RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 CD55P08174 381 aa17.44■□□□□ 0.38
RITA1-201ENST00000548278 EIF4EBP1Q13541 118 aaPredicted RBP17.44■□□□□ 0.38
RITA1-201ENST00000548278 ZNF585BQ52M93 769 aa17.44■□□□□ 0.38
RITA1-201ENST00000548278 STUMQ69YW2 141 aa17.44■□□□□ 0.38
RITA1-201ENST00000548278 BSCL2Q96G97 398 aaPredicted RBP17.44■□□□□ 0.38
RITA1-201ENST00000548278 DIRC2Q96SL1 478 aa17.44■□□□□ 0.38
RITA1-201ENST00000548278 PLEKHF2Q9H8W4 249 aa17.44■□□□□ 0.38
RITA1-201ENST00000548278 GZMHP20718 246 aa17.43■□□□□ 0.38
RITA1-201ENST00000548278 P2RX3P56373 397 aa17.43■□□□□ 0.38
RITA1-201ENST00000548278 POLR2GP62487 172 aaKnown RBP eCLIP17.43■□□□□ 0.38
RITA1-201ENST00000548278 ID3Q02535 119 aa17.43■□□□□ 0.38
RITA1-201ENST00000548278 GPR146Q96CH1 333 aa17.43■□□□□ 0.38
RITA1-201ENST00000548278 SDSLQ96GA7 329 aa17.43■□□□□ 0.38
RITA1-201ENST00000548278 DLL1O00548 723 aa17.43■□□□□ 0.38
RITA1-201ENST00000548278 PITX3O75364 302 aa17.43■□□□□ 0.38
RITA1-201ENST00000548278 GAPDHP04406 335 aaKnown RBP17.43■□□□□ 0.38
RITA1-201ENST00000548278 SLC25A6P12236 298 aa17.43■□□□□ 0.38
RITA1-201ENST00000548278 MSMO1Q15800 293 aa17.43■□□□□ 0.38
RITA1-201ENST00000548278 NCMAPQ5T1S8 102 aa17.43■□□□□ 0.38
RITA1-201ENST00000548278 TGIF2LYQ8IUE0 185 aa17.43■□□□□ 0.38
RITA1-201ENST00000548278 ZNF561Q8N587 486 aa17.43■□□□□ 0.38
RITA1-201ENST00000548278 TMED6Q8WW62 240 aa17.43■□□□□ 0.38
RITA1-201ENST00000548278 ZZEF1O43149 2961 aa17.43■□□□□ 0.38
RITA1-201ENST00000548278 IGHV3-43A0A0B4J1X8 118 aa17.42■□□□□ 0.38
RITA1-201ENST00000548278 RNF212BA8MTL3 300 aa17.42■□□□□ 0.38
RITA1-201ENST00000548278 SHISA9B4DS77 424 aa17.42■□□□□ 0.38
RITA1-201ENST00000548278 TEX46H3BTG2 121 aa17.42■□□□□ 0.38
RITA1-201ENST00000548278 FGF16O43320 207 aa17.42■□□□□ 0.38
RITA1-201ENST00000548278 IGHV3-43DP0DP04 118 aa17.42■□□□□ 0.38
RITA1-201ENST00000548278 EIF5AP63241 154 aaKnown RBP17.42■□□□□ 0.38
RITA1-201ENST00000548278 CCL8P80075 99 aa17.42■□□□□ 0.38
RITA1-201ENST00000548278 CLEC9AQ6UXN8 241 aa17.42■□□□□ 0.38
RITA1-201ENST00000548278 DMRTC2Q8IXT2 367 aaPredicted RBP17.42■□□□□ 0.38
RITA1-201ENST00000548278 LSM10Q969L4 123 aaKnown RBP17.42■□□□□ 0.38
RITA1-201ENST00000548278 ESRP2Q9H6T0 727 aaKnown RBP17.42■□□□□ 0.38
RITA1-201ENST00000548278 ATRXP46100 2492 aa17.42■□□□□ 0.38
RITA1-201ENST00000548278 ADGRG4Q8IZF6 3080 aa17.41■□□□□ 0.38
RITA1-201ENST00000548278 A0A1B0GU03 582 aa17.41■□□□□ 0.38
RITA1-201ENST00000548278 CCL21O00585 134 aa17.41■□□□□ 0.38
RITA1-201ENST00000548278 SELLP14151 372 aa17.41■□□□□ 0.38
RITA1-201ENST00000548278 ZNF16P17020 682 aaPredicted RBP17.41■□□□□ 0.38
RITA1-201ENST00000548278 FBXL19-AS1Q494R0 122 aa17.41■□□□□ 0.38
RITA1-201ENST00000548278 SMIM3Q9BZL3 60 aa17.41■□□□□ 0.38
RITA1-201ENST00000548278 NCOR1P1Q9H4R4 102 aa17.41■□□□□ 0.38
RITA1-201ENST00000548278 DCAF16Q9NXF7 216 aa17.41■□□□□ 0.38
RITA1-201ENST00000548278 USF3Q68DE3 2245 aa17.41■□□□□ 0.38
RITA1-201ENST00000548278 NCOR2Q9Y618 2525 aa17.41■□□□□ 0.38
RITA1-201ENST00000548278 A0A1B0GW55 424 aa17.41■□□□□ 0.38
RITA1-201ENST00000548278 DUX4L2P0CJ85 424 aa17.41■□□□□ 0.38
RITA1-201ENST00000548278 DUX4L3P0CJ86 424 aa17.41■□□□□ 0.38
RITA1-201ENST00000548278 DUX4L4P0CJ87 422 aa17.41■□□□□ 0.38
RITA1-201ENST00000548278 DUX4L5P0CJ88 424 aa17.41■□□□□ 0.38
RITA1-201ENST00000548278 DUX4L6P0CJ89 424 aa17.41■□□□□ 0.38
RITA1-201ENST00000548278 DUX4L7P0CJ90 424 aa17.41■□□□□ 0.38
RITA1-201ENST00000548278 ZCCHC24Q8N2G6 241 aaKnown RBP17.41■□□□□ 0.38
RITA1-201ENST00000548278 MAGT1Q9H0U3 335 aa17.41■□□□□ 0.38
RITA1-201ENST00000548278 DUX4Q9UBX2 424 aa17.41■□□□□ 0.38
RITA1-201ENST00000548278 RAI1Q7Z5J4 1906 aaPredicted RBP17.4■□□□□ 0.38
RITA1-201ENST00000548278 JTBO76095 146 aa17.4■□□□□ 0.38
RITA1-201ENST00000548278 IGKV1-5P01602 117 aa17.4■□□□□ 0.38
RITA1-201ENST00000548278 FAM157CP0CG43 387 aa17.4■□□□□ 0.38
RITA1-201ENST00000548278 TNFRSF1AP19438 455 aa17.4■□□□□ 0.38
RITA1-201ENST00000548278 TEX36Q5VZQ5 186 aa17.4■□□□□ 0.38
RITA1-201ENST00000548278 DUX4L9Q6RFH8 374 aaPredicted RBP17.4■□□□□ 0.38
RITA1-201ENST00000548278 ZNF808Q8N4W9 903 aaPredicted RBP17.4■□□□□ 0.38
RITA1-201ENST00000548278 DEFB108BQ8NET1 73 aa17.4■□□□□ 0.38
RITA1-201ENST00000548278 C14orf79Q96F83 325 aa17.4■□□□□ 0.38
RITA1-201ENST00000548278 GAFA1Q96PS6 74 aa17.4■□□□□ 0.38
RITA1-201ENST00000548278 AGMATQ9BSE5 352 aa17.4■□□□□ 0.38
RITA1-201ENST00000548278 DSCAML1Q8TD84 2053 aa17.4■□□□□ 0.38
RITA1-201ENST00000548278 VSTM5A8MXK1 200 aa17.4■□□□□ 0.38
RITA1-201ENST00000548278 DEFB108AA8MXU0 73 aa17.4■□□□□ 0.38
RITA1-201ENST00000548278 E7EQL1 145 aa17.4■□□□□ 0.38
RITA1-201ENST00000548278 SSSCA1O60232 199 aa17.4■□□□□ 0.38
RITA1-201ENST00000548278 FGF2P09038 288 aa17.4■□□□□ 0.38
RITA1-201ENST00000548278 IRF2P14316 349 aa17.4■□□□□ 0.38
RITA1-201ENST00000548278 EPHA1P21709 976 aa17.4■□□□□ 0.38
RITA1-201ENST00000548278 CHRNB4P30926 498 aa17.4■□□□□ 0.38
RITA1-201ENST00000548278 EDDM3BP56851 147 aa17.4■□□□□ 0.38
RITA1-201ENST00000548278 RPL30P62888 115 aaKnown RBP17.4■□□□□ 0.38
RITA1-201ENST00000548278 TLE1Q04724 770 aa17.4■□□□□ 0.38
RITA1-201ENST00000548278 Q6ZRM9 215 aa17.4■□□□□ 0.38
RITA1-201ENST00000548278 HSD17B13Q7Z5P4 300 aaPredicted RBP17.4■□□□□ 0.38
RITA1-201ENST00000548278 OR2C3Q8N628 320 aa17.4■□□□□ 0.38
RITA1-201ENST00000548278 LRRC20Q8TCA0 184 aa17.4■□□□□ 0.38
RITA1-201ENST00000548278 PLPPR2Q96GM1 343 aa17.4■□□□□ 0.38
RITA1-201ENST00000548278 WFDC1Q9HC57 220 aa17.4■□□□□ 0.38
RITA1-201ENST00000548278 CHD8Q9HCK8 2581 aa17.39■□□□□ 0.38
RITA1-201ENST00000548278 FAM90A27PA6NNH2 459 aa17.39■□□□□ 0.37
RITA1-201ENST00000548278 F2RL2O00254 374 aa17.39■□□□□ 0.37
RITA1-201ENST00000548278 CGB3P0DN86 165 aa17.39■□□□□ 0.37
RITA1-201ENST00000548278 CGB7P0DN87 165 aa17.39■□□□□ 0.37
RITA1-201ENST00000548278 MUC1P15941 1255 aaPredicted RBP17.39■□□□□ 0.37
RITA1-201ENST00000548278 PVALBP20472 110 aaPredicted RBP17.39■□□□□ 0.37
RITA1-201ENST00000548278 NHLH2Q02577 135 aa17.39■□□□□ 0.37
RITA1-201ENST00000548278 IZUMO4Q1ZYL8 232 aa17.39■□□□□ 0.37
RITA1-201ENST00000548278 EIF4E3Q8N5X7 224 aaKnown RBP17.39■□□□□ 0.37
RITA1-201ENST00000548278 RNF141Q8WVD5 230 aa17.39■□□□□ 0.37
RITA1-201ENST00000548278 OR6C3Q9NZP0 311 aa17.39■□□□□ 0.37
RITA1-201ENST00000548278 RNF115Q9Y4L5 304 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms