RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 ZNF253O75346 499 aa10.83□□□□□ -0.68
COL4A6-209ENST00000545689 OR5AL1P0C617 328 aa10.83□□□□□ -0.68
COL4A6-209ENST00000545689 FAM157CP0CG43 387 aa10.83□□□□□ -0.68
COL4A6-209ENST00000545689 TUSC1Q2TAM9 212 aa10.83□□□□□ -0.68
COL4A6-209ENST00000545689 NCMAPQ5T1S8 102 aa10.83□□□□□ -0.68
COL4A6-209ENST00000545689 SLC25A10Q9UBX3 287 aaPredicted RBP10.83□□□□□ -0.68
COL4A6-209ENST00000545689 OR2H2O95918 312 aa10.83□□□□□ -0.68
COL4A6-209ENST00000545689 PPP1CCP36873 323 aaKnown RBP10.83□□□□□ -0.68
COL4A6-209ENST00000545689 SLC16A13Q7RTY0 426 aa10.83□□□□□ -0.68
COL4A6-209ENST00000545689 EIF4E3Q8N5X7 224 aaKnown RBP10.83□□□□□ -0.68
COL4A6-209ENST00000545689 LSM10Q969L4 123 aaKnown RBP10.83□□□□□ -0.68
COL4A6-209ENST00000545689 IL19Q9UHD0 177 aa10.83□□□□□ -0.68
COL4A6-209ENST00000545689 PPIAL4EA0A075B759 164 aa10.83□□□□□ -0.68
COL4A6-209ENST00000545689 PATE3B3GLJ2 98 aa10.83□□□□□ -0.68
COL4A6-209ENST00000545689 PPIAL4DF5H284 164 aa10.83□□□□□ -0.68
COL4A6-209ENST00000545689 SPINK4O60575 86 aa10.83□□□□□ -0.68
COL4A6-209ENST00000545689 SEMA7AO75326 666 aa10.83□□□□□ -0.68
COL4A6-209ENST00000545689 HBZP02008 142 aa10.83□□□□□ -0.68
COL4A6-209ENST00000545689 PPIAL4FP0DN26 164 aa10.83□□□□□ -0.68
COL4A6-209ENST00000545689 IGSF11Q5DX21 431 aa10.83□□□□□ -0.68
COL4A6-209ENST00000545689 LYRM7Q5U5X0 104 aa10.83□□□□□ -0.68
COL4A6-209ENST00000545689 NSUN5P2Q63ZY6 315 aa10.83□□□□□ -0.68
COL4A6-209ENST00000545689 SELENOHQ8IZQ5 122 aaKnown RBP10.83□□□□□ -0.68
COL4A6-209ENST00000545689 OR5AU1Q8NGC0 362 aa10.83□□□□□ -0.68
COL4A6-209ENST00000545689 WNT2BQ93097 391 aa10.83□□□□□ -0.68
COL4A6-209ENST00000545689 ASCL3Q9NQ33 180 aa10.83□□□□□ -0.68
COL4A6-209ENST00000545689 PPIAL4AQ9Y536 164 aa10.83□□□□□ -0.68
COL4A6-209ENST00000545689 RPS11P62280 158 aaKnown RBP eCLIP10.82□□□□□ -0.68
COL4A6-209ENST00000545689 PCOLCEQ15113 449 aa10.82□□□□□ -0.68
COL4A6-209ENST00000545689 SPRED2Q7Z698 418 aa10.82□□□□□ -0.68
COL4A6-209ENST00000545689 OR4C5Q8NGB2 326 aa10.82□□□□□ -0.68
COL4A6-209ENST00000545689 TMEM45BQ96B21 275 aa10.82□□□□□ -0.68
COL4A6-209ENST00000545689 INSIG2Q9Y5U4 225 aa10.82□□□□□ -0.68
COL4A6-209ENST00000545689 PGLYRP1O75594 196 aaPredicted RBP10.82□□□□□ -0.68
COL4A6-209ENST00000545689 IFITM2Q01629 132 aa10.82□□□□□ -0.68
COL4A6-209ENST00000545689 NHLRC3Q5JS37 347 aa10.82□□□□□ -0.68
COL4A6-209ENST00000545689 LINC00470Q9BZP3 86 aa10.82□□□□□ -0.68
COL4A6-209ENST00000545689 PATJQ8NI35 1801 aa10.82□□□□□ -0.68
COL4A6-209ENST00000545689 PKIAP61925 76 aa10.82□□□□□ -0.68
COL4A6-209ENST00000545689 GTF2H5Q6ZYL4 71 aa10.82□□□□□ -0.68
COL4A6-209ENST00000545689 CLN8Q9UBY8 286 aa10.82□□□□□ -0.68
COL4A6-209ENST00000545689 CORTO00230 105 aa10.82□□□□□ -0.68
COL4A6-209ENST00000545689 MC5RP33032 325 aa10.82□□□□□ -0.68
COL4A6-209ENST00000545689 EGR4Q05215 589 aa10.82□□□□□ -0.68
COL4A6-209ENST00000545689 MS4A7Q9GZW8 240 aaPredicted RBP10.82□□□□□ -0.68
COL4A6-209ENST00000545689 HS3ST3B1Q9Y662 390 aa10.82□□□□□ -0.68
COL4A6-209ENST00000545689 NPIPB9F8W1W9 429 aa10.82□□□□□ -0.68
COL4A6-209ENST00000545689 OR2J3O76001 311 aa10.82□□□□□ -0.68
COL4A6-209ENST00000545689 ZNF205O95201 554 aa10.82□□□□□ -0.68
COL4A6-209ENST00000545689 LYPD8Q6UX82 237 aa10.82□□□□□ -0.68
COL4A6-209ENST00000545689 C16orf82Q7Z2V1 217 aa10.82□□□□□ -0.68
COL4A6-209ENST00000545689 SH2D7A6NKC9 451 aaPredicted RBP10.81□□□□□ -0.68
COL4A6-209ENST00000545689 IGLV3-19P01714 112 aa10.81□□□□□ -0.68
COL4A6-209ENST00000545689 MT-ND6P03923 174 aa10.81□□□□□ -0.68
COL4A6-209ENST00000545689 UCNP55089 124 aa10.81□□□□□ -0.68
COL4A6-209ENST00000545689 PAFAH1B2P68402 229 aa10.81□□□□□ -0.68
COL4A6-209ENST00000545689 RGP1Q92546 391 aaPredicted RBP10.81□□□□□ -0.68
COL4A6-209ENST00000545689 MAP1LC3CQ9BXW4 147 aa10.81□□□□□ -0.68
COL4A6-209ENST00000545689 FUT9Q9Y231 359 aa10.81□□□□□ -0.68
COL4A6-209ENST00000545689 CXorf65A6NEN9 183 aa10.81□□□□□ -0.68
COL4A6-209ENST00000545689 ZNF273Q14593 569 aa10.81□□□□□ -0.68
COL4A6-209ENST00000545689 OR8G5Q8NG78 346 aa10.81□□□□□ -0.68
COL4A6-209ENST00000545689 OR5R1Q8NH85 324 aa10.81□□□□□ -0.68
COL4A6-209ENST00000545689 ZNF714Q96N38 554 aa10.81□□□□□ -0.68
COL4A6-209ENST00000545689 C5orf66Q9H5L9 145 aa10.81□□□□□ -0.68
COL4A6-209ENST00000545689 COA4Q9NYJ1 87 aa10.81□□□□□ -0.68
COL4A6-209ENST00000545689 ZDHHC8Q9ULC8 765 aa10.81□□□□□ -0.68
COL4A6-209ENST00000545689 ARID1BQ8NFD5 2236 aaPredicted RBP10.81□□□□□ -0.68
COL4A6-209ENST00000545689 APCSP02743 223 aa10.81□□□□□ -0.68
COL4A6-209ENST00000545689 CAMPP49913 170 aa10.81□□□□□ -0.68
COL4A6-209ENST00000545689 SELENOTP62341 195 aa10.81□□□□□ -0.68
COL4A6-209ENST00000545689 LINC00114Q6XXX2 140 aa10.81□□□□□ -0.68
COL4A6-209ENST00000545689 ZNF441Q8N8Z8 693 aa10.81□□□□□ -0.68
COL4A6-209ENST00000545689 OR2V2Q96R30 315 aa10.81□□□□□ -0.68
COL4A6-209ENST00000545689 SDHCQ99643 169 aaPredicted RBP10.81□□□□□ -0.68
COL4A6-209ENST00000545689 GP6Q9HCN6 339 aa10.81□□□□□ -0.68
COL4A6-209ENST00000545689 HSPB8Q9UJY1 196 aa10.81□□□□□ -0.68
COL4A6-209ENST00000545689 MEX3AA1L020 520 aaKnown RBP10.81□□□□□ -0.68
COL4A6-209ENST00000545689 F2RL2O00254 374 aa10.81□□□□□ -0.68
COL4A6-209ENST00000545689 IGHV3-13P01766 116 aa10.81□□□□□ -0.68
COL4A6-209ENST00000545689 IGHV3-7P01780 117 aa10.81□□□□□ -0.68
COL4A6-209ENST00000545689 THY1P04216 161 aa10.81□□□□□ -0.68
COL4A6-209ENST00000545689 SUCLG1P53597 346 aaKnown RBP10.81□□□□□ -0.68
COL4A6-209ENST00000545689 ZNF343Q6P1L6 599 aa10.81□□□□□ -0.68
COL4A6-209ENST00000545689 ZNF488Q96MN9 340 aa10.81□□□□□ -0.68
COL4A6-209ENST00000545689 CISD1Q9NZ45 108 aaKnown RBP10.81□□□□□ -0.68
COL4A6-209ENST00000545689 LTBP1Q14766 1721 aa10.81□□□□□ -0.68
COL4A6-209ENST00000545689 WDR90Q96KV7 1748 aa10.81□□□□□ -0.68
COL4A6-209ENST00000545689 A0A0G2JMZ2 1700 aa10.81□□□□□ -0.68
COL4A6-209ENST00000545689 LRRC37A2A6NM11 1700 aa10.81□□□□□ -0.68
COL4A6-209ENST00000545689 ERVH48-1M5A8F1 160 aa10.81□□□□□ -0.68
COL4A6-209ENST00000545689 CLDN14O95500 239 aa10.81□□□□□ -0.68
COL4A6-209ENST00000545689 COL8A1P27658 744 aa10.81□□□□□ -0.68
COL4A6-209ENST00000545689 RPL13AP40429 203 aaKnown RBP10.81□□□□□ -0.68
COL4A6-209ENST00000545689 ZNF596Q8TC21 504 aa10.81□□□□□ -0.68
COL4A6-209ENST00000545689 PRO1933Q9H354 126 aa10.81□□□□□ -0.68
COL4A6-209ENST00000545689 MSL2Q9HCI7 577 aa10.81□□□□□ -0.68
COL4A6-209ENST00000545689 LMX1BO60663 402 aa10.8□□□□□ -0.68
COL4A6-209ENST00000545689 FAM87AP0C7U9 286 aa10.8□□□□□ -0.68
COL4A6-209ENST00000545689 KCNMB1Q16558 191 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms