RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 MAPK14Q16539 360 aa1.07□□□□□ -2.24
SCFD1-218ENST00000556256 C4orf26Q17RF5 130 aa1.07□□□□□ -2.24
SCFD1-218ENST00000556256 TMEM176BQ3YBM2 270 aaPredicted RBP1.07□□□□□ -2.24
SCFD1-218ENST00000556256 KRTAP5-10Q6L8G5 202 aa1.07□□□□□ -2.24
SCFD1-218ENST00000556256 SLC13A5Q86YT5 568 aaPredicted RBP1.07□□□□□ -2.24
SCFD1-218ENST00000556256 CRLF3Q8IUI8 442 aa1.07□□□□□ -2.24
SCFD1-218ENST00000556256 BLIDQ8IZY5 108 aa1.07□□□□□ -2.24
SCFD1-218ENST00000556256 OR5L1Q8NGL2 311 aa1.07□□□□□ -2.24
SCFD1-218ENST00000556256 OR4K13Q8NH42 304 aa1.07□□□□□ -2.24
SCFD1-218ENST00000556256 OR51H1Q8NH63 302 aa1.07□□□□□ -2.24
SCFD1-218ENST00000556256 STOML3Q8TAV4 291 aa1.07□□□□□ -2.24
SCFD1-218ENST00000556256 CCDC12Q8WUD4 166 aaPredicted RBP1.07□□□□□ -2.24
SCFD1-218ENST00000556256 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.07□□□□□ -2.24
SCFD1-218ENST00000556256 LRRC45Q96CN5 670 aa1.07□□□□□ -2.24
SCFD1-218ENST00000556256 CAPZA3Q96KX2 299 aa1.07□□□□□ -2.24
SCFD1-218ENST00000556256 CFAP53Q96M91 514 aa1.07□□□□□ -2.24
SCFD1-218ENST00000556256 TBX5Q99593 518 aa1.07□□□□□ -2.24
SCFD1-218ENST00000556256 ZNF251Q9BRH9 671 aa1.07□□□□□ -2.24
SCFD1-218ENST00000556256 CXCL16Q9H2A7 254 aa1.07□□□□□ -2.24
SCFD1-218ENST00000556256 LRRC19Q9H756 370 aa1.07□□□□□ -2.24
SCFD1-218ENST00000556256 SPACA1Q9HBV2 294 aa1.07□□□□□ -2.24
SCFD1-218ENST00000556256 TMEM106BQ9NUM4 274 aa1.07□□□□□ -2.24
SCFD1-218ENST00000556256 TAS2R9Q9NYW1 312 aa1.07□□□□□ -2.24
SCFD1-218ENST00000556256 FIS1Q9Y3D6 152 aa1.07□□□□□ -2.24
SCFD1-218ENST00000556256 PLCH2O75038 1416 aa1.06□□□□□ -2.24
SCFD1-218ENST00000556256 MUC21A0A0G2JKD1 596 aa1.06□□□□□ -2.24
SCFD1-218ENST00000556256 MUC21A0A140T8X8 626 aa1.06□□□□□ -2.24
SCFD1-218ENST00000556256 C19orf71A6NCJ1 209 aa1.06□□□□□ -2.24
SCFD1-218ENST00000556256 TRPC5OSA6NMA1 111 aa1.06□□□□□ -2.24
SCFD1-218ENST00000556256 LY6LH3BQJ8 138 aa1.06□□□□□ -2.24
SCFD1-218ENST00000556256 J3QKU1 62 aa1.06□□□□□ -2.24
SCFD1-218ENST00000556256 LY6HO94772 140 aa1.06□□□□□ -2.24
SCFD1-218ENST00000556256 S1PR2O95136 353 aa1.06□□□□□ -2.24
SCFD1-218ENST00000556256 OR4A8P0C604 315 aa1.06□□□□□ -2.24
SCFD1-218ENST00000556256 RD3LP0DJH9 198 aa1.06□□□□□ -2.24
SCFD1-218ENST00000556256 CPMP14384 443 aa1.06□□□□□ -2.24
SCFD1-218ENST00000556256 NQO1P15559 274 aaKnown RBP1.06□□□□□ -2.24
SCFD1-218ENST00000556256 AGTR1P30556 359 aa1.06□□□□□ -2.24
SCFD1-218ENST00000556256 SULT1A2P50226 295 aa1.06□□□□□ -2.24
SCFD1-218ENST00000556256 TSPEAR-AS2P59090 65 aa1.06□□□□□ -2.24
SCFD1-218ENST00000556256 C1DQ13901 141 aaKnown RBP1.06□□□□□ -2.24
SCFD1-218ENST00000556256 CLEC12BQ2HXU8 276 aa1.06□□□□□ -2.24
SCFD1-218ENST00000556256 ACSBG2Q5FVE4 666 aa1.06□□□□□ -2.24
SCFD1-218ENST00000556256 SPATA31B1PQ5VZV4 182 aa1.06□□□□□ -2.24
SCFD1-218ENST00000556256 SPATA24Q86W54 205 aa1.06□□□□□ -2.24
SCFD1-218ENST00000556256 PLCZ1Q86YW0 608 aa1.06□□□□□ -2.24
SCFD1-218ENST00000556256 LFNGQ8NES3 379 aa1.06□□□□□ -2.24
SCFD1-218ENST00000556256 OR7G1Q8NGA0 311 aa1.06□□□□□ -2.24
SCFD1-218ENST00000556256 ACY3Q96HD9 319 aa1.06□□□□□ -2.24
SCFD1-218ENST00000556256 ATP6V1G3Q96LB4 118 aa1.06□□□□□ -2.24
SCFD1-218ENST00000556256 GPR22Q99680 433 aa1.06□□□□□ -2.24
SCFD1-218ENST00000556256 CDCA4Q9BXL8 241 aa1.06□□□□□ -2.24
SCFD1-218ENST00000556256 OR51B6Q9H340 312 aa1.06□□□□□ -2.24
SCFD1-218ENST00000556256 CD300AQ9UGN4 299 aa1.06□□□□□ -2.24
SCFD1-218ENST00000556256 SAMHD1Q9Y3Z3 626 aaKnown RBP1.06□□□□□ -2.24
SCFD1-218ENST00000556256 GMEB1Q9Y692 573 aa1.06□□□□□ -2.24
SCFD1-218ENST00000556256 MINOS1-NBL1R4GNA1 71 aa1.06□□□□□ -2.24
SCFD1-218ENST00000556256 MYO5BQ9ULV0 1848 aa1.05□□□□□ -2.24
SCFD1-218ENST00000556256 LCTP09848 1927 aa1.05□□□□□ -2.24
SCFD1-218ENST00000556256 DOCK6Q96HP0 2047 aa1.05□□□□□ -2.24
SCFD1-218ENST00000556256 A0A0J9YX75 114 aa1.05□□□□□ -2.24
SCFD1-218ENST00000556256 DHRS12A0PJE2 317 aa1.05□□□□□ -2.24
SCFD1-218ENST00000556256 ERICH2A1L162 156 aa1.05□□□□□ -2.24
SCFD1-218ENST00000556256 SOD1P00441 154 aa1.05□□□□□ -2.24
SCFD1-218ENST00000556256 ORM1P02763 201 aa1.05□□□□□ -2.24
SCFD1-218ENST00000556256 OR13C7P0DN81 318 aa1.05□□□□□ -2.24
SCFD1-218ENST00000556256 ORM2P19652 201 aa1.05□□□□□ -2.24
SCFD1-218ENST00000556256 PVALBP20472 110 aaPredicted RBP1.05□□□□□ -2.24
SCFD1-218ENST00000556256 PSMB6P28072 239 aa1.05□□□□□ -2.24
SCFD1-218ENST00000556256 HSPA9P38646 679 aaKnown RBP1.05□□□□□ -2.24
SCFD1-218ENST00000556256 LPAR6P43657 344 aa1.05□□□□□ -2.24
SCFD1-218ENST00000556256 DAPP51397 102 aa1.05□□□□□ -2.24
SCFD1-218ENST00000556256 RWDD2BP57060 319 aa1.05□□□□□ -2.24
SCFD1-218ENST00000556256 SLC35A2P78381 396 aa1.05□□□□□ -2.24
SCFD1-218ENST00000556256 MESTQ5EB52 335 aa1.05□□□□□ -2.24
SCFD1-218ENST00000556256 OR11H1Q8NG94 326 aa1.05□□□□□ -2.24
SCFD1-218ENST00000556256 ERMNQ8TAM6 284 aa1.05□□□□□ -2.24
SCFD1-218ENST00000556256 SMIM12Q96EX1 92 aa1.05□□□□□ -2.24
SCFD1-218ENST00000556256 DNAJC30Q96LL9 226 aa1.05□□□□□ -2.24
SCFD1-218ENST00000556256 MED18Q9BUE0 208 aa1.05□□□□□ -2.24
SCFD1-218ENST00000556256 ZNF426Q9BUY5 554 aa1.05□□□□□ -2.24
SCFD1-218ENST00000556256 ZNF471Q9BX82 626 aaPredicted RBP1.05□□□□□ -2.24
SCFD1-218ENST00000556256 TTTY12Q9BZ98 90 aa1.05□□□□□ -2.24
SCFD1-218ENST00000556256 MED28Q9H204 178 aa1.05□□□□□ -2.24
SCFD1-218ENST00000556256 CHMP4BQ9H444 224 aaKnown RBP1.05□□□□□ -2.24
SCFD1-218ENST00000556256 WDR54Q9H977 334 aa1.05□□□□□ -2.24
SCFD1-218ENST00000556256 TP53TG1Q9Y2A0 90 aa1.05□□□□□ -2.24
SCFD1-218ENST00000556256 SNX10Q9Y5X0 201 aa1.05□□□□□ -2.24
SCFD1-218ENST00000556256 COL5A3P25940 1745 aaPredicted RBP1.05□□□□□ -2.24
SCFD1-218ENST00000556256 RAD50Q92878 1312 aa1.05□□□□□ -2.24
SCFD1-218ENST00000556256 NPATQ14207 1427 aa1.05□□□□□ -2.24
SCFD1-218ENST00000556256 ADAMTS7Q9UKP4 1686 aa1.04□□□□□ -2.24
SCFD1-218ENST00000556256 COL4A2P08572 1712 aa1.04□□□□□ -2.24
SCFD1-218ENST00000556256 IGHV3-73A0A0B4J1V6 119 aa1.04□□□□□ -2.24
SCFD1-218ENST00000556256 LINC00854A0A1B0GVQ3 168 aa1.04□□□□□ -2.24
SCFD1-218ENST00000556256 LINC00862A6NCI5 91 aa1.04□□□□□ -2.24
SCFD1-218ENST00000556256 FTCDNL1E5RQL4 147 aa1.04□□□□□ -2.24
SCFD1-218ENST00000556256 ARL6IP5O75915 188 aa1.04□□□□□ -2.24
SCFD1-218ENST00000556256 P0DMU3 169 aa1.04□□□□□ -2.24
SCFD1-218ENST00000556256 FAM231AP0DMU4 169 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms