RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 ABHD14BQ96IU4 210 aa3.57□□□□□ -1.84
SCFD1-208ENST00000553278 SLC35G5Q96KT7 338 aa3.57□□□□□ -1.84
SCFD1-208ENST00000553278 GNB1LQ9BYB4 327 aa3.57□□□□□ -1.84
SCFD1-208ENST00000553278 PLA2G12AQ9BZM1 189 aa3.57□□□□□ -1.84
SCFD1-208ENST00000553278 ALX4Q9H161 411 aaPredicted RBP3.57□□□□□ -1.84
SCFD1-208ENST00000553278 MED28Q9H204 178 aa3.57□□□□□ -1.84
SCFD1-208ENST00000553278 FKBP14Q9NWM8 211 aa3.57□□□□□ -1.84
SCFD1-208ENST00000553278 VPS29Q9UBQ0 182 aa3.57□□□□□ -1.84
SCFD1-208ENST00000553278 PLXNB3Q9ULL4 1909 aa3.57□□□□□ -1.84
SCFD1-208ENST00000553278 GOLGA6L4A6NEF3 574 aa3.56□□□□□ -1.84
SCFD1-208ENST00000553278 STK16O75716 305 aa3.56□□□□□ -1.84
SCFD1-208ENST00000553278 ALOX5APP20292 161 aa3.56□□□□□ -1.84
SCFD1-208ENST00000553278 GABRA3P34903 492 aa3.56□□□□□ -1.84
SCFD1-208ENST00000553278 PPP1R2P41236 205 aa3.56□□□□□ -1.84
SCFD1-208ENST00000553278 OR4D2P58180 307 aa3.56□□□□□ -1.84
SCFD1-208ENST00000553278 SPCS3P61009 180 aa3.56□□□□□ -1.84
SCFD1-208ENST00000553278 RAB5BP61020 215 aa3.56□□□□□ -1.84
SCFD1-208ENST00000553278 RANP62826 216 aaKnown RBP3.56□□□□□ -1.84
SCFD1-208ENST00000553278 TSPAN31Q12999 210 aa3.56□□□□□ -1.84
SCFD1-208ENST00000553278 CASP8Q14790 479 aa3.56□□□□□ -1.84
SCFD1-208ENST00000553278 ACSBG2Q5FVE4 666 aa3.56□□□□□ -1.84
SCFD1-208ENST00000553278 PPP1R2P3Q6NXS1 205 aa3.56□□□□□ -1.84
SCFD1-208ENST00000553278 SLC25A34Q6PIV7 304 aa3.56□□□□□ -1.84
SCFD1-208ENST00000553278 ANKRD36BP1Q96IX9 119 aa3.56□□□□□ -1.84
SCFD1-208ENST00000553278 PECRQ9BY49 303 aa3.56□□□□□ -1.84
SCFD1-208ENST00000553278 KCNIP2Q9NS61 270 aa3.56□□□□□ -1.84
SCFD1-208ENST00000553278 OPN4Q9UHM6 478 aa3.56□□□□□ -1.84
SCFD1-208ENST00000553278 DNAJC12Q9UKB3 198 aa3.56□□□□□ -1.84
SCFD1-208ENST00000553278 TRAPPC1Q9Y5R8 145 aa3.56□□□□□ -1.84
SCFD1-208ENST00000553278 S4R3C0 116 aa3.56□□□□□ -1.84
SCFD1-208ENST00000553278 PLA2R1Q13018 1463 aa3.55□□□□□ -1.84
SCFD1-208ENST00000553278 IGKV2D-24A0A075B6R9 120 aa3.55□□□□□ -1.84
SCFD1-208ENST00000553278 IGHV3OR15-7A0A075B7D8 119 aa3.55□□□□□ -1.84
SCFD1-208ENST00000553278 TGIF2-C20orf24A0A0A6YYL0 155 aa3.55□□□□□ -1.84
SCFD1-208ENST00000553278 MRASO14807 208 aa3.55□□□□□ -1.84
SCFD1-208ENST00000553278 DEDDO75618 318 aa3.55□□□□□ -1.84
SCFD1-208ENST00000553278 PDYNP01213 254 aa3.55□□□□□ -1.84
SCFD1-208ENST00000553278 IGLV7-43P04211 117 aa3.55□□□□□ -1.84
SCFD1-208ENST00000553278 GUSBP08236 651 aa3.55□□□□□ -1.84
SCFD1-208ENST00000553278 CAPZBP47756 277 aa3.55□□□□□ -1.84
SCFD1-208ENST00000553278 OR1E2P47887 323 aa3.55□□□□□ -1.84
SCFD1-208ENST00000553278 REG1BP48304 166 aa3.55□□□□□ -1.84
SCFD1-208ENST00000553278 ARF6P62330 175 aa3.55□□□□□ -1.84
SCFD1-208ENST00000553278 HERVK_113P63121 156 aa3.55□□□□□ -1.84
SCFD1-208ENST00000553278 JOSD1Q15040 202 aaPredicted RBP3.55□□□□□ -1.84
SCFD1-208ENST00000553278 HIST2H3PS2Q5TEC6 136 aa3.55□□□□□ -1.84
SCFD1-208ENST00000553278 FAM78BQ5VT40 261 aa3.55□□□□□ -1.84
SCFD1-208ENST00000553278 NEGR1Q7Z3B1 354 aa3.55□□□□□ -1.84
SCFD1-208ENST00000553278 SPIN2AQ99865 258 aa3.55□□□□□ -1.84
SCFD1-208ENST00000553278 SPIN2BQ9BPZ2 258 aa3.55□□□□□ -1.84
SCFD1-208ENST00000553278 C9orf16Q9BUW7 83 aa3.55□□□□□ -1.84
SCFD1-208ENST00000553278 TSSK6Q9BXA6 273 aa3.55□□□□□ -1.84
SCFD1-208ENST00000553278 GABARAPL1Q9H0R8 117 aa3.55□□□□□ -1.84
SCFD1-208ENST00000553278 UNC13AQ9UPW8 1703 aa3.55□□□□□ -1.84
SCFD1-208ENST00000553278 MYO10Q9HD67 2058 aa3.55□□□□□ -1.84
SCFD1-208ENST00000553278 ZFYVE9O95405 1425 aa3.54□□□□□ -1.84
SCFD1-208ENST00000553278 CLDN24A6NM45 220 aa3.54□□□□□ -1.84
SCFD1-208ENST00000553278 LCE1EQ5T753 118 aa3.54□□□□□ -1.84
SCFD1-208ENST00000553278 SFXN4Q6P4A7 337 aa3.54□□□□□ -1.84
SCFD1-208ENST00000553278 TBPL2Q6SJ96 375 aa3.54□□□□□ -1.84
SCFD1-208ENST00000553278 HIST2H3AQ71DI3 136 aa3.54□□□□□ -1.84
SCFD1-208ENST00000553278 UBL4BQ8N7F7 174 aa3.54□□□□□ -1.84
SCFD1-208ENST00000553278 CLDN22Q8N7P3 220 aa3.54□□□□□ -1.84
SCFD1-208ENST00000553278 CYYR1Q96J86 154 aa3.54□□□□□ -1.84
SCFD1-208ENST00000553278 B9D2Q9BPU9 175 aa3.54□□□□□ -1.84
SCFD1-208ENST00000553278 ARL2BPQ9Y2Y0 163 aa3.54□□□□□ -1.84
SCFD1-208ENST00000553278 FIS1Q9Y3D6 152 aa3.54□□□□□ -1.84
SCFD1-208ENST00000553278 PCYT1BQ9Y5K3 369 aaPredicted RBP3.54□□□□□ -1.84
SCFD1-208ENST00000553278 KMT2EQ8IZD2 1858 aa3.54□□□□□ -1.84
SCFD1-208ENST00000553278 RPRD2Q5VT52 1461 aaKnown RBP3.54□□□□□ -1.84
SCFD1-208ENST00000553278 ADGRL3Q9HAR2 1447 aa3.53□□□□□ -1.84
SCFD1-208ENST00000553278 IGLV4-60A0A075B6I1 120 aa3.53□□□□□ -1.84
SCFD1-208ENST00000553278 IGLV3-12A0A075B6K2 115 aa3.53□□□□□ -1.84
SCFD1-208ENST00000553278 OR5F1O95221 314 aa3.53□□□□□ -1.84
SCFD1-208ENST00000553278 WISP3O95389 354 aaPredicted RBP3.53□□□□□ -1.84
SCFD1-208ENST00000553278 CDK2P24941 298 aa3.53□□□□□ -1.84
SCFD1-208ENST00000553278 CTBP2P56545 445 aa3.53□□□□□ -1.84
SCFD1-208ENST00000553278 KRTAP10-12P60413 245 aa3.53□□□□□ -1.84
SCFD1-208ENST00000553278 GLO1Q04760 184 aa3.53□□□□□ -1.84
SCFD1-208ENST00000553278 KRTAP5-1Q6L8H4 278 aa3.53□□□□□ -1.84
SCFD1-208ENST00000553278 ZNF567Q8N184 647 aa3.53□□□□□ -1.84
SCFD1-208ENST00000553278 KLF14Q8TD94 323 aaPredicted RBP3.53□□□□□ -1.84
SCFD1-208ENST00000553278 DGCR14Q96DF8 476 aaKnown RBP3.53□□□□□ -1.84
SCFD1-208ENST00000553278 STARD4Q96DR4 205 aa3.53□□□□□ -1.84
SCFD1-208ENST00000553278 DIRAS2Q96HU8 199 aa3.53□□□□□ -1.84
SCFD1-208ENST00000553278 OR52B2Q96RD2 323 aa3.53□□□□□ -1.84
SCFD1-208ENST00000553278 ZNF286AQ9HBT8 521 aa3.53□□□□□ -1.84
SCFD1-208ENST00000553278 ZNF586Q9NXT0 402 aa3.53□□□□□ -1.84
SCFD1-208ENST00000553278 BRWD3Q6RI45 1802 aa3.53□□□□□ -1.84
SCFD1-208ENST00000553278 TUBGCP6Q96RT7 1819 aa3.53□□□□□ -1.84
SCFD1-208ENST00000553278 FLT4P35916 1363 aa3.52□□□□□ -1.85
SCFD1-208ENST00000553278 TICRRQ7Z2Z1 1910 aa3.52□□□□□ -1.85
SCFD1-208ENST00000553278 TRAV40A0A0B4J280 105 aa3.52□□□□□ -1.85
SCFD1-208ENST00000553278 ZNF98A6NK75 572 aa3.52□□□□□ -1.85
SCFD1-208ENST00000553278 DISC1C4P0D8 188 aa3.52□□□□□ -1.85
SCFD1-208ENST00000553278 C4orf51C9J302 202 aa3.52□□□□□ -1.85
SCFD1-208ENST00000553278 DENRO43583 198 aaKnown RBP3.52□□□□□ -1.85
SCFD1-208ENST00000553278 FADS1O60427 444 aa3.52□□□□□ -1.85
SCFD1-208ENST00000553278 ZNF324O75467 553 aaPredicted RBP3.52□□□□□ -1.85
SCFD1-208ENST00000553278 TGFBR2P37173 567 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms