1 165 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 CPA3P15088 417 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 ZNF823P16415 610 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 CALB2P22676 271 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 CD24P25063 80 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 UCP1P25874 307 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 CHI3L1P36222 383 aaPredicted RBP2.03□□□□□ -2.08
LRRC28-218ENST00000560236 GABRA2P47869 451 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 CRISP3P54108 245 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 PLTPP55058 493 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 NME5P56597 212 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 ACTA2P62736 377 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 HERV-K104P63124 156 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 RPL38P63173 70 aaKnown RBP2.03□□□□□ -2.08
LRRC28-218ENST00000560236 ACTG2P63267 376 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 ACTC1P68032 377 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 ACTA1P68133 377 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 EWSR1Q01844 656 aaKnown RBP eCLIP2.03□□□□□ -2.08
LRRC28-218ENST00000560236 BDH1Q02338 343 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 CD47Q08722 323 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 LRRC74AQ0VAA2 488 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 RAB40BQ12829 278 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 TATDN3Q17R31 274 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 ANXA8L1Q5VT79 327 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 STEAP1BQ6NZ63 245 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 Q6P435 159 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 TNFAIP8L2Q6P589 184 aaPredicted RBP2.03□□□□□ -2.08
LRRC28-218ENST00000560236 ZYG11AQ6WRX3 759 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 ZCCHC23Q6ZST2 131 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 CCDC80Q76M96 950 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 MRPL21Q7Z2W9 205 aaKnown RBP2.03□□□□□ -2.08
LRRC28-218ENST00000560236 HMGN2P46Q86SG4 172 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 TGIF2LXQ8IUE1 241 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 NKAIN4Q8IVV8 208 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 RIMKLAQ8IXN7 391 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 TRIML2Q8N7C3 387 aa2.03□□□□□ -2.08
LRRC28-218ENST00000560236 OR1M1Q8NGA1 313 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms