RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 ARHGAP32A7KAX9 2087 aa15.46■□□□□ 0.07
TNFRSF1A-213ENST00000540022 NAP1L6A6NFF2 107 aa15.46■□□□□ 0.07
TNFRSF1A-213ENST00000540022 CENPXA8MT69 81 aa15.46■□□□□ 0.07
TNFRSF1A-213ENST00000540022 DISC1C4P0D8 188 aa15.46■□□□□ 0.07
TNFRSF1A-213ENST00000540022 TUSC2O75896 110 aa15.46■□□□□ 0.07
TNFRSF1A-213ENST00000540022 TOX4O94842 621 aa15.46■□□□□ 0.07
TNFRSF1A-213ENST00000540022 ZNF16P17020 682 aaPredicted RBP15.46■□□□□ 0.07
TNFRSF1A-213ENST00000540022 PRTN3P24158 256 aa15.46■□□□□ 0.07
TNFRSF1A-213ENST00000540022 VMO1Q7Z5L0 202 aa15.46■□□□□ 0.07
TNFRSF1A-213ENST00000540022 GLCCI1Q86VQ1 547 aa15.46■□□□□ 0.07
TNFRSF1A-213ENST00000540022 POC5Q8NA72 575 aa15.46■□□□□ 0.07
TNFRSF1A-213ENST00000540022 TNFRSF14Q92956 283 aa15.46■□□□□ 0.07
TNFRSF1A-213ENST00000540022 TBX15Q96SF7 602 aa15.46■□□□□ 0.07
TNFRSF1A-213ENST00000540022 PCGF1Q9BSM1 259 aa15.46■□□□□ 0.07
TNFRSF1A-213ENST00000540022 TMEM133Q9H2Q1 129 aa15.46■□□□□ 0.07
TNFRSF1A-213ENST00000540022 DSCAML1Q8TD84 2053 aa15.46■□□□□ 0.07
TNFRSF1A-213ENST00000540022 KIAA2026Q5HYC2 2103 aa15.46■□□□□ 0.06
TNFRSF1A-213ENST00000540022 A0A087X0M5 115 aa15.45■□□□□ 0.06
TNFRSF1A-213ENST00000540022 A0A1B0GX30 115 aa15.45■□□□□ 0.06
TNFRSF1A-213ENST00000540022 AADACP22760 399 aa15.45■□□□□ 0.06
TNFRSF1A-213ENST00000540022 SCGB2B2Q4G0G5 96 aa15.45■□□□□ 0.06
TNFRSF1A-213ENST00000540022 CYB5R2Q6BCY4 276 aa15.45■□□□□ 0.06
TNFRSF1A-213ENST00000540022 LHFPL1Q86WI0 220 aa15.45■□□□□ 0.06
TNFRSF1A-213ENST00000540022 TMEM17Q86X19 198 aa15.45■□□□□ 0.06
TNFRSF1A-213ENST00000540022 UNKLQ9H9P5 680 aaKnown RBP15.45■□□□□ 0.06
TNFRSF1A-213ENST00000540022 SLC2A8Q9NY64 477 aa15.45■□□□□ 0.06
TNFRSF1A-213ENST00000540022 PSG11Q9UQ72 335 aa15.45■□□□□ 0.06
TNFRSF1A-213ENST00000540022 JMJD1CQ15652 2540 aa15.45■□□□□ 0.06
TNFRSF1A-213ENST00000540022 OR5H14A6NHG9 310 aa15.44■□□□□ 0.06
TNFRSF1A-213ENST00000540022 SLC31A2O15432 143 aa15.44■□□□□ 0.06
TNFRSF1A-213ENST00000540022 PPYP01298 95 aa15.44■□□□□ 0.06
TNFRSF1A-213ENST00000540022 GATA3P23771 443 aa15.44■□□□□ 0.06
TNFRSF1A-213ENST00000540022 GNG10P50151 68 aa15.44■□□□□ 0.06
TNFRSF1A-213ENST00000540022 CCR6P51684 374 aa15.44■□□□□ 0.06
TNFRSF1A-213ENST00000540022 ZNF134P52741 427 aa15.44■□□□□ 0.06
TNFRSF1A-213ENST00000540022 DEFA1P59665 94 aa15.44■□□□□ 0.06
TNFRSF1A-213ENST00000540022 DEFA3P59666 94 aa15.44■□□□□ 0.06
TNFRSF1A-213ENST00000540022 AADACL3Q5VUY0 350 aa15.44■□□□□ 0.06
TNFRSF1A-213ENST00000540022 FAHD2BQ6P2I3 314 aaPredicted RBP15.44■□□□□ 0.06
TNFRSF1A-213ENST00000540022 LDLRAD3Q86YD5 345 aa15.44■□□□□ 0.06
TNFRSF1A-213ENST00000540022 ZNF439Q8NDP4 499 aa15.44■□□□□ 0.06
TNFRSF1A-213ENST00000540022 MRGPRFQ96AM1 343 aa15.44■□□□□ 0.06
TNFRSF1A-213ENST00000540022 FAHD2AQ96GK7 314 aa15.44■□□□□ 0.06
TNFRSF1A-213ENST00000540022 OR2W1Q9Y3N9 320 aa15.44■□□□□ 0.06
TNFRSF1A-213ENST00000540022 IGKV1D-13A0A0B4J2D9 117 aa15.43■□□□□ 0.06
TNFRSF1A-213ENST00000540022 A0A1W2PPE3 182 aa15.43■□□□□ 0.06
TNFRSF1A-213ENST00000540022 RGS11O94810 467 aa15.43■□□□□ 0.06
TNFRSF1A-213ENST00000540022 IGKV1-13P0DP09 117 aa15.43■□□□□ 0.06
TNFRSF1A-213ENST00000540022 COX7A1P24310 79 aa15.43■□□□□ 0.06
TNFRSF1A-213ENST00000540022 CD34P28906 385 aa15.43■□□□□ 0.06
TNFRSF1A-213ENST00000540022 KLRD1Q13241 179 aa15.43■□□□□ 0.06
TNFRSF1A-213ENST00000540022 CT45A1Q5HYN5 189 aa15.43■□□□□ 0.06
TNFRSF1A-213ENST00000540022 HCP5Q6MZN7 132 aa15.43■□□□□ 0.06
TNFRSF1A-213ENST00000540022 IDO2Q6ZQW0 420 aa15.43■□□□□ 0.06
TNFRSF1A-213ENST00000540022 ABHD12Q8N2K0 398 aa15.43■□□□□ 0.06
TNFRSF1A-213ENST00000540022 OR13C8Q8NGS7 320 aa15.43■□□□□ 0.06
TNFRSF1A-213ENST00000540022 TERB2Q8NHR7 220 aa15.43■□□□□ 0.06
TNFRSF1A-213ENST00000540022 CT45A3Q8NHU0 189 aa15.43■□□□□ 0.06
TNFRSF1A-213ENST00000540022 ZFAND2BQ8WV99 257 aa15.43■□□□□ 0.06
TNFRSF1A-213ENST00000540022 PRRT1Q99946 306 aa15.43■□□□□ 0.06
TNFRSF1A-213ENST00000540022 C7orf69Q9H7B7 122 aa15.43■□□□□ 0.06
TNFRSF1A-213ENST00000540022 ZNRD1Q9P1U0 126 aa15.43■□□□□ 0.06
TNFRSF1A-213ENST00000540022 SCP2D1Q9UJQ7 156 aa15.43■□□□□ 0.06
TNFRSF1A-213ENST00000540022 AUP1Q9Y679 476 aa15.43■□□□□ 0.06
TNFRSF1A-213ENST00000540022 DOCK11Q5JSL3 2073 aa15.43■□□□□ 0.06
TNFRSF1A-213ENST00000540022 IGHV2-26A0A0B4J1V2 119 aa15.43■□□□□ 0.06
TNFRSF1A-213ENST00000540022 OR8U9P0C7N5 309 aa15.43■□□□□ 0.06
TNFRSF1A-213ENST00000540022 FXYD4P59646 89 aa15.43■□□□□ 0.06
TNFRSF1A-213ENST00000540022 Q3ZCU0 254 aa15.43■□□□□ 0.06
TNFRSF1A-213ENST00000540022 LY6G6FQ5SQ64 297 aa15.43■□□□□ 0.06
TNFRSF1A-213ENST00000540022 MZT2BQ6NZ67 158 aa15.43■□□□□ 0.06
TNFRSF1A-213ENST00000540022 OR8U1Q8NH10 309 aa15.43■□□□□ 0.06
TNFRSF1A-213ENST00000540022 MOB3AQ96BX8 217 aa15.43■□□□□ 0.06
TNFRSF1A-213ENST00000540022 AGMATQ9BSE5 352 aa15.43■□□□□ 0.06
TNFRSF1A-213ENST00000540022 FXYD6Q9H0Q3 95 aa15.43■□□□□ 0.06
TNFRSF1A-213ENST00000540022 HEXA-AS1Q9H8Q6 139 aa15.43■□□□□ 0.06
TNFRSF1A-213ENST00000540022 RNASEK-C17orf49H0YIS7 233 aa15.42■□□□□ 0.06
TNFRSF1A-213ENST00000540022 ST8SIA5O15466 376 aa15.42■□□□□ 0.06
TNFRSF1A-213ENST00000540022 AVPP01185 164 aa15.42■□□□□ 0.06
TNFRSF1A-213ENST00000540022 SLC6A1P30531 599 aa15.42■□□□□ 0.06
TNFRSF1A-213ENST00000540022 KRTAP21-3Q3LHN1 58 aa15.42■□□□□ 0.06
TNFRSF1A-213ENST00000540022 SLC25A48Q6ZT89 311 aaKnown RBP15.42■□□□□ 0.06
TNFRSF1A-213ENST00000540022 PDZD9Q8IXQ8 264 aa15.42■□□□□ 0.06
TNFRSF1A-213ENST00000540022 PNKDQ8N490 385 aa15.42■□□□□ 0.06
TNFRSF1A-213ENST00000540022 OR2AK2Q8NG84 335 aa15.42■□□□□ 0.06
TNFRSF1A-213ENST00000540022 EDARADDQ8WWZ3 215 aa15.42■□□□□ 0.06
TNFRSF1A-213ENST00000540022 CLEC7AQ9BXN2 247 aa15.42■□□□□ 0.06
TNFRSF1A-213ENST00000540022 ITGB1BP1O14713 200 aa15.41■□□□□ 0.06
TNFRSF1A-213ENST00000540022 LUMP51884 338 aaPredicted RBP15.41■□□□□ 0.06
TNFRSF1A-213ENST00000540022 HERV-K104P61576 105 aa15.41■□□□□ 0.06
TNFRSF1A-213ENST00000540022 NRARPQ7Z6K4 114 aa15.41■□□□□ 0.06
TNFRSF1A-213ENST00000540022 OR13D1Q8NGV5 346 aa15.41■□□□□ 0.06
TNFRSF1A-213ENST00000540022 OR9G1Q8NH87 305 aa15.41■□□□□ 0.06
TNFRSF1A-213ENST00000540022 LHX4Q969G2 390 aa15.41■□□□□ 0.06
TNFRSF1A-213ENST00000540022 TOMM40LQ969M1 308 aa15.41■□□□□ 0.06
TNFRSF1A-213ENST00000540022 ABHD14AQ9BUJ0 271 aa15.41■□□□□ 0.06
TNFRSF1A-213ENST00000540022 IFI27L2Q9H2X8 130 aa15.41■□□□□ 0.06
TNFRSF1A-213ENST00000540022 RNF150Q9ULK6 438 aa15.41■□□□□ 0.06
TNFRSF1A-213ENST00000540022 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.41■□□□□ 0.061e-6■■■□□ 16.3
TNFRSF1A-213ENST00000540022 J3QLI3 93 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms