RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 LAIR2Q6ISS4 152 aa1.64□□□□□ -2.15
CCDC38-208ENST00000549876 Q6ZRU5 148 aa1.64□□□□□ -2.15
CCDC38-208ENST00000549876 TMEM144Q7Z5S9 345 aa1.64□□□□□ -2.15
CCDC38-208ENST00000549876 ZFP82Q8N141 532 aa1.64□□□□□ -2.15
CCDC38-208ENST00000549876 KRTCAP2Q8N6L1 136 aa1.64□□□□□ -2.15
CCDC38-208ENST00000549876 OR1M1Q8NGA1 313 aa1.64□□□□□ -2.15
CCDC38-208ENST00000549876 OR8K1Q8NGG5 319 aa1.64□□□□□ -2.15
CCDC38-208ENST00000549876 ZNRF2Q8NHG8 242 aa1.64□□□□□ -2.15
CCDC38-208ENST00000549876 KLF14Q8TD94 323 aaPredicted RBP1.64□□□□□ -2.15
CCDC38-208ENST00000549876 C16orf78Q8WTQ4 265 aa1.64□□□□□ -2.15
CCDC38-208ENST00000549876 TRIB3Q96RU7 358 aa1.64□□□□□ -2.15
CCDC38-208ENST00000549876 SHANK2-AS3Q9BTD1 123 aa1.64□□□□□ -2.15
CCDC38-208ENST00000549876 GNB1LQ9BYB4 327 aa1.64□□□□□ -2.15
CCDC38-208ENST00000549876 EIF5A2Q9GZV4 153 aaKnown RBP1.64□□□□□ -2.15
CCDC38-208ENST00000549876 GTSF1LQ9H1H1 148 aa1.64□□□□□ -2.15
CCDC38-208ENST00000549876 TXNIPQ9H3M7 391 aa1.64□□□□□ -2.15
CCDC38-208ENST00000549876 ZNF492Q9P255 531 aa1.64□□□□□ -2.15
CCDC38-208ENST00000549876 LINC00527Q9UJ94 153 aa1.64□□□□□ -2.15
CCDC38-208ENST00000549876 SLC22A13Q9Y226 551 aa1.64□□□□□ -2.15
CCDC38-208ENST00000549876 POLR1DQ9Y2S0 133 aa1.64□□□□□ -2.15
CCDC38-208ENST00000549876 NPATQ14207 1427 aa1.64□□□□□ -2.15
CCDC38-208ENST00000549876 SCN1AP35498 2009 aa1.64□□□□□ -2.15
CCDC38-208ENST00000549876 LOXHD1Q8IVV2 1947 aa1.64□□□□□ -2.15
CCDC38-208ENST00000549876 SNAPC4Q5SXM2 1469 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 RPRD2Q5VT52 1461 aaKnown RBP1.63□□□□□ -2.15
CCDC38-208ENST00000549876 SVILO95425 2214 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 IGHV3OR15-7A0A075B7D8 119 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 IGHV3OR16-8A0A075B7F1 116 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 OR5H14A6NHG9 310 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 OR6C70A6NIJ9 312 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 D6RAR5 112 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 TRAPPC3O43617 180 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 PDYNP01213 254 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 IGLV7-43P04211 117 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 IFNA16P05015 189 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 FBP1P09467 338 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 HIST1H1EP10412 219 aaKnown RBP1.63□□□□□ -2.15
CCDC38-208ENST00000549876 GABRA1P14867 456 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 CXCL2P19875 107 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 CXCL3P19876 107 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 AP3S2P59780 193 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 CCL7P80098 99 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 HPCAP84074 193 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 CASP8Q14790 479 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 TAF9Q16594 264 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 HIST3H3Q16695 136 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 TMEM176BQ3YBM2 270 aaPredicted RBP1.63□□□□□ -2.15
CCDC38-208ENST00000549876 MESTQ5EB52 335 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 N4BP2L1Q5TBK1 243 aaPredicted RBP1.63□□□□□ -2.15
CCDC38-208ENST00000549876 SPOPLQ6IQ16 392 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 LCN8Q6JVE9 175 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 EBLN2Q6P2I7 272 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 TBPL2Q6SJ96 375 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 C16orf47Q6ZP98 133 aaPredicted RBP1.63□□□□□ -2.15
CCDC38-208ENST00000549876 TCF23Q7RTU1 214 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 DAZ4Q86SG3 579 aaKnown RBP1.63□□□□□ -2.15
CCDC38-208ENST00000549876 COMMD7Q86VX2 200 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 RPRMLQ8N4K4 120 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 C3orf22Q8N5N4 141 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 YIPF7Q8N8F6 280 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 FER1L6-AS1Q8NA97 138 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 TMEM161BQ8NDZ6 487 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 JOSD2Q8TAC2 188 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 SPPL2BQ8TCT7 592 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 KCTD4Q8WVF5 259 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 MAL2Q969L2 176 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 APOBEC3DQ96AK3 386 aaPredicted RBP1.63□□□□□ -2.15
CCDC38-208ENST00000549876 OTUB2Q96DC9 234 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 ACY3Q96HD9 319 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 CCDC42Q96M95 316 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 OR2V2Q96R30 315 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 B9D2Q9BPU9 175 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 ALX4Q9H161 411 aaPredicted RBP1.63□□□□□ -2.15
CCDC38-208ENST00000549876 C11orf49Q9H6J7 331 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 HES4Q9HCC6 221 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 DAZ1Q9NQZ3 744 aaKnown RBP1.63□□□□□ -2.15
CCDC38-208ENST00000549876 DKKL1Q9UK85 242 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 ALG5Q9Y673 324 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 PLXNB3Q9ULL4 1909 aa1.63□□□□□ -2.15
CCDC38-208ENST00000549876 BAZ2AQ9UIF9 1905 aaKnown RBP1.62□□□□□ -2.15
CCDC38-208ENST00000549876 A0A1W2PQL4 384 aaPredicted RBP1.62□□□□□ -2.15
CCDC38-208ENST00000549876 C5orf49A4QMS7 147 aa1.62□□□□□ -2.15
CCDC38-208ENST00000549876 C16orf90A8MZG2 172 aa1.62□□□□□ -2.15
CCDC38-208ENST00000549876 TMEM114B3SHH9 223 aa1.62□□□□□ -2.15
CCDC38-208ENST00000549876 B4DEV8 164 aa1.62□□□□□ -2.15
CCDC38-208ENST00000549876 LYPLA2O95372 231 aa1.62□□□□□ -2.15
CCDC38-208ENST00000549876 FSTL3O95633 263 aa1.62□□□□□ -2.15
CCDC38-208ENST00000549876 GPR75O95800 540 aa1.62□□□□□ -2.15
CCDC38-208ENST00000549876 RPS17P08708 135 aaKnown RBP1.62□□□□□ -2.15
CCDC38-208ENST00000549876 OR4A8P0C604 315 aa1.62□□□□□ -2.15
CCDC38-208ENST00000549876 OR13C7P0DN81 318 aa1.62□□□□□ -2.15
CCDC38-208ENST00000549876 OR12D1P0DN82 309 aa1.62□□□□□ -2.15
CCDC38-208ENST00000549876 CGB3P0DN86 165 aa1.62□□□□□ -2.15
CCDC38-208ENST00000549876 CGB7P0DN87 165 aa1.62□□□□□ -2.15
CCDC38-208ENST00000549876 EVI2BP34910 448 aa1.62□□□□□ -2.15
CCDC38-208ENST00000549876 HSPA9P38646 679 aaKnown RBP1.62□□□□□ -2.15
CCDC38-208ENST00000549876 OMPP47874 163 aa1.62□□□□□ -2.15
CCDC38-208ENST00000549876 IDH3GP51553 393 aaPredicted RBP1.62□□□□□ -2.15
CCDC38-208ENST00000549876 GABARAPL2P60520 117 aa1.62□□□□□ -2.15
CCDC38-208ENST00000549876 RPS24P62847 133 aaKnown RBP1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms