RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 FAM74A7A6NL05 159 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 S100GP29377 79 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 IL2RGP31785 369 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 CD200P41217 278 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 DYNLT3P51808 116 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 RPL30P62888 115 aaKnown RBP8.47□□□□□ -1.05
TMEM260-211ENST00000556648 TMEM267Q0VDI3 215 aaPredicted RBP8.47□□□□□ -1.05
TMEM260-211ENST00000556648 LTC4SQ16873 150 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 FAM74A3Q4VXF1 159 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 FAM201AQ5SY85 155 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 BTNL3Q6UXE8 466 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 IL34Q6ZMJ4 242 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 DOLPP1Q86YN1 238 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 SPACA3Q8IXA5 215 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 RNASE11Q8TAA1 199 aaKnown RBP8.47□□□□□ -1.05
TMEM260-211ENST00000556648 RFESDQ8TAC1 157 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 ITLN1Q8WWA0 313 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 MEGF10Q96KG7 1140 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 OR2V2Q96R30 315 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 COL25A1Q9BXS0 654 aaPredicted RBP8.47□□□□□ -1.05
TMEM260-211ENST00000556648 Q9UFV3 132 aa8.47□□□□□ -1.05
TMEM260-211ENST00000556648 DEFB108AA8MXU0 73 aa8.46□□□□□ -1.05
TMEM260-211ENST00000556648 SRRM5B3KS81 715 aa8.46□□□□□ -1.05
TMEM260-211ENST00000556648 DNASE2O00115 360 aaPredicted RBP8.46□□□□□ -1.05
TMEM260-211ENST00000556648 RAMP3O60896 148 aa8.46□□□□□ -1.05
TMEM260-211ENST00000556648 ZNF737O75373 536 aa8.46□□□□□ -1.05
TMEM260-211ENST00000556648 WNT2P09544 360 aa8.46□□□□□ -1.05
TMEM260-211ENST00000556648 IAPPP10997 89 aa8.46□□□□□ -1.05
TMEM260-211ENST00000556648 SELLP14151 372 aa8.46□□□□□ -1.05
TMEM260-211ENST00000556648 PVALBP20472 110 aaPredicted RBP8.46□□□□□ -1.05
TMEM260-211ENST00000556648 PRDX2P32119 198 aa8.46□□□□□ -1.05
TMEM260-211ENST00000556648 KLF3P57682 345 aaPredicted RBP8.46□□□□□ -1.05
TMEM260-211ENST00000556648 LINC00205P59089 165 aa8.46□□□□□ -1.05
TMEM260-211ENST00000556648 EIF4EBP1Q13541 118 aaPredicted RBP8.46□□□□□ -1.05
TMEM260-211ENST00000556648 TMEM182Q6ZP80 229 aaPredicted RBP8.46□□□□□ -1.05
TMEM260-211ENST00000556648 GCSAMQ8N6F7 178 aa8.46□□□□□ -1.05
TMEM260-211ENST00000556648 TMEM217Q8N7C4 229 aa8.46□□□□□ -1.05
TMEM260-211ENST00000556648 GALMQ96C23 342 aa8.46□□□□□ -1.05
TMEM260-211ENST00000556648 PLPPR2Q96GM1 343 aa8.46□□□□□ -1.05
TMEM260-211ENST00000556648 ABHD14BQ96IU4 210 aa8.46□□□□□ -1.05
TMEM260-211ENST00000556648 AKR1E2Q96JD6 320 aa8.46□□□□□ -1.05
TMEM260-211ENST00000556648 SCNM1Q9BWG6 230 aa8.46□□□□□ -1.05
TMEM260-211ENST00000556648 MRPL37Q9BZE1 423 aaKnown RBP8.46□□□□□ -1.05
TMEM260-211ENST00000556648 PLEKHF2Q9H8W4 249 aa8.46□□□□□ -1.05
TMEM260-211ENST00000556648 PARP11Q9NR21 331 aa8.46□□□□□ -1.05
TMEM260-211ENST00000556648 A0A1B0GV50 99 aa8.46□□□□□ -1.06
TMEM260-211ENST00000556648 LOC105371267A0A1B0GV96 52 aa8.46□□□□□ -1.06
TMEM260-211ENST00000556648 A8MXE2 369 aa8.46□□□□□ -1.06
TMEM260-211ENST00000556648 TSPAN4O14817 238 aa8.46□□□□□ -1.06
TMEM260-211ENST00000556648 ATG12O94817 140 aa8.46□□□□□ -1.06
TMEM260-211ENST00000556648 IGHV3-13P01766 116 aa8.46□□□□□ -1.06
TMEM260-211ENST00000556648 CRYAAP02489 173 aa8.46□□□□□ -1.06
TMEM260-211ENST00000556648 DANCRP0C864 163 aa8.46□□□□□ -1.06
TMEM260-211ENST00000556648 CD80P33681 288 aa8.46□□□□□ -1.06
TMEM260-211ENST00000556648 GLRXP35754 106 aa8.46□□□□□ -1.06
TMEM260-211ENST00000556648 ZNF273Q14593 569 aa8.46□□□□□ -1.06
TMEM260-211ENST00000556648 TBR1Q16650 682 aa8.46□□□□□ -1.06
TMEM260-211ENST00000556648 EIF2S3LQ2VIR3 472 aaKnown RBP8.46□□□□□ -1.06
TMEM260-211ENST00000556648 KRTCAP3Q53RY4 240 aa8.46□□□□□ -1.06
TMEM260-211ENST00000556648 DUX4L9Q6RFH8 374 aaPredicted RBP8.46□□□□□ -1.06
TMEM260-211ENST00000556648 PUSL1Q8N0Z8 303 aaKnown RBP8.46□□□□□ -1.06
TMEM260-211ENST00000556648 ZNF645Q8N7E2 425 aa8.46□□□□□ -1.06
TMEM260-211ENST00000556648 OR5C1Q8NGR4 320 aa8.46□□□□□ -1.06
TMEM260-211ENST00000556648 MUCL1Q96DR8 90 aa8.46□□□□□ -1.06
TMEM260-211ENST00000556648 ABHD14AQ9BUJ0 271 aa8.46□□□□□ -1.06
TMEM260-211ENST00000556648 BSNQ9UPA5 3926 aa8.46□□□□□ -1.06
TMEM260-211ENST00000556648 A0A1B0GU03 582 aa8.45□□□□□ -1.06
TMEM260-211ENST00000556648 C15orf65H3BRN8 121 aa8.45□□□□□ -1.06
TMEM260-211ENST00000556648 WRBO00258 174 aa8.45□□□□□ -1.06
TMEM260-211ENST00000556648 ST8SIA5O15466 376 aa8.45□□□□□ -1.06
TMEM260-211ENST00000556648 SEC11BP0C7V7 166 aa8.45□□□□□ -1.06
TMEM260-211ENST00000556648 BRWD1-AS2P59051 145 aa8.45□□□□□ -1.06
TMEM260-211ENST00000556648 BLOC1S1P78537 153 aa8.45□□□□□ -1.06
TMEM260-211ENST00000556648 RUNX1Q01196 453 aa8.45□□□□□ -1.06
TMEM260-211ENST00000556648 ZNF616Q08AN1 781 aa8.45□□□□□ -1.06
TMEM260-211ENST00000556648 MIDNQ504T8 468 aa8.45□□□□□ -1.06
TMEM260-211ENST00000556648 UTF1Q5T230 341 aa8.45□□□□□ -1.06
TMEM260-211ENST00000556648 TGIF2LYQ8IUE0 185 aa8.45□□□□□ -1.06
TMEM260-211ENST00000556648 NKX6-2Q9C056 277 aaPredicted RBP8.45□□□□□ -1.06
TMEM260-211ENST00000556648 FAM212BQ9NTI7 297 aaPredicted RBP8.45□□□□□ -1.06
TMEM260-211ENST00000556648 LIN7CQ9NUP9 197 aaKnown RBP8.45□□□□□ -1.06
TMEM260-211ENST00000556648 UQCC1Q9NVA1 299 aa8.45□□□□□ -1.06
TMEM260-211ENST00000556648 CACFD1Q9UGQ2 172 aa8.45□□□□□ -1.06
TMEM260-211ENST00000556648 RAI1Q7Z5J4 1906 aaPredicted RBP8.45□□□□□ -1.06
TMEM260-211ENST00000556648 CADP27708 2225 aa8.45□□□□□ -1.06
TMEM260-211ENST00000556648 IGLV3-9A0A075B6K5 115 aa8.44□□□□□ -1.06
TMEM260-211ENST00000556648 F8W036 122 aa8.44□□□□□ -1.06
TMEM260-211ENST00000556648 IFNL4K9M1U5 179 aa8.44□□□□□ -1.06
TMEM260-211ENST00000556648 ATP6V0CP27449 155 aa8.44□□□□□ -1.06
TMEM260-211ENST00000556648 CAMLGP49069 296 aa8.44□□□□□ -1.06
TMEM260-211ENST00000556648 ZNF816Q0VGE8 651 aaPredicted RBP8.44□□□□□ -1.06
TMEM260-211ENST00000556648 SWI5Q1ZZU3 235 aa8.44□□□□□ -1.06
TMEM260-211ENST00000556648 ZNRF1Q8ND25 227 aa8.44□□□□□ -1.06
TMEM260-211ENST00000556648 LSM10Q969L4 123 aaKnown RBP8.44□□□□□ -1.06
TMEM260-211ENST00000556648 TSNAXQ99598 290 aaKnown RBP8.44□□□□□ -1.06
TMEM260-211ENST00000556648 SLC25A31Q9H0C2 315 aa8.44□□□□□ -1.06
TMEM260-211ENST00000556648 C19orf12Q9NSK7 152 aa8.44□□□□□ -1.06
TMEM260-211ENST00000556648 C17orf98A8MV24 154 aa8.44□□□□□ -1.06
TMEM260-211ENST00000556648 NUDT19A8MXV4 375 aa8.44□□□□□ -1.06
TMEM260-211ENST00000556648 FAM157AC9JC47 383 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms