RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 LYRM1O43325 122 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 NDUFA2O43678 99 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 CA11O75493 328 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 RBBP9O75884 186 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 RAB3DO95716 219 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 FSHBP01225 129 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 CD74P04233 296 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 AMY2AP04746 511 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 GLAP06280 429 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 CSF1P09603 554 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 OR5H8P0DN80 308 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 AADACP22760 399 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 PTBP1P26599 531 aaKnown RBP eCLIP4.26□□□□□ -1.73
SPG11-220ENST00000559933 ERP29P30040 261 aaKnown RBP4.26□□□□□ -1.73
SPG11-220ENST00000559933 NPY4RP50391 375 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 RAB25P57735 213 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 TAS2R19P59542 299 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 FXYD4P59646 89 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 ACTBP60709 375 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 ARF6P62330 175 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 ACTG1P63261 375 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 PAX2Q02962 417 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 DCTN2Q13561 401 aaKnown RBP4.26□□□□□ -1.73
SPG11-220ENST00000559933 CDK10Q15131 360 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 CHRFAM7AQ494W8 412 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 RUSC1-AS1Q66K80 236 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 STEAP1BQ6NZ63 245 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 LINC00299Q6ZSB3 139 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 IL17RELQ6ZVW7 336 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 TMEM17Q86X19 198 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 C11orf42Q8N5U0 333 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 POC5Q8NA72 575 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 TMEM229BQ8NBD8 167 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 OR5AP2Q8NGF4 316 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 OR51S1Q8NGJ8 323 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 OR5H2Q8NGV7 314 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 PPP1R35Q8TAP8 253 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 ZNF714Q96N38 554 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 SMR3AQ99954 134 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 ZNF2Q9BSG1 426 aaPredicted RBP4.26□□□□□ -1.73
SPG11-220ENST00000559933 PCGF1Q9BSM1 259 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 CABLES2Q9BTV7 478 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 BEX2Q9BXY8 128 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 KRTAP3-1Q9BYR8 98 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 FAM234AQ9H0X4 552 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 DNTTIP1Q9H147 329 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 MMP28Q9H239 520 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 SEBOXQ9HB31 216 aaPredicted RBP4.26□□□□□ -1.73
SPG11-220ENST00000559933 BEX1Q9HBH7 125 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 IDI2-AS1Q9NZ38 188 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 ZNF69Q9UC07 566 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 SOX21Q9Y651 276 aaPredicted RBP4.26□□□□□ -1.73
SPG11-220ENST00000559933 LINC00312Q9Y6C7 94 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 ZFHX3Q15911 3703 aa4.26□□□□□ -1.73
SPG11-220ENST00000559933 KBTBD11-OT1A0A1B0GTJ5 212 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 hADV38S2A0JD32 116 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 A8MXK9 166 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 HSD17B6O14756 317 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 TNFSF12O43508 249 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 FSTL3O95633 263 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 AKAIN1P0CW23 69 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 ZNF728P0DKX0 622 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 SLC25A16P16260 332 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 FCGR2CP31995 323 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 RANBP1P43487 201 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 CBX5P45973 191 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 KCNJ3P48549 501 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 ZNF134P52741 427 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 LOXL3P58215 753 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 DSCR9P59020 149 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 LINC00205P59089 165 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 MRPS10P82664 201 aaKnown RBP4.25□□□□□ -1.73
SPG11-220ENST00000559933 PAX5Q02548 391 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 KRTAP1-1Q07627 177 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 ASAH1Q13510 395 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 DIAPH2-AS1Q14236 149 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 ARL6IP1Q15041 203 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 FAM189A2Q15884 450 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 TMEM249Q2WGJ8 235 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 RNASE10Q5GAN6 216 aaKnown RBP4.25□□□□□ -1.73
SPG11-220ENST00000559933 LDLRAD2Q5SZI1 272 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 C6orf183Q5T699 404 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 AADACL3Q5VUY0 350 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 ZNF660Q6AZW8 331 aaPredicted RBP4.25□□□□□ -1.73
SPG11-220ENST00000559933 HCP5Q6MZN7 132 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 BTNL3Q6UXE8 466 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 MOB1BQ7L9L4 216 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 OVCH2Q7RTZ1 564 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 VMO1Q7Z5L0 202 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 NRARPQ7Z6K4 114 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 H1FOOQ8IZA3 346 aaPredicted RBP4.25□□□□□ -1.73
SPG11-220ENST00000559933 LY6G5BQ8NDX9 201 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 OR5D13Q8NGL4 314 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 OR4A4PQ8NGN8 299 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 OR13C8Q8NGS7 320 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 C8orf46Q8TAG6 207 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 C17orf50Q8WW18 174 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 TOMM40LQ969M1 308 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 UPRTQ96BW1 309 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 RAB39BQ96DA2 213 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms