RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 ABCB10Q9NRK6 738 aa14.1□□□□□ -0.15
SHMT2-225ENST00000556798 CCDC59Q9P031 241 aaKnown RBP14.1□□□□□ -0.15
SHMT2-225ENST00000556798 VPREB3Q9UKI3 123 aa14.1□□□□□ -0.15
SHMT2-225ENST00000556798 COL6A5A8TX70 2615 aa14.1□□□□□ -0.15
SHMT2-225ENST00000556798 VGLL3A8MV65 326 aa14.09□□□□□ -0.15
SHMT2-225ENST00000556798 HSPA12AO43301 675 aa14.09□□□□□ -0.15
SHMT2-225ENST00000556798 GPR137BO60478 399 aa14.09□□□□□ -0.15
SHMT2-225ENST00000556798 YPEL1O60688 119 aa14.09□□□□□ -0.15
SHMT2-225ENST00000556798 RGS11O94810 467 aa14.09□□□□□ -0.15
SHMT2-225ENST00000556798 MNDAP41218 407 aa14.09□□□□□ -0.15
SHMT2-225ENST00000556798 KIR2DS4P43632 304 aa14.09□□□□□ -0.15
SHMT2-225ENST00000556798 REG1BP48304 166 aa14.09□□□□□ -0.15
SHMT2-225ENST00000556798 PITPNAQ00169 270 aa14.09□□□□□ -0.15
SHMT2-225ENST00000556798 KIR2DS1Q14954 304 aa14.09□□□□□ -0.15
SHMT2-225ENST00000556798 AANATQ16613 207 aa14.09□□□□□ -0.15
SHMT2-225ENST00000556798 IGSF11Q5DX21 431 aa14.09□□□□□ -0.15
SHMT2-225ENST00000556798 C16orf87Q6PH81 154 aa14.09□□□□□ -0.15
SHMT2-225ENST00000556798 LYG1Q8N1E2 194 aa14.09□□□□□ -0.15
SHMT2-225ENST00000556798 OR5R1Q8NH85 324 aa14.09□□□□□ -0.15
SHMT2-225ENST00000556798 YPEL2Q96QA6 119 aa14.09□□□□□ -0.15
SHMT2-225ENST00000556798 MEIS3P1A6NDR6 274 aa14.08□□□□□ -0.16
SHMT2-225ENST00000556798 FAM181BA6NEQ2 426 aa14.08□□□□□ -0.16
SHMT2-225ENST00000556798 FAM25AB3EWG3 89 aa14.08□□□□□ -0.16
SHMT2-225ENST00000556798 FAM25CB3EWG5 89 aa14.08□□□□□ -0.16
SHMT2-225ENST00000556798 FAM25GB3EWG6 89 aa14.08□□□□□ -0.16
SHMT2-225ENST00000556798 HSD17B6O14756 317 aa14.08□□□□□ -0.16
SHMT2-225ENST00000556798 BET1O15155 118 aa14.08□□□□□ -0.16
SHMT2-225ENST00000556798 ST8SIA5O15466 376 aa14.08□□□□□ -0.16
SHMT2-225ENST00000556798 FCER2P06734 321 aa14.08□□□□□ -0.16
SHMT2-225ENST00000556798 CD24P25063 80 aa14.08□□□□□ -0.16
SHMT2-225ENST00000556798 CEACAM6P40199 344 aa14.08□□□□□ -0.16
SHMT2-225ENST00000556798 ACTG1P63261 375 aa14.08□□□□□ -0.16
SHMT2-225ENST00000556798 OR2AK2Q8NG84 335 aa14.08□□□□□ -0.16
SHMT2-225ENST00000556798 OR4A4PQ8NGN8 299 aa14.08□□□□□ -0.16
SHMT2-225ENST00000556798 CMTM3Q96MX0 182 aa14.08□□□□□ -0.16
SHMT2-225ENST00000556798 RSL24D1Q9UHA3 163 aaKnown RBP14.08□□□□□ -0.16
SHMT2-225ENST00000556798 A0A1W2PPI3 338 aa14.07□□□□□ -0.16
SHMT2-225ENST00000556798 ZBTB25P24278 435 aa14.07□□□□□ -0.16
SHMT2-225ENST00000556798 IL3RAP26951 378 aa14.07□□□□□ -0.16
SHMT2-225ENST00000556798 FBLN7Q53RD9 439 aa14.07□□□□□ -0.16
SHMT2-225ENST00000556798 Q6ZS49 121 aa14.07□□□□□ -0.16
SHMT2-225ENST00000556798 LAX1Q8IWV1 398 aa14.07□□□□□ -0.16
SHMT2-225ENST00000556798 GVQW1Q8N7I0 195 aa14.07□□□□□ -0.16
SHMT2-225ENST00000556798 DCUN1D5Q9BTE7 237 aa14.07□□□□□ -0.16
SHMT2-225ENST00000556798 CABLES2Q9BTV7 478 aa14.07□□□□□ -0.16
SHMT2-225ENST00000556798 MIXL1Q9H2W2 232 aa14.07□□□□□ -0.16
SHMT2-225ENST00000556798 TCF19Q9Y242 345 aa14.07□□□□□ -0.16
SHMT2-225ENST00000556798 MRPS7Q9Y2R9 242 aaKnown RBP14.07□□□□□ -0.16
SHMT2-225ENST00000556798 OOSP1A8MZH6 123 aa14.06□□□□□ -0.16
SHMT2-225ENST00000556798 CTDSP2O14595 271 aa14.06□□□□□ -0.16
SHMT2-225ENST00000556798 TIMM23O14925 209 aa14.06□□□□□ -0.16
SHMT2-225ENST00000556798 RGS5O15539 181 aa14.06□□□□□ -0.16
SHMT2-225ENST00000556798 CHST1O43916 411 aa14.06□□□□□ -0.16
SHMT2-225ENST00000556798 SRSF7Q16629 238 aaKnown RBP eCLIP14.06□□□□□ -0.16
SHMT2-225ENST00000556798 LY6G6FQ5SQ64 297 aa14.06□□□□□ -0.16
SHMT2-225ENST00000556798 CCDC144NLQ6NUI1 221 aa14.06□□□□□ -0.16
SHMT2-225ENST00000556798 CCBE1Q6UXH8 406 aaPredicted RBP14.06□□□□□ -0.16
SHMT2-225ENST00000556798 TMEM219Q86XT9 240 aa14.06□□□□□ -0.16
SHMT2-225ENST00000556798 ODF3L1Q8IXM7 274 aa14.06□□□□□ -0.16
SHMT2-225ENST00000556798 OR56B4Q8NH76 319 aa14.06□□□□□ -0.16
SHMT2-225ENST00000556798 ST6GALNAC6Q969X2 333 aa14.06□□□□□ -0.16
SHMT2-225ENST00000556798 SLIRPQ9GZT3 109 aaKnown RBP14.06□□□□□ -0.16
SHMT2-225ENST00000556798 IFI27L2Q9H2X8 130 aa14.06□□□□□ -0.16
SHMT2-225ENST00000556798 RDH8Q9NYR8 311 aa14.06□□□□□ -0.16
SHMT2-225ENST00000556798 EXTL2Q9UBQ6 330 aa14.06□□□□□ -0.16
SHMT2-225ENST00000556798 SAA2-SAA4A0A096LPE2 208 aa14.05□□□□□ -0.16
SHMT2-225ENST00000556798 SMIM31A0A1B0GVY4 71 aa14.05□□□□□ -0.16
SHMT2-225ENST00000556798 HLA-DQB1P01920 261 aa14.05□□□□□ -0.16
SHMT2-225ENST00000556798 SAA2P0DJI9 122 aaPredicted RBP14.05□□□□□ -0.16
SHMT2-225ENST00000556798 BRS3P32247 399 aa14.05□□□□□ -0.16
SHMT2-225ENST00000556798 OR3A3P47888 321 aa14.05□□□□□ -0.16
SHMT2-225ENST00000556798 RAB7AP51149 207 aa14.05□□□□□ -0.16
SHMT2-225ENST00000556798 DYNLT3P51808 116 aa14.05□□□□□ -0.16
SHMT2-225ENST00000556798 ARHGDIBP52566 201 aa14.05□□□□□ -0.16
SHMT2-225ENST00000556798 ZNF816Q0VGE8 651 aaPredicted RBP14.05□□□□□ -0.16
SHMT2-225ENST00000556798 SNX29P2Q8IUI4 249 aa14.05□□□□□ -0.16
SHMT2-225ENST00000556798 DRAM1Q8N682 238 aa14.05□□□□□ -0.16
SHMT2-225ENST00000556798 OR10J5Q8NHC4 309 aa14.05□□□□□ -0.16
SHMT2-225ENST00000556798 RTN4IP1Q8WWV3 396 aaPredicted RBP14.05□□□□□ -0.16
SHMT2-225ENST00000556798 ABHD14BQ96IU4 210 aa14.05□□□□□ -0.16
SHMT2-225ENST00000556798 C6orf62Q9GZU0 229 aaPredicted RBP14.05□□□□□ -0.16
SHMT2-225ENST00000556798 C11orf54Q9H0W9 315 aaPredicted RBP14.05□□□□□ -0.16
SHMT2-225ENST00000556798 TRBV6-7A0A0A0MS04 114 aa14.04□□□□□ -0.16
SHMT2-225ENST00000556798 IGHV3-72A0A0B4J1Y9 119 aa14.04□□□□□ -0.16
SHMT2-225ENST00000556798 IGHV1-3A0A0C4DH29 117 aa14.04□□□□□ -0.16
SHMT2-225ENST00000556798 A6NDX4 124 aa14.04□□□□□ -0.16
SHMT2-225ENST00000556798 GAPDHP04406 335 aaKnown RBP14.04□□□□□ -0.16
SHMT2-225ENST00000556798 ZNF137PP52743 207 aa14.04□□□□□ -0.16
SHMT2-225ENST00000556798 DHRS7BQ6IAN0 325 aaPredicted RBP14.04□□□□□ -0.16
SHMT2-225ENST00000556798 MOB3BQ86TA1 216 aa14.04□□□□□ -0.16
SHMT2-225ENST00000556798 TGIF2LXQ8IUE1 241 aa14.04□□□□□ -0.16
SHMT2-225ENST00000556798 OR8H3Q8N146 312 aa14.04□□□□□ -0.16
SHMT2-225ENST00000556798 BEST4Q8NFU0 473 aa14.04□□□□□ -0.16
SHMT2-225ENST00000556798 CAPSLQ8WWF8 208 aa14.04□□□□□ -0.16
SHMT2-225ENST00000556798 CFHR4Q92496 578 aa14.04□□□□□ -0.16
SHMT2-225ENST00000556798 RBMXL1Q96E39 390 aaKnown RBP14.04□□□□□ -0.16
SHMT2-225ENST00000556798 GINS4Q9BRT9 223 aa14.04□□□□□ -0.16
SHMT2-225ENST00000556798 IFT46Q9NQC8 304 aa14.04□□□□□ -0.16
SHMT2-225ENST00000556798 ANXA10Q9UJ72 324 aa14.04□□□□□ -0.16
SHMT2-225ENST00000556798 DPPA5A6NC42 116 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms