RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 GPN1Q9HCN4 374 aaPredicted RBP8.41□□□□□ -1.06
NEK9-205ENST00000555405 NBPF19A0A087WUL8 3843 aa8.41□□□□□ -1.06
NEK9-205ENST00000555405 KLRD1Q13241 179 aa8.41□□□□□ -1.06
NEK9-205ENST00000555405 FCN2Q15485 313 aa8.41□□□□□ -1.06
NEK9-205ENST00000555405 LRRC37A5PQ49AS3 106 aa8.41□□□□□ -1.06
NEK9-205ENST00000555405 ZNF818PQ6ZRF7 136 aa8.41□□□□□ -1.06
NEK9-205ENST00000555405 METTL8Q9H825 291 aaKnown RBP8.41□□□□□ -1.06
NEK9-205ENST00000555405 MBNL3Q9NUK0 354 aaKnown RBP8.41□□□□□ -1.06
NEK9-205ENST00000555405 GSKIPQ9P0R6 139 aa8.41□□□□□ -1.06
NEK9-205ENST00000555405 ZNF221Q9UK13 617 aa8.41□□□□□ -1.06
NEK9-205ENST00000555405 C5orf51A6NDU8 294 aa8.4□□□□□ -1.06
NEK9-205ENST00000555405 CCNKO75909 580 aa8.4□□□□□ -1.06
NEK9-205ENST00000555405 NXPH3O95157 252 aa8.4□□□□□ -1.06
NEK9-205ENST00000555405 GPR12P47775 334 aa8.4□□□□□ -1.06
NEK9-205ENST00000555405 TAGLNQ01995 201 aaKnown RBP8.4□□□□□ -1.06
NEK9-205ENST00000555405 C17orf58Q2M2W7 97 aa8.4□□□□□ -1.06
NEK9-205ENST00000555405 RPL39P5Q59GN2 51 aa8.4□□□□□ -1.06
NEK9-205ENST00000555405 SGPP2Q8IWX5 399 aa8.4□□□□□ -1.06
NEK9-205ENST00000555405 CMTM1Q8IZ96 169 aa8.4□□□□□ -1.06
NEK9-205ENST00000555405 OR10X1Q8NGY0 326 aa8.4□□□□□ -1.06
NEK9-205ENST00000555405 LURAP1Q96LR2 239 aa8.4□□□□□ -1.06
NEK9-205ENST00000555405 SCGB3A2Q96PL1 93 aa8.4□□□□□ -1.06
NEK9-205ENST00000555405 PDCD10Q9BUL8 212 aa8.4□□□□□ -1.06
NEK9-205ENST00000555405 GAL3ST2Q9H3Q3 398 aa8.4□□□□□ -1.06
NEK9-205ENST00000555405 RPUSD1Q9UJJ7 312 aaKnown RBP8.4□□□□□ -1.06
NEK9-205ENST00000555405 TRBV6-7A0A0A0MS04 114 aa8.4□□□□□ -1.07
NEK9-205ENST00000555405 IGHV3-72A0A0B4J1Y9 119 aa8.4□□□□□ -1.07
NEK9-205ENST00000555405 M0R1X1 148 aa8.4□□□□□ -1.07
NEK9-205ENST00000555405 CREBL2O60519 120 aaPredicted RBP8.4□□□□□ -1.07
NEK9-205ENST00000555405 HMGN3Q15651 99 aa8.4□□□□□ -1.07
NEK9-205ENST00000555405 ZFAND1Q8TCF1 268 aa8.4□□□□□ -1.07
NEK9-205ENST00000555405 IDI2-AS1Q9NZ38 188 aa8.4□□□□□ -1.07
NEK9-205ENST00000555405 MGAT4CQ9UBM8 478 aa8.4□□□□□ -1.07
NEK9-205ENST00000555405 MGAT4AQ9UM21 535 aa8.4□□□□□ -1.07
NEK9-205ENST00000555405 GPR132Q9UNW8 380 aa8.4□□□□□ -1.07
NEK9-205ENST00000555405 SMLR1H3BR10 107 aa8.39□□□□□ -1.07
NEK9-205ENST00000555405 TOR1AO14656 332 aa8.39□□□□□ -1.07
NEK9-205ENST00000555405 FPR2P25090 351 aa8.39□□□□□ -1.07
NEK9-205ENST00000555405 DHRS2Q13268 280 aa8.39□□□□□ -1.07
NEK9-205ENST00000555405 Q5PR19 223 aa8.39□□□□□ -1.07
NEK9-205ENST00000555405 SHEQ5VZ18 495 aa8.39□□□□□ -1.07
NEK9-205ENST00000555405 PNKDQ8N490 385 aa8.39□□□□□ -1.07
NEK9-205ENST00000555405 TCTEX1D2Q8WW35 142 aa8.39□□□□□ -1.07
NEK9-205ENST00000555405 SLC2A9Q9NRM0 540 aa8.39□□□□□ -1.07
NEK9-205ENST00000555405 KCNIP3Q9Y2W7 256 aa8.39□□□□□ -1.07
NEK9-205ENST00000555405 TEX15Q9BXT5 2789 aa8.39□□□□□ -1.07
NEK9-205ENST00000555405 FAM157AC9JC47 383 aa8.39□□□□□ -1.07
NEK9-205ENST00000555405 C15orf65H3BRN8 121 aa8.39□□□□□ -1.07
NEK9-205ENST00000555405 GOSR2O14653 212 aa8.39□□□□□ -1.07
NEK9-205ENST00000555405 EPHA1P21709 976 aa8.39□□□□□ -1.07
NEK9-205ENST00000555405 CD34P28906 385 aa8.39□□□□□ -1.07
NEK9-205ENST00000555405 S100GP29377 79 aa8.39□□□□□ -1.07
NEK9-205ENST00000555405 ZNF134P52741 427 aa8.39□□□□□ -1.07
NEK9-205ENST00000555405 ZNF816Q0VGE8 651 aaPredicted RBP8.39□□□□□ -1.07
NEK9-205ENST00000555405 SSX9Q7RTT3 188 aa8.39□□□□□ -1.07
NEK9-205ENST00000555405 TCF23Q7RTU1 214 aa8.39□□□□□ -1.07
NEK9-205ENST00000555405 RTBDNQ9BSG5 229 aaPredicted RBP8.39□□□□□ -1.07
NEK9-205ENST00000555405 FXYD6Q9H0Q3 95 aa8.39□□□□□ -1.07
NEK9-205ENST00000555405 BARX1Q9HBU1 254 aaPredicted RBP8.39□□□□□ -1.07
NEK9-205ENST00000555405 LINC00312Q9Y6C7 94 aa8.39□□□□□ -1.07
NEK9-205ENST00000555405 VPS13CQ709C8 3753 aa8.39□□□□□ -1.07
NEK9-205ENST00000555405 PLXNB1O43157 2135 aa8.39□□□□□ -1.07
NEK9-205ENST00000555405 SLC22A5O76082 557 aa8.39□□□□□ -1.07
NEK9-205ENST00000555405 HNRNPCP07910 306 aaKnown RBP eCLIP8.39□□□□□ -1.07
NEK9-205ENST00000555405 OR5AC1P0C628 307 aa8.39□□□□□ -1.07
NEK9-205ENST00000555405 MORN2Q502X0 79 aa8.39□□□□□ -1.07
NEK9-205ENST00000555405 DHRS11Q6UWP2 260 aa8.39□□□□□ -1.07
NEK9-205ENST00000555405 ZNF841Q6ZN19 808 aa8.39□□□□□ -1.07
NEK9-205ENST00000555405 TBC1D26Q86UD7 250 aa8.39□□□□□ -1.07
NEK9-205ENST00000555405 H1FOOQ8IZA3 346 aaPredicted RBP8.39□□□□□ -1.07
NEK9-205ENST00000555405 ABHD12Q8N2K0 398 aa8.39□□□□□ -1.07
NEK9-205ENST00000555405 C12orf45Q8N5I9 185 aaPredicted RBP8.39□□□□□ -1.07
NEK9-205ENST00000555405 C22orf15Q8WYQ4 148 aa8.39□□□□□ -1.07
NEK9-205ENST00000555405 Q96MF0 132 aa8.39□□□□□ -1.07
NEK9-205ENST00000555405 ZNF107Q9UII5 783 aaPredicted RBP8.39□□□□□ -1.07
NEK9-205ENST00000555405 CELSR1Q9NYQ6 3014 aa8.38□□□□□ -1.07
NEK9-205ENST00000555405 ZNF729A6NN14 1252 aaPredicted RBP8.38□□□□□ -1.07
NEK9-205ENST00000555405 ENSAO43768 121 aaKnown RBP8.38□□□□□ -1.07
NEK9-205ENST00000555405 RBMXL2O75526 392 aaKnown RBP8.38□□□□□ -1.07
NEK9-205ENST00000555405 ADAP1O75689 374 aa8.38□□□□□ -1.07
NEK9-205ENST00000555405 LIPFP07098 398 aa8.38□□□□□ -1.07
NEK9-205ENST00000555405 IZUMO4Q1ZYL8 232 aa8.38□□□□□ -1.07
NEK9-205ENST00000555405 DEFB113Q30KQ7 82 aa8.38□□□□□ -1.07
NEK9-205ENST00000555405 CLEC18BQ6UXF7 455 aa8.38□□□□□ -1.07
NEK9-205ENST00000555405 LDLRAD3Q86YD5 345 aa8.38□□□□□ -1.07
NEK9-205ENST00000555405 C10orf105Q8TEF2 133 aa8.38□□□□□ -1.07
NEK9-205ENST00000555405 MOB3AQ96BX8 217 aa8.38□□□□□ -1.07
NEK9-205ENST00000555405 RAB39BQ96DA2 213 aa8.38□□□□□ -1.07
NEK9-205ENST00000555405 ANAPC10Q9UM13 185 aa8.38□□□□□ -1.07
NEK9-205ENST00000555405 HILPDAQ9Y5L2 63 aa8.38□□□□□ -1.07
NEK9-205ENST00000555405 JMJD1CQ15652 2540 aa8.38□□□□□ -1.07
NEK9-205ENST00000555405 SETXQ7Z333 2677 aaKnown RBP8.38□□□□□ -1.07
NEK9-205ENST00000555405 GPR31O00270 319 aa8.38□□□□□ -1.07
NEK9-205ENST00000555405 RGS11O94810 467 aa8.38□□□□□ -1.07
NEK9-205ENST00000555405 TMEM155Q4W5P6 130 aa8.38□□□□□ -1.07
NEK9-205ENST00000555405 ZNF660Q6AZW8 331 aaPredicted RBP8.38□□□□□ -1.07
NEK9-205ENST00000555405 ZNF880Q6PDB4 577 aa8.38□□□□□ -1.07
NEK9-205ENST00000555405 KAAG1Q9UBP8 84 aa8.38□□□□□ -1.07
NEK9-205ENST00000555405 CLEC18AA5D8T8 446 aa8.38□□□□□ -1.07
NEK9-205ENST00000555405 H7C2Y5 167 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms