RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 ZNF488Q96MN9 340 aa8.38□□□□□ -1.07
SMARCD1-205ENST00000548573 SMIM7Q9BQ49 75 aa8.38□□□□□ -1.07
SMARCD1-205ENST00000548573 SLC39A9Q9NUM3 307 aa8.38□□□□□ -1.07
SMARCD1-205ENST00000548573 PRSS50Q9UI38 385 aa8.38□□□□□ -1.07
SMARCD1-205ENST00000548573 BOKQ9UMX3 212 aaPredicted RBP8.38□□□□□ -1.07
SMARCD1-205ENST00000548573 ZNF503-AS2A6NEH8 195 aa8.37□□□□□ -1.07
SMARCD1-205ENST00000548573 IL2RGP31785 369 aa8.37□□□□□ -1.07
SMARCD1-205ENST00000548573 DUSP3P51452 185 aaPredicted RBP8.37□□□□□ -1.07
SMARCD1-205ENST00000548573 JOSD1Q15040 202 aaPredicted RBP8.37□□□□□ -1.07
SMARCD1-205ENST00000548573 SPANXN5Q5MJ07 72 aa8.37□□□□□ -1.07
SMARCD1-205ENST00000548573 C9orf135Q5VTT2 229 aa8.37□□□□□ -1.07
SMARCD1-205ENST00000548573 PMS2CLQ68D20 193 aa8.37□□□□□ -1.07
SMARCD1-205ENST00000548573 Q6P435 159 aa8.37□□□□□ -1.07
SMARCD1-205ENST00000548573 TMEM14EPQ6UXP3 125 aa8.37□□□□□ -1.07
SMARCD1-205ENST00000548573 LHX4Q969G2 390 aa8.37□□□□□ -1.07
SMARCD1-205ENST00000548573 OR51I2Q9H344 312 aa8.37□□□□□ -1.07
SMARCD1-205ENST00000548573 PPP1R3CQ9UQK1 317 aa8.37□□□□□ -1.07
SMARCD1-205ENST00000548573 RNF212BA8MTL3 300 aa8.36□□□□□ -1.07
SMARCD1-205ENST00000548573 SERPINA7P05543 415 aa8.36□□□□□ -1.07
SMARCD1-205ENST00000548573 JMJD7P0C870 316 aa8.36□□□□□ -1.07
SMARCD1-205ENST00000548573 OTX2P32243 289 aa8.36□□□□□ -1.07
SMARCD1-205ENST00000548573 LHX2P50458 406 aa8.36□□□□□ -1.07
SMARCD1-205ENST00000548573 PLP2Q04941 152 aa8.36□□□□□ -1.07
SMARCD1-205ENST00000548573 SLC38A11Q08AI6 406 aa8.36□□□□□ -1.07
SMARCD1-205ENST00000548573 ADIRFQ15847 76 aa8.36□□□□□ -1.07
SMARCD1-205ENST00000548573 BSXQ3C1V8 233 aa8.36□□□□□ -1.07
SMARCD1-205ENST00000548573 DBX2Q6ZNG2 339 aa8.36□□□□□ -1.07
SMARCD1-205ENST00000548573 C16orf82Q7Z2V1 217 aa8.36□□□□□ -1.07
SMARCD1-205ENST00000548573 TUSC5Q8IXB3 177 aa8.36□□□□□ -1.07
SMARCD1-205ENST00000548573 TDHQ8IZJ6 230 aa8.36□□□□□ -1.07
SMARCD1-205ENST00000548573 C17orf78Q8N4C9 275 aa8.36□□□□□ -1.07
SMARCD1-205ENST00000548573 RPP25LQ8N5L8 163 aaKnown RBP8.36□□□□□ -1.07
SMARCD1-205ENST00000548573 OR51G1Q8NGK1 321 aa8.36□□□□□ -1.07
SMARCD1-205ENST00000548573 RHOVQ96L33 236 aa8.36□□□□□ -1.07
SMARCD1-205ENST00000548573 GPR87Q9BY21 358 aa8.36□□□□□ -1.07
SMARCD1-205ENST00000548573 UBE2L5PA0A1B0GUS4 154 aa8.36□□□□□ -1.07
SMARCD1-205ENST00000548573 MKRN2OSH3BPM6 223 aa8.36□□□□□ -1.07
SMARCD1-205ENST00000548573 J3QT63 122 aa8.36□□□□□ -1.07
SMARCD1-205ENST00000548573 ZNHIT1O43257 154 aa8.36□□□□□ -1.07
SMARCD1-205ENST00000548573 MBP02144 154 aa8.36□□□□□ -1.07
SMARCD1-205ENST00000548573 FGF7P21781 194 aa8.36□□□□□ -1.07
SMARCD1-205ENST00000548573 PSMB3P49720 205 aa8.36□□□□□ -1.07
SMARCD1-205ENST00000548573 ELLP55199 621 aaPredicted RBP8.36□□□□□ -1.07
SMARCD1-205ENST00000548573 FOXG1P55316 489 aaPredicted RBP8.36□□□□□ -1.07
SMARCD1-205ENST00000548573 CLDN18P56856 261 aa8.36□□□□□ -1.07
SMARCD1-205ENST00000548573 RPL23P62829 140 aaKnown RBP8.36□□□□□ -1.07
SMARCD1-205ENST00000548573 ATP6V1FQ16864 119 aa8.36□□□□□ -1.07
SMARCD1-205ENST00000548573 ZNF497Q6ZNH5 498 aa8.36□□□□□ -1.07
SMARCD1-205ENST00000548573 SSX9Q7RTT3 188 aa8.36□□□□□ -1.07
SMARCD1-205ENST00000548573 OR1P1Q8NH06 330 aa8.36□□□□□ -1.07
SMARCD1-205ENST00000548573 OR5B12Q96R08 314 aa8.36□□□□□ -1.07
SMARCD1-205ENST00000548573 ACTR3CQ9C0K3 210 aaPredicted RBP8.36□□□□□ -1.07
SMARCD1-205ENST00000548573 SMOC1Q9H4F8 434 aa8.36□□□□□ -1.07
SMARCD1-205ENST00000548573 RBM7Q9Y580 266 aaKnown RBP8.36□□□□□ -1.07
SMARCD1-205ENST00000548573 SDK1Q7Z5N4 2213 aa8.36□□□□□ -1.07
SMARCD1-205ENST00000548573 SDK2Q58EX2 2172 aa8.35□□□□□ -1.07
SMARCD1-205ENST00000548573 A0A087X0M5 115 aa8.35□□□□□ -1.07
SMARCD1-205ENST00000548573 CTXND1A0A1B0GTU2 59 aa8.35□□□□□ -1.07
SMARCD1-205ENST00000548573 A0A1B0GX30 115 aa8.35□□□□□ -1.07
SMARCD1-205ENST00000548573 LILRA1O75019 489 aa8.35□□□□□ -1.07
SMARCD1-205ENST00000548573 SYNGR4O95473 234 aa8.35□□□□□ -1.07
SMARCD1-205ENST00000548573 IGKV1D-33P01593 117 aa8.35□□□□□ -1.07
SMARCD1-205ENST00000548573 IGKV1-33P01594 117 aa8.35□□□□□ -1.07
SMARCD1-205ENST00000548573 COL10A1Q03692 680 aa8.35□□□□□ -1.07
SMARCD1-205ENST00000548573 TNFRSF9Q07011 255 aa8.35□□□□□ -1.07
SMARCD1-205ENST00000548573 SSPNQ14714 243 aa8.35□□□□□ -1.07
SMARCD1-205ENST00000548573 LBHQ53QV2 105 aaPredicted RBP8.35□□□□□ -1.07
SMARCD1-205ENST00000548573 BEND4Q6ZU67 534 aa8.35□□□□□ -1.07
SMARCD1-205ENST00000548573 Q8IYB0 196 aa8.35□□□□□ -1.07
SMARCD1-205ENST00000548573 FGFRL1Q8N441 504 aa8.35□□□□□ -1.07
SMARCD1-205ENST00000548573 DRAM1Q8N682 238 aa8.35□□□□□ -1.07
SMARCD1-205ENST00000548573 APH1AQ96BI3 265 aa8.35□□□□□ -1.07
SMARCD1-205ENST00000548573 ANAPC16Q96DE5 110 aa8.35□□□□□ -1.07
SMARCD1-205ENST00000548573 ACY3Q96HD9 319 aa8.35□□□□□ -1.07
SMARCD1-205ENST00000548573 ZNF703Q9H7S9 590 aaPredicted RBP8.35□□□□□ -1.07
SMARCD1-205ENST00000548573 MANBALQ9NQG1 85 aa8.35□□□□□ -1.07
SMARCD1-205ENST00000548573 MBNL3Q9NUK0 354 aaKnown RBP8.35□□□□□ -1.07
SMARCD1-205ENST00000548573 TRAPPC2LQ9UL33 140 aa8.35□□□□□ -1.07
SMARCD1-205ENST00000548573 KCNS2Q9ULS6 477 aa8.35□□□□□ -1.07
SMARCD1-205ENST00000548573 CEP290O15078 2479 aa8.35□□□□□ -1.07
SMARCD1-205ENST00000548573 ARGFXA6NJG6 315 aa8.34□□□□□ -1.07
SMARCD1-205ENST00000548573 B4E171 279 aa8.34□□□□□ -1.07
SMARCD1-205ENST00000548573 PPP5D1E7EU14 171 aa8.34□□□□□ -1.07
SMARCD1-205ENST00000548573 H7BYZ3 331 aa8.34□□□□□ -1.07
SMARCD1-205ENST00000548573 WDR1O75083 606 aa8.34□□□□□ -1.07
SMARCD1-205ENST00000548573 RHBDL1O75783 438 aa8.34□□□□□ -1.07
SMARCD1-205ENST00000548573 AMBPP02760 352 aa8.34□□□□□ -1.07
SMARCD1-205ENST00000548573 CD55P08174 381 aa8.34□□□□□ -1.07
SMARCD1-205ENST00000548573 ZNF16P17020 682 aaPredicted RBP8.34□□□□□ -1.07
SMARCD1-205ENST00000548573 WNT5AP41221 380 aa8.34□□□□□ -1.07
SMARCD1-205ENST00000548573 TSPAN7P41732 249 aa8.34□□□□□ -1.07
SMARCD1-205ENST00000548573 GALR1P47211 349 aa8.34□□□□□ -1.07
SMARCD1-205ENST00000548573 PDLIM4P50479 330 aa8.34□□□□□ -1.07
SMARCD1-205ENST00000548573 FAM3BP58499 235 aaPredicted RBP8.34□□□□□ -1.07
SMARCD1-205ENST00000548573 SRYQ05066 204 aa8.34□□□□□ -1.07
SMARCD1-205ENST00000548573 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.34□□□□□ -1.07
SMARCD1-205ENST00000548573 ZBTB34Q8NCN2 500 aa8.34□□□□□ -1.07
SMARCD1-205ENST00000548573 OR1K1Q8NGR3 316 aa8.34□□□□□ -1.07
SMARCD1-205ENST00000548573 FAM173AQ9BQD7 235 aa8.34□□□□□ -1.07
SMARCD1-205ENST00000548573 B4GALT7Q9UBV7 327 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms