RNA–Protein interactions for RNA: ENST00000547853.1

CDK4-205, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-205ENST00000547853 HIKESHIQ53FT3 197 aa8.3□□□□□ -1.08
CDK4-205ENST00000547853 RNF144BQ7Z419 303 aa8.3□□□□□ -1.08
CDK4-205ENST00000547853 RTN4RL2Q86UN3 420 aa8.3□□□□□ -1.08
CDK4-205ENST00000547853 OR2C3Q8N628 320 aa8.3□□□□□ -1.08
CDK4-205ENST00000547853 ZNF565Q8N9K5 539 aa8.3□□□□□ -1.08
CDK4-205ENST00000547853 WDSUB1Q8N9V3 476 aa8.3□□□□□ -1.08
CDK4-205ENST00000547853 Q8NFD4 153 aa8.3□□□□□ -1.08
CDK4-205ENST00000547853 OR13D1Q8NGV5 346 aa8.3□□□□□ -1.08
CDK4-205ENST00000547853 OR1F12Q8NHA8 337 aa8.3□□□□□ -1.08
CDK4-205ENST00000547853 C2CD4CQ8TF44 421 aa8.3□□□□□ -1.08
CDK4-205ENST00000547853 TOMM40LQ969M1 308 aa8.3□□□□□ -1.08
CDK4-205ENST00000547853 ERGIC1Q969X5 290 aa8.3□□□□□ -1.08
CDK4-205ENST00000547853 SGK3Q96BR1 496 aa8.3□□□□□ -1.08
CDK4-205ENST00000547853 REEP6Q96HR9 211 aa8.3□□□□□ -1.08
CDK4-205ENST00000547853 BOD1Q96IK1 185 aa8.3□□□□□ -1.08
CDK4-205ENST00000547853 TMEM56Q96MV1 263 aa8.3□□□□□ -1.08
CDK4-205ENST00000547853 PAPOLGQ9BWT3 736 aaKnown RBP8.3□□□□□ -1.08
CDK4-205ENST00000547853 SCRT1Q9BWW7 348 aa8.3□□□□□ -1.08
CDK4-205ENST00000547853 RIMS4Q9H426 269 aaPredicted RBP8.3□□□□□ -1.08
CDK4-205ENST00000547853 PRR13Q9NZ81 148 aa8.3□□□□□ -1.08
CDK4-205ENST00000547853 RNF150Q9ULK6 438 aa8.3□□□□□ -1.08
CDK4-205ENST00000547853 TMEM56-RWDD3S4R434 201 aa8.3□□□□□ -1.08
CDK4-205ENST00000547853 IGHV4-30-2A0A087WSY4 118 aa8.29□□□□□ -1.08
CDK4-205ENST00000547853 ZNF816-ZNF321PA0A0X1KG74 233 aa8.29□□□□□ -1.08
CDK4-205ENST00000547853 KIR2DS1A0A191URI9 304 aa8.29□□□□□ -1.08
CDK4-205ENST00000547853 ZNF814B7Z6K7 855 aa8.29□□□□□ -1.08
CDK4-205ENST00000547853 TRDCB7Z8K6 153 aa8.29□□□□□ -1.08
CDK4-205ENST00000547853 C9JQL5 133 aa8.29□□□□□ -1.08
CDK4-205ENST00000547853 C16orf97H3BN30 126 aa8.29□□□□□ -1.08
CDK4-205ENST00000547853 GATCO43716 136 aaKnown RBP8.29□□□□□ -1.08
CDK4-205ENST00000547853 SYNGR3O43761 229 aa8.29□□□□□ -1.08
CDK4-205ENST00000547853 NDUFS6O75380 124 aaKnown RBP8.29□□□□□ -1.08
CDK4-205ENST00000547853 CBR3O75828 277 aa8.29□□□□□ -1.08
CDK4-205ENST00000547853 NRASP01111 189 aa8.29□□□□□ -1.08
CDK4-205ENST00000547853 SOD3P08294 240 aa8.29□□□□□ -1.08
CDK4-205ENST00000547853 SLC25A6P12236 298 aa8.29□□□□□ -1.08
CDK4-205ENST00000547853 ZNF16P17020 682 aaPredicted RBP8.29□□□□□ -1.08
CDK4-205ENST00000547853 FUT3P21217 361 aa8.29□□□□□ -1.08
CDK4-205ENST00000547853 ACKR3P25106 362 aa8.29□□□□□ -1.08
CDK4-205ENST00000547853 CDKN1AP38936 164 aa8.29□□□□□ -1.08
CDK4-205ENST00000547853 KIR2DS4P43632 304 aa8.29□□□□□ -1.08
CDK4-205ENST00000547853 NKX2-1P43699 371 aaPredicted RBP8.29□□□□□ -1.08
CDK4-205ENST00000547853 RAC3P60763 192 aa8.29□□□□□ -1.08
CDK4-205ENST00000547853 VAMP2P63027 116 aa8.29□□□□□ -1.08
CDK4-205ENST00000547853 EWSR1Q01844 656 aaKnown RBP eCLIP8.29□□□□□ -1.08
CDK4-205ENST00000547853 KIR2DS1Q14954 304 aa8.29□□□□□ -1.08
CDK4-205ENST00000547853 KRBOX4Q5JUW0 171 aa8.29□□□□□ -1.08
CDK4-205ENST00000547853 SLC22A25Q6T423 547 aa8.29□□□□□ -1.08
CDK4-205ENST00000547853 DPPA2Q7Z7J5 298 aa8.29□□□□□ -1.08
CDK4-205ENST00000547853 LINC00596Q86U02 117 aa8.29□□□□□ -1.08
CDK4-205ENST00000547853 YRDCQ86U90 279 aaKnown RBP8.29□□□□□ -1.08
CDK4-205ENST00000547853 NPRL2Q8WTW4 380 aa8.29□□□□□ -1.08
CDK4-205ENST00000547853 HPSE2Q8WWQ2 592 aa8.29□□□□□ -1.08
CDK4-205ENST00000547853 MAFIPQ8WZ33 124 aa8.29□□□□□ -1.08
CDK4-205ENST00000547853 GTF3AQ92664 365 aaKnown RBP8.29□□□□□ -1.08
CDK4-205ENST00000547853 SMIM3Q9BZL3 60 aa8.29□□□□□ -1.08
CDK4-205ENST00000547853 TMEM222Q9H0R3 208 aa8.29□□□□□ -1.08
CDK4-205ENST00000547853 C11orf1Q9H5F2 150 aa8.29□□□□□ -1.08
CDK4-205ENST00000547853 OPA3Q9H6K4 179 aa8.29□□□□□ -1.08
CDK4-205ENST00000547853 GPR173Q9NS66 373 aa8.29□□□□□ -1.08
CDK4-205ENST00000547853 ELOVL5Q9NYP7 299 aa8.29□□□□□ -1.08
CDK4-205ENST00000547853 DKKL1Q9UK85 242 aa8.29□□□□□ -1.08
CDK4-205ENST00000547853 RCL1Q9Y2P8 373 aaKnown RBP8.29□□□□□ -1.08
CDK4-205ENST00000547853 IGKV1D-8A0A087WSZ0 117 aa8.28□□□□□ -1.08
CDK4-205ENST00000547853 TRAV1-1A0A0B4J248 108 aa8.28□□□□□ -1.08
CDK4-205ENST00000547853 C3orf85A0A1B0GTC6 90 aa8.28□□□□□ -1.08
CDK4-205ENST00000547853 RBFOX3A6NFN3 312 aa8.28□□□□□ -1.08
CDK4-205ENST00000547853 MPPED1O15442 326 aa8.28□□□□□ -1.08
CDK4-205ENST00000547853 NDUFS7O75251 213 aa8.28□□□□□ -1.08
CDK4-205ENST00000547853 CGAP01215 116 aa8.28□□□□□ -1.08
CDK4-205ENST00000547853 PPYP01298 95 aa8.28□□□□□ -1.08
CDK4-205ENST00000547853 TK1P04183 234 aa8.28□□□□□ -1.08
CDK4-205ENST00000547853 SRD5A1P18405 259 aa8.28□□□□□ -1.08
CDK4-205ENST00000547853 LHX2P50458 406 aa8.28□□□□□ -1.08
CDK4-205ENST00000547853 GFRA1P56159 465 aa8.28□□□□□ -1.08
CDK4-205ENST00000547853 CLDN18P56856 261 aa8.28□□□□□ -1.08
CDK4-205ENST00000547853 RBM11P57052 281 aaKnown RBP8.28□□□□□ -1.08
CDK4-205ENST00000547853 SRYQ05066 204 aa8.28□□□□□ -1.08
CDK4-205ENST00000547853 FABP9Q0Z7S8 132 aa8.28□□□□□ -1.08
CDK4-205ENST00000547853 PNRC1Q12796 327 aaPredicted RBP8.28□□□□□ -1.08
CDK4-205ENST00000547853 IL24Q13007 206 aa8.28□□□□□ -1.08
CDK4-205ENST00000547853 TAF9Q16594 264 aa8.28□□□□□ -1.08
CDK4-205ENST00000547853 MPV17LQ2QL34 196 aa8.28□□□□□ -1.08
CDK4-205ENST00000547853 KHDC3LQ587J8 217 aa8.28□□□□□ -1.08
CDK4-205ENST00000547853 ZNF506Q5JVG8 444 aa8.28□□□□□ -1.08
CDK4-205ENST00000547853 RAET1LQ5VY80 246 aa8.28□□□□□ -1.08
CDK4-205ENST00000547853 LYZL2Q7Z4W2 148 aa8.28□□□□□ -1.08
CDK4-205ENST00000547853 SLC35E3Q7Z769 313 aa8.28□□□□□ -1.08
CDK4-205ENST00000547853 ZNF695Q8IW36 515 aa8.28□□□□□ -1.08
CDK4-205ENST00000547853 ZFP82Q8N141 532 aa8.28□□□□□ -1.08
CDK4-205ENST00000547853 FBXL14Q8N1E6 418 aa8.28□□□□□ -1.08
CDK4-205ENST00000547853 CNEP1R1Q8N9A8 125 aa8.28□□□□□ -1.08
CDK4-205ENST00000547853 FAM213BQ8TBF2 198 aa8.28□□□□□ -1.08
CDK4-205ENST00000547853 CD300LFQ8TDQ1 290 aa8.28□□□□□ -1.08
CDK4-205ENST00000547853 FAAP24Q9BTP7 215 aa8.28□□□□□ -1.08
CDK4-205ENST00000547853 PLK3Q9H4B4 646 aa8.28□□□□□ -1.08
CDK4-205ENST00000547853 LYRM2Q9NU23 88 aaPredicted RBP8.28□□□□□ -1.08
CDK4-205ENST00000547853 TMEM38BQ9NVV0 291 aa8.28□□□□□ -1.08
CDK4-205ENST00000547853 PARPBPQ9NWS1 579 aa8.28□□□□□ -1.08
CDK4-205ENST00000547853 PLA2G2EQ9NZK7 142 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms