RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 CYB5R2Q6BCY4 276 aa14.15□□□□□ -0.14
CLN6-202ENST00000538696 H1FOOQ8IZA3 346 aaPredicted RBP14.15□□□□□ -0.14
CLN6-202ENST00000538696 ZNF431Q8TF32 576 aaPredicted RBP14.15□□□□□ -0.14
CLN6-202ENST00000538696 IL1F10Q8WWZ1 152 aa14.15□□□□□ -0.14
CLN6-202ENST00000538696 TMEM186Q96B77 213 aa14.15□□□□□ -0.14
CLN6-202ENST00000538696 NCOR1P1Q9H4R4 102 aa14.15□□□□□ -0.14
CLN6-202ENST00000538696 TRAV20A0A0B4J274 112 aa14.15□□□□□ -0.15
CLN6-202ENST00000538696 PPIAL4CA0A0B4J2A2 164 aa14.15□□□□□ -0.15
CLN6-202ENST00000538696 hADV38S2A0JD32 116 aa14.15□□□□□ -0.15
CLN6-202ENST00000538696 FAM172BPA6NC97 362 aa14.15□□□□□ -0.15
CLN6-202ENST00000538696 C15orf65H3BRN8 121 aa14.15□□□□□ -0.15
CLN6-202ENST00000538696 CREBL2O60519 120 aaPredicted RBP14.15□□□□□ -0.15
CLN6-202ENST00000538696 CCNKO75909 580 aa14.15□□□□□ -0.15
CLN6-202ENST00000538696 DIRAS3O95661 229 aa14.15□□□□□ -0.15
CLN6-202ENST00000538696 TGFAP01135 160 aa14.15□□□□□ -0.15
CLN6-202ENST00000538696 HBZP02008 142 aa14.15□□□□□ -0.15
CLN6-202ENST00000538696 PPIAL4GP0DN37 164 aa14.15□□□□□ -0.15
CLN6-202ENST00000538696 CD99P14209 185 aa14.15□□□□□ -0.15
CLN6-202ENST00000538696 AKR1C4P17516 323 aa14.15□□□□□ -0.15
CLN6-202ENST00000538696 ZBTB25P24278 435 aa14.15□□□□□ -0.15
CLN6-202ENST00000538696 SSTR5P35346 364 aa14.15□□□□□ -0.15
CLN6-202ENST00000538696 DVL1P1P54792 670 aaPredicted RBP14.15□□□□□ -0.15
CLN6-202ENST00000538696 UBE2MP61081 183 aaKnown RBP14.15□□□□□ -0.15
CLN6-202ENST00000538696 DHRS2Q13268 280 aa14.15□□□□□ -0.15
CLN6-202ENST00000538696 LYG2Q86SG7 212 aa14.15□□□□□ -0.15
CLN6-202ENST00000538696 OR11H7Q8NGC8 314 aa14.15□□□□□ -0.15
CLN6-202ENST00000538696 ST6GAL2Q96JF0 529 aa14.15□□□□□ -0.15
CLN6-202ENST00000538696 LPAR3Q9UBY5 353 aa14.15□□□□□ -0.15
CLN6-202ENST00000538696 C14orf166Q9Y224 244 aaKnown RBP14.15□□□□□ -0.15
CLN6-202ENST00000538696 INSIG2Q9Y5U4 225 aa14.15□□□□□ -0.15
CLN6-202ENST00000538696 LINC00312Q9Y6C7 94 aa14.15□□□□□ -0.15
CLN6-202ENST00000538696 IGKV1D-13A0A0B4J2D9 117 aa14.14□□□□□ -0.15
CLN6-202ENST00000538696 LIPFP07098 398 aa14.14□□□□□ -0.15
CLN6-202ENST00000538696 SULT1A3P0DMM9 295 aa14.14□□□□□ -0.15
CLN6-202ENST00000538696 SULT1A4P0DMN0 295 aa14.14□□□□□ -0.15
CLN6-202ENST00000538696 IGKV1-13P0DP09 117 aa14.14□□□□□ -0.15
CLN6-202ENST00000538696 CCL3L1P16619 93 aa14.14□□□□□ -0.15
CLN6-202ENST00000538696 UCP3P55916 312 aa14.14□□□□□ -0.15
CLN6-202ENST00000538696 FAHD2BQ6P2I3 314 aaPredicted RBP14.14□□□□□ -0.15
CLN6-202ENST00000538696 OR10J5Q8NHC4 309 aa14.14□□□□□ -0.15
CLN6-202ENST00000538696 ARL11Q969Q4 196 aa14.14□□□□□ -0.15
CLN6-202ENST00000538696 FAHD2AQ96GK7 314 aa14.14□□□□□ -0.15
CLN6-202ENST00000538696 PARP12Q9H0J9 701 aaKnown RBP14.14□□□□□ -0.15
CLN6-202ENST00000538696 HIF1ANQ9NWT6 349 aa14.14□□□□□ -0.15
CLN6-202ENST00000538696 TRGV10A0A0A0MS01 117 aa14.13□□□□□ -0.15
CLN6-202ENST00000538696 C9orf170A2RU37 121 aa14.13□□□□□ -0.15
CLN6-202ENST00000538696 CD5LO43866 347 aa14.13□□□□□ -0.15
CLN6-202ENST00000538696 HLA-AP01891 365 aaKnown RBP14.13□□□□□ -0.15
CLN6-202ENST00000538696 DLX6P56179 175 aa14.13□□□□□ -0.15
CLN6-202ENST00000538696 CD83Q01151 205 aa14.13□□□□□ -0.15
CLN6-202ENST00000538696 DHODHQ02127 395 aa14.13□□□□□ -0.15
CLN6-202ENST00000538696 GNMTQ14749 295 aa14.13□□□□□ -0.15
CLN6-202ENST00000538696 CR1LQ2VPA4 569 aa14.13□□□□□ -0.15
CLN6-202ENST00000538696 DCAF12L2Q5VW00 463 aa14.13□□□□□ -0.15
CLN6-202ENST00000538696 FAM53AQ6NSI3 398 aaPredicted RBP14.13□□□□□ -0.15
CLN6-202ENST00000538696 TRAT1Q6PIZ9 186 aa14.13□□□□□ -0.15
CLN6-202ENST00000538696 BTNL3Q6UXE8 466 aa14.13□□□□□ -0.15
CLN6-202ENST00000538696 LDLRAD3Q86YD5 345 aa14.13□□□□□ -0.15
CLN6-202ENST00000538696 OR52L2PQ8NGH6 319 aa14.13□□□□□ -0.15
CLN6-202ENST00000538696 ZFAND1Q8TCF1 268 aa14.13□□□□□ -0.15
CLN6-202ENST00000538696 CORO2AQ92828 525 aa14.13□□□□□ -0.15
CLN6-202ENST00000538696 SMR3AQ99954 134 aa14.13□□□□□ -0.15
CLN6-202ENST00000538696 OR6C3Q9NZP0 311 aa14.13□□□□□ -0.15
CLN6-202ENST00000538696 ONECUT1Q9UBC0 465 aa14.13□□□□□ -0.15
CLN6-202ENST00000538696 UBE2J1Q9Y385 318 aaPredicted RBP14.13□□□□□ -0.15
CLN6-202ENST00000538696 CGB3P0DN86 165 aa14.12□□□□□ -0.15
CLN6-202ENST00000538696 CGB7P0DN87 165 aa14.12□□□□□ -0.15
CLN6-202ENST00000538696 FOSL1P15407 271 aa14.12□□□□□ -0.15
CLN6-202ENST00000538696 CXCL3P19876 107 aa14.12□□□□□ -0.15
CLN6-202ENST00000538696 VAMP1P23763 118 aa14.12□□□□□ -0.15
CLN6-202ENST00000538696 PAX8Q06710 450 aa14.12□□□□□ -0.15
CLN6-202ENST00000538696 C2orf68Q2NKX9 166 aa14.12□□□□□ -0.15
CLN6-202ENST00000538696 PHLDA2Q53GA4 152 aa14.12□□□□□ -0.15
CLN6-202ENST00000538696 SLC38A6Q8IZM9 456 aa14.12□□□□□ -0.15
CLN6-202ENST00000538696 KIR3DL3Q8N743 410 aa14.12□□□□□ -0.15
CLN6-202ENST00000538696 RFESDQ8TAC1 157 aa14.12□□□□□ -0.15
CLN6-202ENST00000538696 SECTM1Q8WVN6 248 aa14.12□□□□□ -0.15
CLN6-202ENST00000538696 PPP1R14BQ96C90 147 aa14.12□□□□□ -0.15
CLN6-202ENST00000538696 DMRTB1Q96MA1 342 aa14.12□□□□□ -0.15
CLN6-202ENST00000538696 ZNF714Q96N38 554 aa14.12□□□□□ -0.15
CLN6-202ENST00000538696 RSRP1Q9BUV0 290 aa14.12□□□□□ -0.15
CLN6-202ENST00000538696 SLC5A7Q9GZV3 580 aa14.12□□□□□ -0.15
CLN6-202ENST00000538696 SIRPDQ9H106 197 aa14.12□□□□□ -0.15
CLN6-202ENST00000538696 RANGRFQ9HD47 186 aaPredicted RBP14.12□□□□□ -0.15
CLN6-202ENST00000538696 RDH8Q9NYR8 311 aa14.12□□□□□ -0.15
CLN6-202ENST00000538696 MGAT4CQ9UBM8 478 aa14.12□□□□□ -0.15
CLN6-202ENST00000538696 OR2W1Q9Y3N9 320 aa14.12□□□□□ -0.15
CLN6-202ENST00000538696 ZANQ9Y493 2812 aa14.11□□□□□ -0.15
CLN6-202ENST00000538696 CSPG4Q6UVK1 2322 aa14.11□□□□□ -0.15
CLN6-202ENST00000538696 HSPA12AO43301 675 aa14.11□□□□□ -0.15
CLN6-202ENST00000538696 SFT2D2O95562 160 aa14.11□□□□□ -0.15
CLN6-202ENST00000538696 HNRNPCP07910 306 aaKnown RBP eCLIP14.11□□□□□ -0.15
CLN6-202ENST00000538696 ARF6P62330 175 aa14.11□□□□□ -0.15
CLN6-202ENST00000538696 SUPT4H1P63272 117 aaKnown RBP14.11□□□□□ -0.15
CLN6-202ENST00000538696 C17orf58Q2M2W7 97 aa14.11□□□□□ -0.15
CLN6-202ENST00000538696 TMEM128Q5BJH2 165 aa14.11□□□□□ -0.15
CLN6-202ENST00000538696 C12orf45Q8N5I9 185 aaPredicted RBP14.11□□□□□ -0.15
CLN6-202ENST00000538696 C11orf42Q8N5U0 333 aa14.11□□□□□ -0.15
CLN6-202ENST00000538696 Q8N7P7 452 aa14.11□□□□□ -0.15
CLN6-202ENST00000538696 OR2AK2Q8NG84 335 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms