RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 OPN1MW2P0DN77 364 aa13.01□□□□□ -0.33
TMEM55B-207ENST00000557041 OPN1MW3P0DN78 364 aa13.01□□□□□ -0.33
TMEM55B-207ENST00000557041 CLN8Q9UBY8 286 aa13.01□□□□□ -0.33
TMEM55B-207ENST00000557041 CACFD1Q9UGQ2 172 aa13.01□□□□□ -0.33
TMEM55B-207ENST00000557041 ZNF727A8MUV8 499 aa13□□□□□ -0.33
TMEM55B-207ENST00000557041 SYNGR2O43760 224 aa13□□□□□ -0.33
TMEM55B-207ENST00000557041 EIF4E3Q8N5X7 224 aaKnown RBP13□□□□□ -0.33
TMEM55B-207ENST00000557041 MDS2Q8NDY4 140 aa13□□□□□ -0.33
TMEM55B-207ENST00000557041 SNIP1Q8TAD8 396 aaKnown RBP13□□□□□ -0.33
TMEM55B-207ENST00000557041 C18orf12Q96KH6 178 aa13□□□□□ -0.33
TMEM55B-207ENST00000557041 USB1Q9BQ65 265 aaKnown RBP13□□□□□ -0.33
TMEM55B-207ENST00000557041 OPA3Q9H6K4 179 aa13□□□□□ -0.33
TMEM55B-207ENST00000557041 PARP11Q9NR21 331 aa13□□□□□ -0.33
TMEM55B-207ENST00000557041 IL36GQ9NZH8 169 aa13□□□□□ -0.33
TMEM55B-207ENST00000557041 TMEM30CPA0ZSE6 113 aa13□□□□□ -0.33
TMEM55B-207ENST00000557041 IFNA10P01566 189 aa13□□□□□ -0.33
TMEM55B-207ENST00000557041 MST1LQ2TV78 715 aa13□□□□□ -0.33
TMEM55B-207ENST00000557041 ZNF528Q3MIS6 628 aa13□□□□□ -0.33
TMEM55B-207ENST00000557041 COLCA1Q6ZS62 124 aa13□□□□□ -0.33
TMEM55B-207ENST00000557041 H2BFWTQ7Z2G1 175 aa13□□□□□ -0.33
TMEM55B-207ENST00000557041 RNF122Q9H9V4 155 aa13□□□□□ -0.33
TMEM55B-207ENST00000557041 PSPNO60542 156 aa13□□□□□ -0.33
TMEM55B-207ENST00000557041 SNRPEP62304 92 aaKnown RBP13□□□□□ -0.33
TMEM55B-207ENST00000557041 PDZD11Q5EBL8 140 aa13□□□□□ -0.33
TMEM55B-207ENST00000557041 OR51I2Q9H344 312 aa13□□□□□ -0.33
TMEM55B-207ENST00000557041 LIN7CQ9NUP9 197 aaKnown RBP13□□□□□ -0.33
TMEM55B-207ENST00000557041 FCGR3BO75015 233 aa12.99□□□□□ -0.33
TMEM55B-207ENST00000557041 CECR9P0C854 216 aa12.99□□□□□ -0.33
TMEM55B-207ENST00000557041 TMEM171Q8WVE6 324 aa12.99□□□□□ -0.33
TMEM55B-207ENST00000557041 AIFM2Q9BRQ8 373 aa12.99□□□□□ -0.33
TMEM55B-207ENST00000557041 GLRX2Q9NS18 164 aa12.99□□□□□ -0.33
TMEM55B-207ENST00000557041 SLC39A9Q9NUM3 307 aa12.99□□□□□ -0.33
TMEM55B-207ENST00000557041 GAPDHP04406 335 aaKnown RBP12.99□□□□□ -0.33
TMEM55B-207ENST00000557041 SEC11BP0C7V7 166 aa12.99□□□□□ -0.33
TMEM55B-207ENST00000557041 COL10A1Q03692 680 aa12.99□□□□□ -0.33
TMEM55B-207ENST00000557041 TLE4Q04727 773 aa12.99□□□□□ -0.33
TMEM55B-207ENST00000557041 CATR1Q13166 79 aa12.99□□□□□ -0.33
TMEM55B-207ENST00000557041 MOGAT3Q86VF5 341 aa12.99□□□□□ -0.33
TMEM55B-207ENST00000557041 SPINT2O43291 252 aa12.98□□□□□ -0.33
TMEM55B-207ENST00000557041 NAPSAO96009 420 aa12.98□□□□□ -0.33
TMEM55B-207ENST00000557041 HBZP02008 142 aa12.98□□□□□ -0.33
TMEM55B-207ENST00000557041 HBG1P69891 147 aa12.98□□□□□ -0.33
TMEM55B-207ENST00000557041 HBG2P69892 147 aa12.98□□□□□ -0.33
TMEM55B-207ENST00000557041 WFDC8Q8IUA0 241 aa12.98□□□□□ -0.33
TMEM55B-207ENST00000557041 VKORC1L1Q8N0U8 176 aa12.98□□□□□ -0.33
TMEM55B-207ENST00000557041 DRAM1Q8N682 238 aa12.98□□□□□ -0.33
TMEM55B-207ENST00000557041 ZNRF1Q8ND25 227 aa12.98□□□□□ -0.33
TMEM55B-207ENST00000557041 LOXL4Q96JB6 756 aa12.98□□□□□ -0.33
TMEM55B-207ENST00000557041 SMIM8Q96KF7 97 aa12.98□□□□□ -0.33
TMEM55B-207ENST00000557041 IFNA4P05014 189 aa12.98□□□□□ -0.33
TMEM55B-207ENST00000557041 COX5BP10606 129 aa12.98□□□□□ -0.33
TMEM55B-207ENST00000557041 C4orf17Q53FE4 359 aa12.98□□□□□ -0.33
TMEM55B-207ENST00000557041 SLC35B3Q9H1N7 401 aa12.98□□□□□ -0.33
TMEM55B-207ENST00000557041 GFOD1Q9NXC2 390 aa12.98□□□□□ -0.33
TMEM55B-207ENST00000557041 PLA2G2EQ9NZK7 142 aa12.98□□□□□ -0.33
TMEM55B-207ENST00000557041 YLPM1P49750 1951 aaKnown RBP12.98□□□□□ -0.33
TMEM55B-207ENST00000557041 OR2C1O95371 312 aa12.98□□□□□ -0.33
TMEM55B-207ENST00000557041 TMEM50AO95807 157 aa12.98□□□□□ -0.33
TMEM55B-207ENST00000557041 UCP3P55916 312 aa12.98□□□□□ -0.33
TMEM55B-207ENST00000557041 FGFRL1Q8N441 504 aa12.98□□□□□ -0.33
TMEM55B-207ENST00000557041 NECAP1Q8NC96 275 aa12.98□□□□□ -0.33
TMEM55B-207ENST00000557041 RPUSD4Q96CM3 377 aaKnown RBP12.98□□□□□ -0.33
TMEM55B-207ENST00000557041 SLC25A22Q9H936 323 aa12.98□□□□□ -0.33
TMEM55B-207ENST00000557041 HEYLQ9NQ87 328 aaPredicted RBP12.98□□□□□ -0.33
TMEM55B-207ENST00000557041 METRNQ9UJH8 293 aa12.98□□□□□ -0.33
TMEM55B-207ENST00000557041 ZDHHC8Q9ULC8 765 aa12.98□□□□□ -0.33
TMEM55B-207ENST00000557041 A0A0U1RQK1 487 aa12.97□□□□□ -0.33
TMEM55B-207ENST00000557041 KIAA1324LA8MWY0 1029 aaPredicted RBP12.97□□□□□ -0.33
TMEM55B-207ENST00000557041 M0R1X1 148 aa12.97□□□□□ -0.33
TMEM55B-207ENST00000557041 DANCRP0C864 163 aa12.97□□□□□ -0.33
TMEM55B-207ENST00000557041 GPR12P47775 334 aa12.97□□□□□ -0.33
TMEM55B-207ENST00000557041 GNG10P50151 68 aa12.97□□□□□ -0.33
TMEM55B-207ENST00000557041 IL24Q13007 206 aa12.97□□□□□ -0.33
TMEM55B-207ENST00000557041 ZNF787Q6DD87 383 aa12.97□□□□□ -0.33
TMEM55B-207ENST00000557041 ASCL4Q6XD76 172 aa12.97□□□□□ -0.33
TMEM55B-207ENST00000557041 Q6ZRM9 215 aa12.97□□□□□ -0.33
TMEM55B-207ENST00000557041 LRP11Q86VZ4 500 aa12.97□□□□□ -0.33
TMEM55B-207ENST00000557041 ZCCHC24Q8N2G6 241 aaKnown RBP12.97□□□□□ -0.33
TMEM55B-207ENST00000557041 RPRMLQ8N4K4 120 aa12.97□□□□□ -0.33
TMEM55B-207ENST00000557041 PARD6AQ9NPB6 346 aa12.97□□□□□ -0.33
TMEM55B-207ENST00000557041 WSB1Q9Y6I7 421 aa12.97□□□□□ -0.33
TMEM55B-207ENST00000557041 RAMP3O60896 148 aa12.97□□□□□ -0.33
TMEM55B-207ENST00000557041 MSMO1Q15800 293 aa12.97□□□□□ -0.33
TMEM55B-207ENST00000557041 SMIM21Q3B7S5 101 aa12.97□□□□□ -0.33
TMEM55B-207ENST00000557041 PRAMEF5Q5TYX0 476 aa12.97□□□□□ -0.33
TMEM55B-207ENST00000557041 WDR86Q86TI4 376 aa12.97□□□□□ -0.33
TMEM55B-207ENST00000557041 GTF3AQ92664 365 aaKnown RBP12.97□□□□□ -0.33
TMEM55B-207ENST00000557041 LHX4Q969G2 390 aa12.97□□□□□ -0.33
TMEM55B-207ENST00000557041 NIPSNAP3BQ9BS92 247 aa12.97□□□□□ -0.33
TMEM55B-207ENST00000557041 SPRY4Q9C004 299 aa12.97□□□□□ -0.33
TMEM55B-207ENST00000557041 DFFBO76075 338 aa12.97□□□□□ -0.33
TMEM55B-207ENST00000557041 DEFA4P12838 97 aa12.97□□□□□ -0.33
TMEM55B-207ENST00000557041 NDUFB7P17568 137 aa12.97□□□□□ -0.33
TMEM55B-207ENST00000557041 SNCAP37840 140 aa12.97□□□□□ -0.33
TMEM55B-207ENST00000557041 Q6ZT83 130 aa12.97□□□□□ -0.33
TMEM55B-207ENST00000557041 GNPNAT1Q96EK6 184 aaPredicted RBP12.97□□□□□ -0.33
TMEM55B-207ENST00000557041 BIN3Q9NQY0 253 aa12.97□□□□□ -0.33
TMEM55B-207ENST00000557041 RBFOX3A6NFN3 312 aa12.96□□□□□ -0.33
TMEM55B-207ENST00000557041 C12orf77C9JDV5 145 aa12.96□□□□□ -0.33
TMEM55B-207ENST00000557041 CD55P08174 381 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms