RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 HIST1H2BJP06899 126 aa12.42□□□□□ -0.42
PPP4R3A-201ENST00000554308 HIST1H2BOP23527 126 aa12.42□□□□□ -0.42
PPP4R3A-201ENST00000554308 HIST1H2BBP33778 126 aa12.42□□□□□ -0.42
PPP4R3A-201ENST00000554308 HIST1H2BDP58876 126 aa12.42□□□□□ -0.42
PPP4R3A-201ENST00000554308 HIST1H2BCP62807 126 aa12.42□□□□□ -0.42
PPP4R3A-201ENST00000554308 GNG3P63215 75 aa12.42□□□□□ -0.42
PPP4R3A-201ENST00000554308 HIST2H2BEQ16778 126 aa12.42□□□□□ -0.42
PPP4R3A-201ENST00000554308 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.42□□□□□ -0.42
PPP4R3A-201ENST00000554308 MKXQ8IYA7 352 aa12.42□□□□□ -0.42
PPP4R3A-201ENST00000554308 CISD2Q8N5K1 135 aaKnown RBP12.42□□□□□ -0.42
PPP4R3A-201ENST00000554308 LFNGQ8NES3 379 aa12.42□□□□□ -0.42
PPP4R3A-201ENST00000554308 OR5C1Q8NGR4 320 aa12.42□□□□□ -0.42
PPP4R3A-201ENST00000554308 HIST1H2BHQ93079 126 aa12.42□□□□□ -0.42
PPP4R3A-201ENST00000554308 HIST1H2BNQ99877 126 aa12.42□□□□□ -0.42
PPP4R3A-201ENST00000554308 HIST1H2BMQ99879 126 aa12.42□□□□□ -0.42
PPP4R3A-201ENST00000554308 MBD3L4A6NDZ8 208 aaPredicted RBP12.42□□□□□ -0.42
PPP4R3A-201ENST00000554308 MBD3L3A6NE82 208 aaPredicted RBP12.42□□□□□ -0.42
PPP4R3A-201ENST00000554308 MBD3L5A6NJ08 208 aaPredicted RBP12.42□□□□□ -0.42
PPP4R3A-201ENST00000554308 CGAP01215 116 aa12.42□□□□□ -0.42
PPP4R3A-201ENST00000554308 SOD3P08294 240 aa12.42□□□□□ -0.42
PPP4R3A-201ENST00000554308 GPX4P36969 197 aaPredicted RBP12.42□□□□□ -0.42
PPP4R3A-201ENST00000554308 DYNLT3P51808 116 aa12.42□□□□□ -0.42
PPP4R3A-201ENST00000554308 PSG7Q13046 419 aa12.42□□□□□ -0.42
PPP4R3A-201ENST00000554308 FAM180AQ6UWF9 173 aa12.42□□□□□ -0.42
PPP4R3A-201ENST00000554308 ZNF429Q86V71 674 aa12.42□□□□□ -0.42
PPP4R3A-201ENST00000554308 MBD3L2Q8NHZ7 208 aaPredicted RBP12.42□□□□□ -0.42
PPP4R3A-201ENST00000554308 ESPL1Q14674 2120 aa12.42□□□□□ -0.42
PPP4R3A-201ENST00000554308 C3orf85A0A1B0GTC6 90 aa12.41□□□□□ -0.42
PPP4R3A-201ENST00000554308 GATCO43716 136 aaKnown RBP12.41□□□□□ -0.42
PPP4R3A-201ENST00000554308 IGKV3-15P01624 115 aa12.41□□□□□ -0.42
PPP4R3A-201ENST00000554308 FABP6P51161 128 aa12.41□□□□□ -0.42
PPP4R3A-201ENST00000554308 ZNF573Q86YE8 665 aa12.41□□□□□ -0.42
PPP4R3A-201ENST00000554308 KLF14Q8TD94 323 aaPredicted RBP12.41□□□□□ -0.42
PPP4R3A-201ENST00000554308 NEK7Q8TDX7 302 aa12.41□□□□□ -0.42
PPP4R3A-201ENST00000554308 GPR61Q9BZJ8 451 aa12.41□□□□□ -0.42
PPP4R3A-201ENST00000554308 GAR1Q9NY12 217 aaKnown RBP12.41□□□□□ -0.42
PPP4R3A-201ENST00000554308 WRBO00258 174 aa12.41□□□□□ -0.42
PPP4R3A-201ENST00000554308 HS3ST1O14792 307 aa12.41□□□□□ -0.42
PPP4R3A-201ENST00000554308 MPPED1O15442 326 aa12.41□□□□□ -0.42
PPP4R3A-201ENST00000554308 CYB5BO43169 146 aa12.41□□□□□ -0.42
PPP4R3A-201ENST00000554308 TRGC2P03986 189 aa12.41□□□□□ -0.42
PPP4R3A-201ENST00000554308 CECR9P0C854 216 aa12.41□□□□□ -0.42
PPP4R3A-201ENST00000554308 S100A2P29034 98 aa12.41□□□□□ -0.42
PPP4R3A-201ENST00000554308 MPV17P39210 176 aa12.41□□□□□ -0.42
PPP4R3A-201ENST00000554308 NKX2-1P43699 371 aaPredicted RBP12.41□□□□□ -0.42
PPP4R3A-201ENST00000554308 FGF12P61328 243 aa12.41□□□□□ -0.42
PPP4R3A-201ENST00000554308 HERV-K104P61576 105 aa12.41□□□□□ -0.42
PPP4R3A-201ENST00000554308 TMEM252Q8N6L7 170 aa12.41□□□□□ -0.42
PPP4R3A-201ENST00000554308 ZNF286AQ9HBT8 521 aa12.41□□□□□ -0.42
PPP4R3A-201ENST00000554308 TREM2Q9NZC2 230 aa12.41□□□□□ -0.42
PPP4R3A-201ENST00000554308 SH3BGRL2Q9UJC5 107 aa12.41□□□□□ -0.42
PPP4R3A-201ENST00000554308 TMED3Q9Y3Q3 217 aa12.41□□□□□ -0.42
PPP4R3A-201ENST00000554308 ZGRF1Q86YA3 2104 aa12.4□□□□□ -0.42
PPP4R3A-201ENST00000554308 HEATR1Q9H583 2144 aaKnown RBP12.4□□□□□ -0.42
PPP4R3A-201ENST00000554308 ADAM20O43506 726 aa12.4□□□□□ -0.42
PPP4R3A-201ENST00000554308 SCAF4O95104 1147 aaKnown RBP12.4□□□□□ -0.42
PPP4R3A-201ENST00000554308 PPYP01298 95 aa12.4□□□□□ -0.42
PPP4R3A-201ENST00000554308 SYT3Q9BQG1 590 aa12.4□□□□□ -0.42
PPP4R3A-201ENST00000554308 PRDM13Q9H4Q3 707 aa12.4□□□□□ -0.42
PPP4R3A-201ENST00000554308 ICE1Q9Y2F5 2266 aa12.4□□□□□ -0.42
PPP4R3A-201ENST00000554308 TRDCB7Z8K6 153 aa12.4□□□□□ -0.42
PPP4R3A-201ENST00000554308 PITX3O75364 302 aa12.4□□□□□ -0.42
PPP4R3A-201ENST00000554308 GRPP07492 148 aa12.4□□□□□ -0.42
PPP4R3A-201ENST00000554308 GNRHRP30968 328 aa12.4□□□□□ -0.42
PPP4R3A-201ENST00000554308 ZNF154Q13106 437 aa12.4□□□□□ -0.42
PPP4R3A-201ENST00000554308 UNQ6494/PRO21346Q6UXR6 183 aa12.4□□□□□ -0.42
PPP4R3A-201ENST00000554308 BEND4Q6ZU67 534 aa12.4□□□□□ -0.42
PPP4R3A-201ENST00000554308 BHLHA15Q7RTS1 189 aaPredicted RBP12.4□□□□□ -0.42
PPP4R3A-201ENST00000554308 TBC1D26Q86UD7 250 aa12.4□□□□□ -0.42
PPP4R3A-201ENST00000554308 WSB1Q9Y6I7 421 aa12.4□□□□□ -0.42
PPP4R3A-201ENST00000554308 NCOR2Q9Y618 2525 aa12.39□□□□□ -0.43
PPP4R3A-201ENST00000554308 CXorf65A6NEN9 183 aa12.39□□□□□ -0.43
PPP4R3A-201ENST00000554308 OR5B21A6NL26 309 aa12.39□□□□□ -0.43
PPP4R3A-201ENST00000554308 CDIPTO14735 213 aa12.39□□□□□ -0.43
PPP4R3A-201ENST00000554308 P2RY6Q15077 328 aa12.39□□□□□ -0.43
PPP4R3A-201ENST00000554308 SPIN3Q5JUX0 258 aa12.39□□□□□ -0.43
PPP4R3A-201ENST00000554308 ZNF474Q6S9Z5 364 aaPredicted RBP12.39□□□□□ -0.43
PPP4R3A-201ENST00000554308 RDH5Q92781 318 aa12.39□□□□□ -0.43
PPP4R3A-201ENST00000554308 TMEM222Q9H0R3 208 aa12.39□□□□□ -0.43
PPP4R3A-201ENST00000554308 OR51I2Q9H344 312 aa12.39□□□□□ -0.43
PPP4R3A-201ENST00000554308 OBP2BQ9NPH6 170 aa12.39□□□□□ -0.43
PPP4R3A-201ENST00000554308 KIAA1456Q9P272 454 aa12.39□□□□□ -0.43
PPP4R3A-201ENST00000554308 UBE2J1Q9Y385 318 aaPredicted RBP12.39□□□□□ -0.43
PPP4R3A-201ENST00000554308 TNFSF12O43508 249 aa12.39□□□□□ -0.43
PPP4R3A-201ENST00000554308 BMP5P22003 454 aa12.39□□□□□ -0.43
PPP4R3A-201ENST00000554308 ZNF266Q14584 549 aa12.39□□□□□ -0.43
PPP4R3A-201ENST00000554308 C4orf17Q53FE4 359 aa12.39□□□□□ -0.43
PPP4R3A-201ENST00000554308 KHDC3LQ587J8 217 aa12.39□□□□□ -0.43
PPP4R3A-201ENST00000554308 C1orf185Q5T7R7 199 aa12.39□□□□□ -0.43
PPP4R3A-201ENST00000554308 WDR86Q86TI4 376 aa12.39□□□□□ -0.43
PPP4R3A-201ENST00000554308 SAXO1Q8IYX7 474 aa12.39□□□□□ -0.43
PPP4R3A-201ENST00000554308 C1orf162Q8NEQ5 155 aaPredicted RBP12.39□□□□□ -0.43
PPP4R3A-201ENST00000554308 OR5H1A6NKK0 313 aa12.38□□□□□ -0.43
PPP4R3A-201ENST00000554308 RAC2P15153 192 aa12.38□□□□□ -0.43
PPP4R3A-201ENST00000554308 MDKP21741 143 aaPredicted RBP12.38□□□□□ -0.43
PPP4R3A-201ENST00000554308 HOXA4Q00056 320 aaPredicted RBP12.38□□□□□ -0.43
PPP4R3A-201ENST00000554308 TBR1Q16650 682 aa12.38□□□□□ -0.43
PPP4R3A-201ENST00000554308 KRTCAP3Q53RY4 240 aa12.38□□□□□ -0.43
PPP4R3A-201ENST00000554308 SP5Q6BEB4 398 aaPredicted RBP12.38□□□□□ -0.43
PPP4R3A-201ENST00000554308 ZNF695Q8IW36 515 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms