RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 PTAFRP25105 342 aa10.57□□□□□ -0.72
PPP4R3A-206ENST00000554943 FAM90A2PQ658T7 463 aa10.57□□□□□ -0.72
PPP4R3A-206ENST00000554943 TMEM242Q9NWH2 141 aa10.57□□□□□ -0.72
PPP4R3A-206ENST00000554943 OR14J1Q9UGF5 321 aa10.57□□□□□ -0.72
PPP4R3A-206ENST00000554943 RAI1Q7Z5J4 1906 aaPredicted RBP10.57□□□□□ -0.72
PPP4R3A-206ENST00000554943 CAMLGP49069 296 aa10.57□□□□□ -0.72
PPP4R3A-206ENST00000554943 C1orf174Q8IYL3 243 aa10.57□□□□□ -0.72
PPP4R3A-206ENST00000554943 TCTEX1D1Q8N7M0 179 aa10.57□□□□□ -0.72
PPP4R3A-206ENST00000554943 ZNF565Q8N9K5 539 aa10.57□□□□□ -0.72
PPP4R3A-206ENST00000554943 KLF14Q8TD94 323 aaPredicted RBP10.57□□□□□ -0.72
PPP4R3A-206ENST00000554943 RBMXL1Q96E39 390 aaKnown RBP10.57□□□□□ -0.72
PPP4R3A-206ENST00000554943 BIN3Q9NQY0 253 aa10.57□□□□□ -0.72
PPP4R3A-206ENST00000554943 METTL1Q9UBP6 276 aaKnown RBP10.57□□□□□ -0.72
PPP4R3A-206ENST00000554943 CGB3P0DN86 165 aa10.56□□□□□ -0.72
PPP4R3A-206ENST00000554943 CGB7P0DN87 165 aa10.56□□□□□ -0.72
PPP4R3A-206ENST00000554943 WT1P19544 449 aaPredicted RBP10.56□□□□□ -0.72
PPP4R3A-206ENST00000554943 OR3A1P47881 315 aa10.56□□□□□ -0.72
PPP4R3A-206ENST00000554943 ACP7Q6ZNF0 438 aa10.56□□□□□ -0.72
PPP4R3A-206ENST00000554943 SLC25A40Q8TBP6 338 aa10.56□□□□□ -0.72
PPP4R3A-206ENST00000554943 DIRC2Q96SL1 478 aa10.56□□□□□ -0.72
PPP4R3A-206ENST00000554943 CISD1Q9NZ45 108 aaKnown RBP10.56□□□□□ -0.72
PPP4R3A-206ENST00000554943 ROS1P08922 2347 aa10.56□□□□□ -0.72
PPP4R3A-206ENST00000554943 CXorf65A6NEN9 183 aa10.56□□□□□ -0.72
PPP4R3A-206ENST00000554943 ZNF98A6NK75 572 aa10.56□□□□□ -0.72
PPP4R3A-206ENST00000554943 HS3ST1O14792 307 aa10.56□□□□□ -0.72
PPP4R3A-206ENST00000554943 EIF3GO75821 320 aaKnown RBP eCLIP10.56□□□□□ -0.72
PPP4R3A-206ENST00000554943 PLGLB1Q02325 96 aa10.56□□□□□ -0.72
PPP4R3A-206ENST00000554943 TMEM249Q2WGJ8 235 aa10.56□□□□□ -0.72
PPP4R3A-206ENST00000554943 KHDC3LQ587J8 217 aa10.56□□□□□ -0.72
PPP4R3A-206ENST00000554943 DHRS13Q6UX07 377 aa10.56□□□□□ -0.72
PPP4R3A-206ENST00000554943 WDR82Q6UXN9 313 aa10.56□□□□□ -0.72
PPP4R3A-206ENST00000554943 TMEM178AQ8NBL3 297 aa10.56□□□□□ -0.72
PPP4R3A-206ENST00000554943 HSD17B11Q8NBQ5 300 aa10.56□□□□□ -0.72
PPP4R3A-206ENST00000554943 OR1J1Q8NGS3 322 aa10.56□□□□□ -0.72
PPP4R3A-206ENST00000554943 PBDC1Q9BVG4 233 aa10.56□□□□□ -0.72
PPP4R3A-206ENST00000554943 TANC2Q9HCD6 1990 aa10.56□□□□□ -0.72
PPP4R3A-206ENST00000554943 TPRP12270 2363 aaKnown RBP10.56□□□□□ -0.72
PPP4R3A-206ENST00000554943 LURAP1Q96LR2 239 aa10.56□□□□□ -0.72
PPP4R3A-206ENST00000554943 GAB2Q9UQC2 676 aa10.56□□□□□ -0.72
PPP4R3A-206ENST00000554943 PRSS46E5RG02 174 aa10.55□□□□□ -0.72
PPP4R3A-206ENST00000554943 PROP1O75360 226 aa10.55□□□□□ -0.72
PPP4R3A-206ENST00000554943 DFFBO76075 338 aa10.55□□□□□ -0.72
PPP4R3A-206ENST00000554943 LHBP01229 141 aa10.55□□□□□ -0.72
PPP4R3A-206ENST00000554943 CCNOP22674 350 aa10.55□□□□□ -0.72
PPP4R3A-206ENST00000554943 RND2P52198 227 aa10.55□□□□□ -0.72
PPP4R3A-206ENST00000554943 SFT2D1Q8WV19 159 aa10.55□□□□□ -0.72
PPP4R3A-206ENST00000554943 RDH5Q92781 318 aa10.55□□□□□ -0.72
PPP4R3A-206ENST00000554943 HIST1H2AAQ96QV6 131 aa10.55□□□□□ -0.72
PPP4R3A-206ENST00000554943 DEFB127Q9H1M4 99 aa10.55□□□□□ -0.72
PPP4R3A-206ENST00000554943 OBP2BQ9NPH6 170 aa10.55□□□□□ -0.72
PPP4R3A-206ENST00000554943 R4GN57 208 aa10.55□□□□□ -0.72
PPP4R3A-206ENST00000554943 BOD1L1Q8NFC6 3051 aa10.55□□□□□ -0.72
PPP4R3A-206ENST00000554943 TTC28Q96AY4 2481 aa10.55□□□□□ -0.72
PPP4R3A-206ENST00000554943 A0A1W2PPE3 182 aa10.55□□□□□ -0.72
PPP4R3A-206ENST00000554943 FAM90A9PA6NNJ1 464 aa10.55□□□□□ -0.72
PPP4R3A-206ENST00000554943 ZNF737O75373 536 aa10.55□□□□□ -0.72
PPP4R3A-206ENST00000554943 HAND1O96004 215 aa10.55□□□□□ -0.72
PPP4R3A-206ENST00000554943 HTD2P86397 168 aa10.55□□□□□ -0.72
PPP4R3A-206ENST00000554943 SLC35E3Q7Z769 313 aa10.55□□□□□ -0.72
PPP4R3A-206ENST00000554943 MAGT1Q9H0U3 335 aa10.55□□□□□ -0.72
PPP4R3A-206ENST00000554943 C12orf49Q9H741 205 aa10.55□□□□□ -0.72
PPP4R3A-206ENST00000554943 LIN7CQ9NUP9 197 aaKnown RBP10.55□□□□□ -0.72
PPP4R3A-206ENST00000554943 IGHV3-64DA0A0J9YX35 117 aa10.54□□□□□ -0.72
PPP4R3A-206ENST00000554943 C12orf77C9JDV5 145 aa10.54□□□□□ -0.72
PPP4R3A-206ENST00000554943 SYNGR2O43760 224 aa10.54□□□□□ -0.72
PPP4R3A-206ENST00000554943 RAB5AP20339 215 aa10.54□□□□□ -0.72
PPP4R3A-206ENST00000554943 PPT1P50897 306 aa10.54□□□□□ -0.72
PPP4R3A-206ENST00000554943 RPL30P62888 115 aaKnown RBP10.54□□□□□ -0.72
PPP4R3A-206ENST00000554943 SERF2P84101 59 aa10.54□□□□□ -0.72
PPP4R3A-206ENST00000554943 C9orf106Q8NAJ2 232 aa10.54□□□□□ -0.72
PPP4R3A-206ENST00000554943 CA5BP1Q8WTZ4 195 aa10.54□□□□□ -0.72
PPP4R3A-206ENST00000554943 WDR61Q9GZS3 305 aaKnown RBP10.54□□□□□ -0.72
PPP4R3A-206ENST00000554943 TMEM9BQ9NQ34 198 aa10.54□□□□□ -0.72
PPP4R3A-206ENST00000554943 MBD3L4A6NDZ8 208 aaPredicted RBP10.54□□□□□ -0.72
PPP4R3A-206ENST00000554943 MBD3L3A6NE82 208 aaPredicted RBP10.54□□□□□ -0.72
PPP4R3A-206ENST00000554943 MBD3L5A6NJ08 208 aaPredicted RBP10.54□□□□□ -0.72
PPP4R3A-206ENST00000554943 MSMPQ1L6U9 139 aa10.54□□□□□ -0.72
PPP4R3A-206ENST00000554943 IGFL3Q6UXB1 125 aa10.54□□□□□ -0.72
PPP4R3A-206ENST00000554943 MBD3L2Q8NHZ7 208 aaPredicted RBP10.54□□□□□ -0.72
PPP4R3A-206ENST00000554943 LINC00574Q9H8X3 128 aa10.54□□□□□ -0.72
PPP4R3A-206ENST00000554943 ZNF71Q9NQZ8 489 aaPredicted RBP10.54□□□□□ -0.72
PPP4R3A-206ENST00000554943 SH2D1BO14796 132 aa10.54□□□□□ -0.72
PPP4R3A-206ENST00000554943 GPR37O15354 613 aa10.54□□□□□ -0.72
PPP4R3A-206ENST00000554943 RUNX1Q01196 453 aa10.54□□□□□ -0.72
PPP4R3A-206ENST00000554943 HSPB6O14558 160 aa10.53□□□□□ -0.72
PPP4R3A-206ENST00000554943 FAM213BQ8TBF2 198 aa10.53□□□□□ -0.72
PPP4R3A-206ENST00000554943 FAM222BQ8WU58 562 aa10.53□□□□□ -0.72
PPP4R3A-206ENST00000554943 P2RX4Q99571 388 aa10.53□□□□□ -0.72
PPP4R3A-206ENST00000554943 VSIRQ9H7M9 311 aa10.53□□□□□ -0.72
PPP4R3A-206ENST00000554943 EP300Q09472 2414 aaPredicted RBP10.53□□□□□ -0.72
PPP4R3A-206ENST00000554943 OOEPA6NGQ2 149 aa10.53□□□□□ -0.72
PPP4R3A-206ENST00000554943 ELOBQ15370 118 aa10.53□□□□□ -0.72
PPP4R3A-206ENST00000554943 FGFRL1Q8N441 504 aa10.53□□□□□ -0.72
PPP4R3A-206ENST00000554943 CXXC4Q9H2H0 198 aa10.53□□□□□ -0.72
PPP4R3A-206ENST00000554943 TET2Q6N021 2002 aaPredicted RBP10.53□□□□□ -0.72
PPP4R3A-206ENST00000554943 ITGB1BP1O14713 200 aa10.52□□□□□ -0.72
PPP4R3A-206ENST00000554943 CDIPTO14735 213 aa10.52□□□□□ -0.72
PPP4R3A-206ENST00000554943 RAMP3O60896 148 aa10.52□□□□□ -0.72
PPP4R3A-206ENST00000554943 IGKV1D-33P01593 117 aa10.52□□□□□ -0.72
PPP4R3A-206ENST00000554943 IGKV1-33P01594 117 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms