RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 LRRC29Q8WV35 223 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 DNAJA4Q8WW22 397 aaPredicted RBP2.78□□□□□ -1.96
ATXN3-217ENST00000553287 IL1F10Q8WWZ1 152 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 TESCQ96BS2 214 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 FMO2Q99518 471 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 PRSS27Q9BQR3 290 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 TMEM43Q9BTV4 400 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 ADAT1Q9BUB4 502 aaKnown RBP2.78□□□□□ -1.96
ATXN3-217ENST00000553287 WDR55Q9H6Y2 383 aaPredicted RBP2.78□□□□□ -1.96
ATXN3-217ENST00000553287 KAT8Q9H7Z6 458 aaKnown RBP2.78□□□□□ -1.96
ATXN3-217ENST00000553287 TPT1P8Q9HAU6 139 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 C12orf10Q9HB07 376 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 CACYBPQ9HB71 228 aaKnown RBP2.78□□□□□ -1.96
ATXN3-217ENST00000553287 POLE4Q9NR33 117 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 INIPQ9NRY2 104 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 C19orf12Q9NSK7 152 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 PAK1IP1Q9NWT1 392 aaPredicted RBP2.78□□□□□ -1.96
ATXN3-217ENST00000553287 PSMC3IPQ9P2W1 217 aaPredicted RBP2.78□□□□□ -1.96
ATXN3-217ENST00000553287 BTNL2Q9UIR0 455 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 NDUFAF1Q9Y375 327 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 CDH10Q9Y6N8 788 aa2.78□□□□□ -1.96
ATXN3-217ENST00000553287 TRAV27A0A087WT01 109 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 TRBV6-6A0A0A6YYG2 114 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 OR6C6A6NF89 314 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 C12orf71A8MTZ7 269 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 SEC14L6B5MCN3 397 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 F5H5K5 113 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 H3BQF6 201 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 ZSCAN12O43309 604 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 AKR7A2O43488 359 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 CHP2O43745 196 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 ENTPD5O75356 428 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 OR7A10O76100 309 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 CLIC3O95833 236 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 MT-ATP6P00846 226 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 LHBP01229 141 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 ARG1P05089 322 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 SLC2A1P11166 492 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 PIPP12273 146 aaPredicted RBP2.77□□□□□ -1.97
ATXN3-217ENST00000553287 CTLA4P16410 223 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 MSR1P21757 451 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 PRDX6P30041 224 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 RPS27P42677 84 aaKnown RBP2.77□□□□□ -1.97
ATXN3-217ENST00000553287 GABRA2P47869 451 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 RGS6P49758 472 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 APOC4P55056 127 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 PCBD1P61457 104 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 ZNF92Q03936 586 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 RGNQ15493 299 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 DUSP7Q16829 419 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 DHRS4L2Q6PKH6 230 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 C5orf46Q6UWT4 87 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 OR2W3Q7Z3T1 314 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 FAM220AQ7Z4H9 259 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 MSRB3Q8IXL7 192 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 H1FOOQ8IZA3 346 aaPredicted RBP2.77□□□□□ -1.97
ATXN3-217ENST00000553287 TRIML2Q8N7C3 387 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 OR9Q1Q8NGQ5 310 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 OR51A7Q8NH64 312 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 SPRYD4Q8WW59 207 aaPredicted RBP2.77□□□□□ -1.97
ATXN3-217ENST00000553287 ACOT11Q8WXI4 607 aaPredicted RBP2.77□□□□□ -1.97
ATXN3-217ENST00000553287 ISOC1Q96CN7 298 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 RASD2Q96D21 266 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 ITCHQ96J02 903 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 GAFA1Q96PS6 74 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 P2RX4Q99571 388 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 ARMC7Q9H6L4 198 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 RAB18Q9NP72 206 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 SLC25A37Q9NYZ2 338 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 CALML5Q9NZT1 146 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 RIMS3Q9UJD0 308 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 ZNF229Q9UJW7 825 aa2.77□□□□□ -1.97
ATXN3-217ENST00000553287 A0A1B0GWJ7 208 aa2.76□□□□□ -1.97
ATXN3-217ENST00000553287 GGT3PA6NGU5 568 aa2.76□□□□□ -1.97
ATXN3-217ENST00000553287 CD300LBA8K4G0 201 aa2.76□□□□□ -1.97
ATXN3-217ENST00000553287 H3BSH0 61 aa2.76□□□□□ -1.97
ATXN3-217ENST00000553287 K7N7A8 449 aa2.76□□□□□ -1.97
ATXN3-217ENST00000553287 DCTN6O00399 190 aa2.76□□□□□ -1.97
ATXN3-217ENST00000553287 CDIPTO14735 213 aa2.76□□□□□ -1.97
ATXN3-217ENST00000553287 SLC16A7O60669 478 aa2.76□□□□□ -1.97
ATXN3-217ENST00000553287 RAMP3O60896 148 aa2.76□□□□□ -1.97
ATXN3-217ENST00000553287 FSTL3O95633 263 aa2.76□□□□□ -1.97
ATXN3-217ENST00000553287 ACSM4P0C7M7 580 aa2.76□□□□□ -1.97
ATXN3-217ENST00000553287 PSKH1P11801 424 aa2.76□□□□□ -1.97
ATXN3-217ENST00000553287 H2AFXP16104 143 aaPredicted RBP2.76□□□□□ -1.97
ATXN3-217ENST00000553287 PRDX2P32119 198 aa2.76□□□□□ -1.97
ATXN3-217ENST00000553287 TGM4P49221 684 aa2.76□□□□□ -1.97
ATXN3-217ENST00000553287 DAP3P51398 398 aaKnown RBP2.76□□□□□ -1.97
ATXN3-217ENST00000553287 HNRNPA3P51991 378 aaKnown RBP2.76□□□□□ -1.97
ATXN3-217ENST00000553287 RPL23AP62750 156 aaKnown RBP2.76□□□□□ -1.97
ATXN3-217ENST00000553287 CDK6Q00534 326 aa2.76□□□□□ -1.97
ATXN3-217ENST00000553287 ST3GAL3Q11203 375 aa2.76□□□□□ -1.97
ATXN3-217ENST00000553287 DYNC1I2Q13409 638 aaKnown RBP2.76□□□□□ -1.97
ATXN3-217ENST00000553287 SELPLGQ14242 412 aa2.76□□□□□ -1.97
ATXN3-217ENST00000553287 KCNJ8Q15842 424 aa2.76□□□□□ -1.97
ATXN3-217ENST00000553287 MICBQ29980 383 aa2.76□□□□□ -1.97
ATXN3-217ENST00000553287 LRRC10Q5BKY1 277 aa2.76□□□□□ -1.97
ATXN3-217ENST00000553287 MESTQ5EB52 335 aa2.76□□□□□ -1.97
ATXN3-217ENST00000553287 GLYATL3Q5SZD4 288 aa2.76□□□□□ -1.97
ATXN3-217ENST00000553287 TEX36Q5VZQ5 186 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms