RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 OPN4Q9UHM6 478 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 UBE2J1Q9Y385 318 aaPredicted RBP6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 MTORP42345 2549 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 CR1P17927 2039 aa6.66□□□□□ -1.34
DEPDC4-207ENST00000549249 F8P00451 2351 aa6.65□□□□□ -1.34
DEPDC4-207ENST00000549249 IGHV4-30-2A0A087WSY4 118 aa6.65□□□□□ -1.34
DEPDC4-207ENST00000549249 A0A0A6YYJ9 748 aa6.65□□□□□ -1.34
DEPDC4-207ENST00000549249 KBTBD11-OT1A0A1B0GTJ5 212 aa6.65□□□□□ -1.34
DEPDC4-207ENST00000549249 hADV38S2A0JD32 116 aa6.65□□□□□ -1.34
DEPDC4-207ENST00000549249 KIAA1324LA8MWY0 1029 aaPredicted RBP6.65□□□□□ -1.34
DEPDC4-207ENST00000549249 PHF1O43189 567 aaPredicted RBP6.65□□□□□ -1.34
DEPDC4-207ENST00000549249 SPINT2O43291 252 aa6.65□□□□□ -1.34
DEPDC4-207ENST00000549249 RLN1P04808 185 aa6.65□□□□□ -1.34
DEPDC4-207ENST00000549249 IL5P05113 134 aa6.65□□□□□ -1.34
DEPDC4-207ENST00000549249 ZNF728P0DKX0 622 aa6.65□□□□□ -1.34
DEPDC4-207ENST00000549249 IL2RGP31785 369 aa6.65□□□□□ -1.34
DEPDC4-207ENST00000549249 ERVFRD-1P60508 538 aa6.65□□□□□ -1.34
DEPDC4-207ENST00000549249 HERV-K104P61576 105 aa6.65□□□□□ -1.34
DEPDC4-207ENST00000549249 LMO4P61968 165 aa6.65□□□□□ -1.34
DEPDC4-207ENST00000549249 SURF2Q15527 256 aaPredicted RBP6.65□□□□□ -1.34
DEPDC4-207ENST00000549249 PRAMEF5Q5TYX0 476 aa6.65□□□□□ -1.34
DEPDC4-207ENST00000549249 TMED4Q7Z7H5 227 aa6.65□□□□□ -1.34
DEPDC4-207ENST00000549249 SLC25A42Q86VD7 318 aa6.65□□□□□ -1.34
DEPDC4-207ENST00000549249 FAM185AQ8N0U4 392 aa6.65□□□□□ -1.34
DEPDC4-207ENST00000549249 C11orf42Q8N5U0 333 aa6.65□□□□□ -1.34
DEPDC4-207ENST00000549249 ZNF565Q8N9K5 539 aa6.65□□□□□ -1.34
DEPDC4-207ENST00000549249 OR10V1Q8NGI7 309 aa6.65□□□□□ -1.34
DEPDC4-207ENST00000549249 C8orf46Q8TAG6 207 aa6.65□□□□□ -1.34
DEPDC4-207ENST00000549249 FAM168AQ92567 244 aa6.65□□□□□ -1.34
DEPDC4-207ENST00000549249 C5orf30Q96GV9 206 aa6.65□□□□□ -1.34
DEPDC4-207ENST00000549249 RSRP1Q9BUV0 290 aa6.65□□□□□ -1.34
DEPDC4-207ENST00000549249 SSBP3Q9BWW4 388 aaPredicted RBP6.65□□□□□ -1.34
DEPDC4-207ENST00000549249 BARX1Q9HBU1 254 aaPredicted RBP6.65□□□□□ -1.34
DEPDC4-207ENST00000549249 GFOD1Q9NXC2 390 aa6.65□□□□□ -1.34
DEPDC4-207ENST00000549249 TAS2R3Q9NYW6 316 aa6.65□□□□□ -1.34
DEPDC4-207ENST00000549249 IDI2-AS1Q9NZ38 188 aa6.65□□□□□ -1.34
DEPDC4-207ENST00000549249 LPAR3Q9UBY5 353 aa6.65□□□□□ -1.34
DEPDC4-207ENST00000549249 CLN8Q9UBY8 286 aa6.65□□□□□ -1.34
DEPDC4-207ENST00000549249 JPT1Q9UK76 154 aa6.65□□□□□ -1.34
DEPDC4-207ENST00000549249 OR2W1Q9Y3N9 320 aa6.65□□□□□ -1.34
DEPDC4-207ENST00000549249 WNK2Q9Y3S1 2297 aa6.64□□□□□ -1.35
DEPDC4-207ENST00000549249 TRBV23-1A0A0A0MS06 115 aa6.64□□□□□ -1.35
DEPDC4-207ENST00000549249 IGHV4-61A0A0C4DH41 118 aa6.64□□□□□ -1.35
DEPDC4-207ENST00000549249 FAM172BPA6NC97 362 aa6.64□□□□□ -1.35
DEPDC4-207ENST00000549249 SLC31A2O15432 143 aa6.64□□□□□ -1.35
DEPDC4-207ENST00000549249 HSPA12AO43301 675 aa6.64□□□□□ -1.35
DEPDC4-207ENST00000549249 YPEL1O60688 119 aa6.64□□□□□ -1.35
DEPDC4-207ENST00000549249 PRAF2O60831 178 aa6.64□□□□□ -1.35
DEPDC4-207ENST00000549249 DHFRP00374 187 aa6.64□□□□□ -1.35
DEPDC4-207ENST00000549249 IGLV2-14P01704 120 aa6.64□□□□□ -1.35
DEPDC4-207ENST00000549249 CTSDP07339 412 aaPredicted RBP6.64□□□□□ -1.35
DEPDC4-207ENST00000549249 OR4E1P0C645 316 aa6.64□□□□□ -1.35
DEPDC4-207ENST00000549249 ZBTB25P24278 435 aa6.64□□□□□ -1.35
DEPDC4-207ENST00000549249 ZFP36P26651 326 aaKnown RBP6.64□□□□□ -1.35
DEPDC4-207ENST00000549249 GNRHRP30968 328 aa6.64□□□□□ -1.35
DEPDC4-207ENST00000549249 CEACAM6P40199 344 aa6.64□□□□□ -1.35
DEPDC4-207ENST00000549249 ECI1P42126 302 aa6.64□□□□□ -1.35
DEPDC4-207ENST00000549249 GNB2P62879 340 aa6.64□□□□□ -1.35
DEPDC4-207ENST00000549249 SUPT4H1P63272 117 aaKnown RBP6.64□□□□□ -1.35
DEPDC4-207ENST00000549249 DHODHQ02127 395 aa6.64□□□□□ -1.35
DEPDC4-207ENST00000549249 PPP1R1AQ13522 171 aa6.64□□□□□ -1.35
DEPDC4-207ENST00000549249 MORN2Q502X0 79 aa6.64□□□□□ -1.35
DEPDC4-207ENST00000549249 ZNF626Q68DY1 528 aa6.64□□□□□ -1.35
DEPDC4-207ENST00000549249 CLEC2AQ6UVW9 174 aa6.64□□□□□ -1.35
DEPDC4-207ENST00000549249 SPNS3Q6ZMD2 512 aa6.64□□□□□ -1.35
DEPDC4-207ENST00000549249 GLDNQ6ZMI3 551 aaPredicted RBP6.64□□□□□ -1.35
DEPDC4-207ENST00000549249 ZNF818PQ6ZRF7 136 aa6.64□□□□□ -1.35
DEPDC4-207ENST00000549249 NLRC3Q7RTR2 1065 aa6.64□□□□□ -1.35
DEPDC4-207ENST00000549249 LY6G5BQ8NDX9 201 aa6.64□□□□□ -1.35
DEPDC4-207ENST00000549249 SECTM1Q8WVN6 248 aa6.64□□□□□ -1.35
DEPDC4-207ENST00000549249 LEAP2Q969E1 77 aa6.64□□□□□ -1.35
DEPDC4-207ENST00000549249 ZNF714Q96N38 554 aa6.64□□□□□ -1.35
DEPDC4-207ENST00000549249 YPEL2Q96QA6 119 aa6.64□□□□□ -1.35
DEPDC4-207ENST00000549249 PIMREGQ9BSJ6 248 aa6.64□□□□□ -1.35
DEPDC4-207ENST00000549249 SLC5A7Q9GZV3 580 aa6.64□□□□□ -1.35
DEPDC4-207ENST00000549249 ALX4Q9H161 411 aaPredicted RBP6.64□□□□□ -1.35
DEPDC4-207ENST00000549249 OR2S2Q9NQN1 319 aa6.64□□□□□ -1.35
DEPDC4-207ENST00000549249 CCL28Q9NRJ3 127 aa6.64□□□□□ -1.35
DEPDC4-207ENST00000549249 RPUSD1Q9UJJ7 312 aaKnown RBP6.64□□□□□ -1.35
DEPDC4-207ENST00000549249 FBN2P35556 2912 aa6.64□□□□□ -1.35
DEPDC4-207ENST00000549249 DCHS2Q6V1P9 2916 aa6.64□□□□□ -1.35
DEPDC4-207ENST00000549249 OTOGQ6ZRI0 2925 aa6.64□□□□□ -1.35
DEPDC4-207ENST00000549249 A0A096LNT2 108 aa6.63□□□□□ -1.35
DEPDC4-207ENST00000549249 C9orf170A2RU37 121 aa6.63□□□□□ -1.35
DEPDC4-207ENST00000549249 CRYM-AS1A6NIL9 109 aa6.63□□□□□ -1.35
DEPDC4-207ENST00000549249 C17orf98A8MV24 154 aa6.63□□□□□ -1.35
DEPDC4-207ENST00000549249 A8MXK9 166 aa6.63□□□□□ -1.35
DEPDC4-207ENST00000549249 NDUFS8O00217 210 aa6.63□□□□□ -1.35
DEPDC4-207ENST00000549249 HSD17B6O14756 317 aa6.63□□□□□ -1.35
DEPDC4-207ENST00000549249 IGHV3-7P01780 117 aa6.63□□□□□ -1.35
DEPDC4-207ENST00000549249 OR8U9P0C7N5 309 aa6.63□□□□□ -1.35
DEPDC4-207ENST00000549249 AKR1C4P17516 323 aa6.63□□□□□ -1.35
DEPDC4-207ENST00000549249 LUMP51884 338 aaPredicted RBP6.63□□□□□ -1.35
DEPDC4-207ENST00000549249 DLX1P56177 255 aa6.63□□□□□ -1.35
DEPDC4-207ENST00000549249 PIGPP57054 158 aa6.63□□□□□ -1.35
DEPDC4-207ENST00000549249 UBE2MP61081 183 aaKnown RBP6.63□□□□□ -1.35
DEPDC4-207ENST00000549249 PAX2Q02962 417 aa6.63□□□□□ -1.35
DEPDC4-207ENST00000549249 CBX3Q13185 183 aa6.63□□□□□ -1.35
DEPDC4-207ENST00000549249 DHRS2Q13268 280 aa6.63□□□□□ -1.35
DEPDC4-207ENST00000549249 DEFB113Q30KQ7 82 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms