RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 ARFGEF3Q5TH69 2177 aa10.36□□□□□ -0.75
SHMT2-233ENST00000557529 C19orf84I3L1E1 186 aa10.35□□□□□ -0.75
SHMT2-233ENST00000557529 L7N2F9 121 aa10.35□□□□□ -0.75
SHMT2-233ENST00000557529 RGS13O14921 159 aa10.35□□□□□ -0.75
SHMT2-233ENST00000557529 ARPC5O15511 151 aa10.35□□□□□ -0.75
SHMT2-233ENST00000557529 MPC2O95563 127 aa10.35□□□□□ -0.75
SHMT2-233ENST00000557529 CDS2O95674 445 aa10.35□□□□□ -0.75
SHMT2-233ENST00000557529 PET100P0DJ07 73 aa10.35□□□□□ -0.75
SHMT2-233ENST00000557529 GNMTQ14749 295 aa10.35□□□□□ -0.75
SHMT2-233ENST00000557529 IAH1Q2TAA2 248 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-233ENST00000557529 TMEM268Q5VZI3 342 aa10.35□□□□□ -0.75
SHMT2-233ENST00000557529 MEX3BQ6ZN04 569 aaKnown RBP10.35□□□□□ -0.75
SHMT2-233ENST00000557529 ZNF695Q8IW36 515 aa10.35□□□□□ -0.75
SHMT2-233ENST00000557529 ZNF843Q8N446 348 aa10.35□□□□□ -0.75
SHMT2-233ENST00000557529 OR10C1Q96KK4 312 aa10.35□□□□□ -0.75
SHMT2-233ENST00000557529 LINC00574Q9H8X3 128 aa10.35□□□□□ -0.75
SHMT2-233ENST00000557529 LIN7CQ9NUP9 197 aaKnown RBP10.35□□□□□ -0.75
SHMT2-233ENST00000557529 TAS2R3Q9NYW6 316 aa10.35□□□□□ -0.75
SHMT2-233ENST00000557529 LINC00312Q9Y6C7 94 aa10.35□□□□□ -0.75
SHMT2-233ENST00000557529 TANC2Q9HCD6 1990 aa10.34□□□□□ -0.75
SHMT2-233ENST00000557529 A6NNC1 897 aa10.34□□□□□ -0.75
SHMT2-233ENST00000557529 ITGB1BP1O14713 200 aa10.34□□□□□ -0.75
SHMT2-233ENST00000557529 TNFSF12O43508 249 aa10.34□□□□□ -0.75
SHMT2-233ENST00000557529 IGLV2-14P01704 120 aa10.34□□□□□ -0.75
SHMT2-233ENST00000557529 SERPINE2P07093 398 aa10.34□□□□□ -0.75
SHMT2-233ENST00000557529 SOD3P08294 240 aa10.34□□□□□ -0.75
SHMT2-233ENST00000557529 RPA2P15927 270 aa10.34□□□□□ -0.75
SHMT2-233ENST00000557529 COL8A2P25067 703 aa10.34□□□□□ -0.75
SHMT2-233ENST00000557529 IFITM2Q01629 132 aa10.34□□□□□ -0.75
SHMT2-233ENST00000557529 IL15RAQ13261 267 aa10.34□□□□□ -0.75
SHMT2-233ENST00000557529 C17orf58Q2M2W7 97 aa10.34□□□□□ -0.75
SHMT2-233ENST00000557529 LRRC37A5PQ49AS3 106 aa10.34□□□□□ -0.75
SHMT2-233ENST00000557529 MORN2Q502X0 79 aa10.34□□□□□ -0.75
SHMT2-233ENST00000557529 ESCO2Q56NI9 601 aa10.34□□□□□ -0.75
SHMT2-233ENST00000557529 LYZL2Q7Z4W2 148 aa10.34□□□□□ -0.75
SHMT2-233ENST00000557529 ZNF546Q86UE3 836 aa10.34□□□□□ -0.75
SHMT2-233ENST00000557529 DRAM1Q8N682 238 aa10.34□□□□□ -0.75
SHMT2-233ENST00000557529 TCTEX1D1Q8N7M0 179 aa10.34□□□□□ -0.75
SHMT2-233ENST00000557529 OR10A7Q8NGE5 316 aa10.34□□□□□ -0.75
SHMT2-233ENST00000557529 OR52M1Q8NGK5 317 aa10.34□□□□□ -0.75
SHMT2-233ENST00000557529 SPIN2AQ99865 258 aa10.34□□□□□ -0.75
SHMT2-233ENST00000557529 SPIN2BQ9BPZ2 258 aa10.34□□□□□ -0.75
SHMT2-233ENST00000557529 OR2D2Q9H210 308 aa10.34□□□□□ -0.75
SHMT2-233ENST00000557529 GAL3ST2Q9H3Q3 398 aa10.34□□□□□ -0.75
SHMT2-233ENST00000557529 PLEKHF2Q9H8W4 249 aa10.34□□□□□ -0.75
SHMT2-233ENST00000557529 ZFP57Q9NU63 452 aa10.34□□□□□ -0.75
SHMT2-233ENST00000557529 PAIP2BQ9ULR5 123 aaKnown RBP10.34□□□□□ -0.75
SHMT2-233ENST00000557529 KALRNO60229 2985 aa10.34□□□□□ -0.75
SHMT2-233ENST00000557529 SPTBN1Q01082 2364 aaKnown RBP10.33□□□□□ -0.76
SHMT2-233ENST00000557529 DSCAMO60469 2012 aa10.33□□□□□ -0.76
SHMT2-233ENST00000557529 IGHV3-43A0A0B4J1X8 118 aa10.33□□□□□ -0.76
SHMT2-233ENST00000557529 MPTX1A8MV57 137 aa10.33□□□□□ -0.76
SHMT2-233ENST00000557529 RP2O75695 350 aa10.33□□□□□ -0.76
SHMT2-233ENST00000557529 PRB1P04280 392 aa10.33□□□□□ -0.76
SHMT2-233ENST00000557529 IGHV3-43DP0DP04 118 aa10.33□□□□□ -0.76
SHMT2-233ENST00000557529 CXCL2P19875 107 aa10.33□□□□□ -0.76
SHMT2-233ENST00000557529 RAB7AP51149 207 aa10.33□□□□□ -0.76
SHMT2-233ENST00000557529 LOXL3P58215 753 aa10.33□□□□□ -0.76
SHMT2-233ENST00000557529 RPL31P62899 125 aaKnown RBP10.33□□□□□ -0.76
SHMT2-233ENST00000557529 CATR1Q13166 79 aa10.33□□□□□ -0.76
SHMT2-233ENST00000557529 LTC4SQ16873 150 aa10.33□□□□□ -0.76
SHMT2-233ENST00000557529 LYPD2Q6UXB3 125 aa10.33□□□□□ -0.76
SHMT2-233ENST00000557529 SELENOHQ8IZQ5 122 aaKnown RBP10.33□□□□□ -0.76
SHMT2-233ENST00000557529 SLC35G3Q8N808 338 aa10.33□□□□□ -0.76
SHMT2-233ENST00000557529 OR51H1Q8NH63 302 aa10.33□□□□□ -0.76
SHMT2-233ENST00000557529 LHFPL5Q8TAF8 219 aa10.33□□□□□ -0.76
SHMT2-233ENST00000557529 RBPMSQ93062 196 aaKnown RBP10.33□□□□□ -0.76
SHMT2-233ENST00000557529 TIMD4Q96H15 378 aa10.33□□□□□ -0.76
SHMT2-233ENST00000557529 MFFQ9GZY8 342 aa10.33□□□□□ -0.76
SHMT2-233ENST00000557529 GFOD1Q9NXC2 390 aa10.33□□□□□ -0.76
SHMT2-233ENST00000557529 IDI2-AS1Q9NZ38 188 aa10.33□□□□□ -0.76
SHMT2-233ENST00000557529 GSKIPQ9P0R6 139 aa10.33□□□□□ -0.76
SHMT2-233ENST00000557529 PSG11Q9UQ72 335 aa10.33□□□□□ -0.76
SHMT2-233ENST00000557529 KLF2Q9Y5W3 355 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-233ENST00000557529 KIAA2026Q5HYC2 2103 aa10.33□□□□□ -0.76
SHMT2-233ENST00000557529 ABCA4P78363 2273 aa10.32□□□□□ -0.76
SHMT2-233ENST00000557529 A0A0D9SG52 128 aa10.32□□□□□ -0.76
SHMT2-233ENST00000557529 MEX3AA1L020 520 aaKnown RBP10.32□□□□□ -0.76
SHMT2-233ENST00000557529 DVL1O14640 695 aa10.32□□□□□ -0.76
SHMT2-233ENST00000557529 OR2F2O95006 317 aa10.32□□□□□ -0.76
SHMT2-233ENST00000557529 IGHV2-70P01814 119 aa10.32□□□□□ -0.76
SHMT2-233ENST00000557529 LYL1P12980 280 aa10.32□□□□□ -0.76
SHMT2-233ENST00000557529 VDAC1P21796 283 aa10.32□□□□□ -0.76
SHMT2-233ENST00000557529 OR2F1Q13607 317 aa10.32□□□□□ -0.76
SHMT2-233ENST00000557529 PRSS54Q6PEW0 395 aa10.32□□□□□ -0.76
SHMT2-233ENST00000557529 ZNF66Q6ZN08 573 aa10.32□□□□□ -0.76
SHMT2-233ENST00000557529 TCF23Q7RTU1 214 aa10.32□□□□□ -0.76
SHMT2-233ENST00000557529 RAB1CQ92928 201 aa10.32□□□□□ -0.76
SHMT2-233ENST00000557529 AGMATQ9BSE5 352 aa10.32□□□□□ -0.76
SHMT2-233ENST00000557529 UBTD1Q9HAC8 227 aa10.32□□□□□ -0.76
SHMT2-233ENST00000557529 FAM212BQ9NTI7 297 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-233ENST00000557529 MBD2Q9UBB5 411 aa10.32□□□□□ -0.76
SHMT2-233ENST00000557529 RNF150Q9ULK6 438 aa10.32□□□□□ -0.76
SHMT2-233ENST00000557529 TNFSF18Q9UNG2 199 aa10.32□□□□□ -0.76
SHMT2-233ENST00000557529 LAMP3Q9UQV4 416 aa10.32□□□□□ -0.76
SHMT2-233ENST00000557529 CFAP46Q8IYW2 2715 aa10.32□□□□□ -0.76
SHMT2-233ENST00000557529 RAI1Q7Z5J4 1906 aaPredicted RBP10.31□□□□□ -0.76
SHMT2-233ENST00000557529 TRBV23-1A0A0A0MS06 115 aa10.31□□□□□ -0.76
SHMT2-233ENST00000557529 A0A1W2PPR1 153 aa10.31□□□□□ -0.76
SHMT2-233ENST00000557529 LYNX1G3V0Z9 82 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms