RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 NFYAP23511 347 aaPredicted RBP12.39□□□□□ -0.43
NEDD1-213ENST00000557644 RCVRNP35243 200 aa12.39□□□□□ -0.43
NEDD1-213ENST00000557644 HRH1P35367 487 aa12.39□□□□□ -0.43
NEDD1-213ENST00000557644 PRRX1P54821 245 aa12.39□□□□□ -0.43
NEDD1-213ENST00000557644 LGALS4P56470 323 aa12.39□□□□□ -0.43
NEDD1-213ENST00000557644 MRPS10P82664 201 aaKnown RBP12.39□□□□□ -0.43
NEDD1-213ENST00000557644 MIDNQ504T8 468 aa12.39□□□□□ -0.43
NEDD1-213ENST00000557644 SLC25A48Q6ZT89 311 aaKnown RBP12.39□□□□□ -0.43
NEDD1-213ENST00000557644 BEND2Q8NDZ0 799 aa12.39□□□□□ -0.43
NEDD1-213ENST00000557644 ZNF596Q8TC21 504 aa12.39□□□□□ -0.43
NEDD1-213ENST00000557644 GINS4Q9BRT9 223 aa12.39□□□□□ -0.43
NEDD1-213ENST00000557644 RABL2AQ9UBK7 228 aaPredicted RBP12.39□□□□□ -0.43
NEDD1-213ENST00000557644 RABL2BQ9UNT1 228 aa12.39□□□□□ -0.43
NEDD1-213ENST00000557644 NF1P21359 2839 aa12.39□□□□□ -0.43
NEDD1-213ENST00000557644 BUB1B-PAK6H3BSN5 160 aa12.38□□□□□ -0.43
NEDD1-213ENST00000557644 ST8SIA5O15466 376 aa12.38□□□□□ -0.43
NEDD1-213ENST00000557644 DIAPH2-AS1Q14236 149 aa12.38□□□□□ -0.43
NEDD1-213ENST00000557644 DYNAPQ8N1N2 210 aa12.38□□□□□ -0.43
NEDD1-213ENST00000557644 Q8N402 240 aa12.38□□□□□ -0.43
NEDD1-213ENST00000557644 MFSD4AQ8N468 514 aa12.38□□□□□ -0.43
NEDD1-213ENST00000557644 OR2AK2Q8NG84 335 aa12.38□□□□□ -0.43
NEDD1-213ENST00000557644 OR10X1Q8NGY0 326 aa12.38□□□□□ -0.43
NEDD1-213ENST00000557644 SLC6A7Q99884 636 aa12.38□□□□□ -0.43
NEDD1-213ENST00000557644 ABHD14AQ9BUJ0 271 aa12.38□□□□□ -0.43
NEDD1-213ENST00000557644 SRRQ9GZT4 340 aa12.38□□□□□ -0.43
NEDD1-213ENST00000557644 RBMX2Q9Y388 322 aaKnown RBP12.38□□□□□ -0.43
NEDD1-213ENST00000557644 HILPDAQ9Y5L2 63 aa12.38□□□□□ -0.43
NEDD1-213ENST00000557644 J3QRK9 145 aa12.38□□□□□ -0.43
NEDD1-213ENST00000557644 GSTZ1O43708 216 aaPredicted RBP12.38□□□□□ -0.43
NEDD1-213ENST00000557644 RGS11O94810 467 aa12.38□□□□□ -0.43
NEDD1-213ENST00000557644 HTR1DP28221 377 aa12.38□□□□□ -0.43
NEDD1-213ENST00000557644 DEFB112Q30KQ8 113 aa12.38□□□□□ -0.43
NEDD1-213ENST00000557644 C9orf139Q6ZV77 190 aa12.38□□□□□ -0.43
NEDD1-213ENST00000557644 LURAP1LQ8IV03 231 aa12.38□□□□□ -0.43
NEDD1-213ENST00000557644 ZNF48Q96MX3 618 aaPredicted RBP12.38□□□□□ -0.43
NEDD1-213ENST00000557644 C11orf54Q9H0W9 315 aaPredicted RBP12.38□□□□□ -0.43
NEDD1-213ENST00000557644 AKIP1Q9NQ31 210 aa12.38□□□□□ -0.43
NEDD1-213ENST00000557644 CD3DP04234 171 aa12.37□□□□□ -0.43
NEDD1-213ENST00000557644 OR5H8P0DN80 308 aa12.37□□□□□ -0.43
NEDD1-213ENST00000557644 BPIFB3P59826 476 aa12.37□□□□□ -0.43
NEDD1-213ENST00000557644 ACTBP60709 375 aa12.37□□□□□ -0.43
NEDD1-213ENST00000557644 ACTG1P63261 375 aa12.37□□□□□ -0.43
NEDD1-213ENST00000557644 CDK10Q15131 360 aa12.37□□□□□ -0.43
NEDD1-213ENST00000557644 SSX2Q16385 188 aa12.37□□□□□ -0.43
NEDD1-213ENST00000557644 H1FOOQ8IZA3 346 aaPredicted RBP12.37□□□□□ -0.43
NEDD1-213ENST00000557644 SDHCQ99643 169 aaPredicted RBP12.37□□□□□ -0.43
NEDD1-213ENST00000557644 THAP7Q9BT49 309 aaPredicted RBP12.37□□□□□ -0.43
NEDD1-213ENST00000557644 NECAP2Q9NVZ3 263 aa12.37□□□□□ -0.43
NEDD1-213ENST00000557644 EHFQ9NZC4 300 aa12.37□□□□□ -0.43
NEDD1-213ENST00000557644 JMJD1CQ15652 2540 aa12.37□□□□□ -0.43
NEDD1-213ENST00000557644 M0QYG6 137 aa12.37□□□□□ -0.43
NEDD1-213ENST00000557644 DIRAS3O95661 229 aa12.37□□□□□ -0.43
NEDD1-213ENST00000557644 CTXN2P0C2S0 81 aa12.37□□□□□ -0.43
NEDD1-213ENST00000557644 PTBP1P26599 531 aaKnown RBP eCLIP12.37□□□□□ -0.43
NEDD1-213ENST00000557644 Q3ZCU0 254 aa12.37□□□□□ -0.43
NEDD1-213ENST00000557644 OVCH2Q7RTZ1 564 aa12.37□□□□□ -0.43
NEDD1-213ENST00000557644 LDLRAD3Q86YD5 345 aa12.37□□□□□ -0.43
NEDD1-213ENST00000557644 LINC00311Q8N616 119 aa12.37□□□□□ -0.43
NEDD1-213ENST00000557644 C8orf31Q8N9H6 132 aa12.37□□□□□ -0.43
NEDD1-213ENST00000557644 OR5H2Q8NGV7 314 aa12.37□□□□□ -0.43
NEDD1-213ENST00000557644 ABHD14BQ96IU4 210 aa12.37□□□□□ -0.43
NEDD1-213ENST00000557644 AGMATQ9BSE5 352 aa12.37□□□□□ -0.43
NEDD1-213ENST00000557644 IFI27L2Q9H2X8 130 aa12.37□□□□□ -0.43
NEDD1-213ENST00000557644 RNF150Q9ULK6 438 aa12.37□□□□□ -0.43
NEDD1-213ENST00000557644 LY6LH3BQJ8 138 aa12.36□□□□□ -0.43
NEDD1-213ENST00000557644 FAM157CP0CG43 387 aa12.36□□□□□ -0.43
NEDD1-213ENST00000557644 OR3A3P47888 321 aa12.36□□□□□ -0.43
NEDD1-213ENST00000557644 PLA1AQ53H76 456 aa12.36□□□□□ -0.43
NEDD1-213ENST00000557644 ODF3L1Q8IXM7 274 aa12.36□□□□□ -0.43
NEDD1-213ENST00000557644 LYG1Q8N1E2 194 aa12.36□□□□□ -0.43
NEDD1-213ENST00000557644 OR4D10Q8NGI6 311 aa12.36□□□□□ -0.43
NEDD1-213ENST00000557644 TRIM63Q969Q1 353 aa12.36□□□□□ -0.43
NEDD1-213ENST00000557644 TOLLIPQ9H0E2 274 aa12.36□□□□□ -0.43
NEDD1-213ENST00000557644 DPM3Q9P2X0 92 aa12.36□□□□□ -0.43
NEDD1-213ENST00000557644 FAM96BQ9Y3D0 163 aa12.36□□□□□ -0.43
NEDD1-213ENST00000557644 TBL2Q9Y4P3 447 aaKnown RBP12.36□□□□□ -0.43
NEDD1-213ENST00000557644 ZNF736B4DX44 427 aaPredicted RBP12.36□□□□□ -0.43
NEDD1-213ENST00000557644 OR8U9P0C7N5 309 aa12.36□□□□□ -0.43
NEDD1-213ENST00000557644 FCGR2CP31995 323 aa12.36□□□□□ -0.43
NEDD1-213ENST00000557644 REG1BP48304 166 aa12.36□□□□□ -0.43
NEDD1-213ENST00000557644 TAS2R46P59540 309 aa12.36□□□□□ -0.43
NEDD1-213ENST00000557644 BAK1Q16611 211 aa12.36□□□□□ -0.43
NEDD1-213ENST00000557644 LY6G6FQ5SQ64 297 aa12.36□□□□□ -0.43
NEDD1-213ENST00000557644 MINOS1Q5TGZ0 78 aa12.36□□□□□ -0.43
NEDD1-213ENST00000557644 OR8U1Q8NH10 309 aa12.36□□□□□ -0.43
NEDD1-213ENST00000557644 TINAGL1Q9GZM7 467 aaPredicted RBP12.36□□□□□ -0.43
NEDD1-213ENST00000557644 OCEL1Q9H607 264 aa12.36□□□□□ -0.43
NEDD1-213ENST00000557644 MINOS1-NBL1R4GNA1 71 aa12.36□□□□□ -0.43
NEDD1-213ENST00000557644 ZNF45Q02386 682 aa12.35□□□□□ -0.43
NEDD1-213ENST00000557644 FAAP20Q6NZ36 180 aa12.35□□□□□ -0.43
NEDD1-213ENST00000557644 LINC00299Q6ZSB3 139 aa12.35□□□□□ -0.43
NEDD1-213ENST00000557644 EDARADDQ8WWZ3 215 aa12.35□□□□□ -0.43
NEDD1-213ENST00000557644 IGKV1D-13A0A0B4J2D9 117 aa12.35□□□□□ -0.43
NEDD1-213ENST00000557644 LEUTXA8MZ59 168 aa12.35□□□□□ -0.43
NEDD1-213ENST00000557644 IGKV1-13P0DP09 117 aa12.35□□□□□ -0.43
NEDD1-213ENST00000557644 DYRK1AQ13627 763 aa12.35□□□□□ -0.43
NEDD1-213ENST00000557644 TUSC1Q2TAM9 212 aa12.35□□□□□ -0.43
NEDD1-213ENST00000557644 TPTE2P1Q5T6R2 138 aa12.35□□□□□ -0.43
NEDD1-213ENST00000557644 SIGLECL1Q8N7X8 197 aa12.35□□□□□ -0.43
NEDD1-213ENST00000557644 ST6GALNAC6Q969X2 333 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms