RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 MORN2Q502X0 79 aa4.49□□□□□ -1.69
CLSTN3-215ENST00000544584 FBLN7Q53RD9 439 aa4.49□□□□□ -1.69
CLSTN3-215ENST00000544584 CXorf66Q5JRM2 361 aaPredicted RBP4.49□□□□□ -1.69
CLSTN3-215ENST00000544584 KHDC1LQ5JSQ8 128 aa4.49□□□□□ -1.69
CLSTN3-215ENST00000544584 TEX38Q6PEX7 206 aa4.49□□□□□ -1.69
CLSTN3-215ENST00000544584 TMEM65Q6PI78 240 aa4.49□□□□□ -1.69
CLSTN3-215ENST00000544584 ZNF773Q6PK81 442 aa4.49□□□□□ -1.69
CLSTN3-215ENST00000544584 REC114Q7Z4M0 266 aa4.49□□□□□ -1.69
CLSTN3-215ENST00000544584 SLC35E3Q7Z769 313 aa4.49□□□□□ -1.69
CLSTN3-215ENST00000544584 DYNAPQ8N1N2 210 aa4.49□□□□□ -1.69
CLSTN3-215ENST00000544584 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.49□□□□□ -1.69
CLSTN3-215ENST00000544584 TMEM104Q8NE00 496 aa4.49□□□□□ -1.69
CLSTN3-215ENST00000544584 OR4A4PQ8NGN8 299 aa4.49□□□□□ -1.69
CLSTN3-215ENST00000544584 OR56B4Q8NH76 319 aa4.49□□□□□ -1.69
CLSTN3-215ENST00000544584 OR10J5Q8NHC4 309 aa4.49□□□□□ -1.69
CLSTN3-215ENST00000544584 FAM110DQ8TAY7 271 aaPredicted RBP4.49□□□□□ -1.69
CLSTN3-215ENST00000544584 PIFOQ8TCI5 191 aa4.49□□□□□ -1.69
CLSTN3-215ENST00000544584 RTN4IP1Q8WWV3 396 aaPredicted RBP4.49□□□□□ -1.69
CLSTN3-215ENST00000544584 CFHR4Q92496 578 aa4.49□□□□□ -1.69
CLSTN3-215ENST00000544584 ORAI1Q96D31 301 aa4.49□□□□□ -1.69
CLSTN3-215ENST00000544584 R3HDM4Q96D70 268 aa4.49□□□□□ -1.69
CLSTN3-215ENST00000544584 GINS4Q9BRT9 223 aa4.49□□□□□ -1.69
CLSTN3-215ENST00000544584 MCRIP2Q9BUT9 160 aaKnown RBP4.49□□□□□ -1.69
CLSTN3-215ENST00000544584 ZNF702PQ9H963 129 aa4.49□□□□□ -1.69
CLSTN3-215ENST00000544584 LIN7CQ9NUP9 197 aaKnown RBP4.49□□□□□ -1.69
CLSTN3-215ENST00000544584 SLC23A1Q9UHI7 598 aa4.49□□□□□ -1.69
CLSTN3-215ENST00000544584 RNF150Q9ULK6 438 aa4.49□□□□□ -1.69
CLSTN3-215ENST00000544584 AK6Q9Y3D8 172 aaKnown RBP4.49□□□□□ -1.69
CLSTN3-215ENST00000544584 A0A0A6YYH2 397 aa4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 IGHV3-43A0A0B4J1X8 118 aa4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 A0A1W2PP11 408 aa4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 OR5H14A6NHG9 310 aa4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 A6NJ64 397 aa4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 TRDCB7Z8K6 153 aa4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 CHST1O43916 411 aa4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 CREBL2O60519 120 aaPredicted RBP4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 IGHV3-7P01780 117 aa4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 GSTP1P09211 210 aaKnown RBP4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 IGHV3-43DP0DP04 118 aa4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 RRASP10301 218 aa4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 RCC1P18754 421 aaPredicted RBP4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 CD33P20138 364 aa4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 CEACAM6P40199 344 aa4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 MAP2K4P45985 399 aa4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 GPR12P47775 334 aa4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 ARPC4P59998 168 aa4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 BLCAPP62952 87 aa4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 FABP5Q01469 135 aa4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 ARFRP1Q13795 201 aa4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 EBI3Q14213 229 aa4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 HABP2Q14520 560 aaPredicted RBP4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 HNF4GQ14541 408 aa4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 MMDQ15546 238 aa4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 HMGN3Q15651 99 aa4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 SRSF7Q16629 238 aaKnown RBP eCLIP4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 PNLIPRP3Q17RR3 467 aa4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 NSUN5P1Q3KNT7 163 aa4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 FAM27D1Q5T7N8 215 aa4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 CD200R1LQ6Q8B3 271 aa4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 CCBE1Q6UXH8 406 aaPredicted RBP4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 TMEM91Q6ZNR0 172 aa4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 RNF144BQ7Z419 303 aa4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 C6orf201Q7Z4U5 140 aa4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 SPARTQ8N0X7 666 aa4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 FAM89BQ8N5H3 189 aa4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 OR10V1Q8NGI7 309 aa4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 OR10R2Q8NGX6 335 aa4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 OR1L1Q8NH94 360 aa4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 MRPL30Q8TCC3 161 aaKnown RBP4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 LEAP2Q969E1 77 aa4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 BORCS5Q969J3 196 aa4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 ADTRPQ96IZ2 230 aa4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 AIFM2Q9BRQ8 373 aa4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 FAAP24Q9BTP7 215 aa4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 ATG5Q9H1Y0 275 aa4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 DCSTAMPQ9H295 470 aa4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 DIABLOQ9NR28 239 aa4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 RRP15Q9Y3B9 282 aaKnown RBP4.48□□□□□ -1.69
CLSTN3-215ENST00000544584 TET2Q6N021 2002 aaPredicted RBP4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 TRAV39A0A0B4J263 110 aa4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 SMIM31A0A1B0GVY4 71 aa4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 A0A1W2PPE3 182 aa4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 A0A1W2PPI3 338 aa4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 NUDT19A8MXV4 375 aa4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 H7C2Y5 167 aa4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 NBR2O15453 112 aa4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 NAPSAO96009 420 aa4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 IGHG2P01859 326 aa4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 ELANEP08246 267 aa4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 DTYMKP23919 212 aa4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 CD24P25063 80 aa4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 PPP1CCP36873 323 aaKnown RBP4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 GDNFP39905 211 aa4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 CBX5P45973 191 aa4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 GNG2P59768 71 aa4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 HLA-DRB3P79483 266 aa4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 UNC119Q13432 240 aa4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 RTL8BQ17RB0 113 aa4.47□□□□□ -1.69
CLSTN3-215ENST00000544584 CT45A1Q5HYN5 189 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms