RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 THOC3Q96J01 351 aaKnown RBP7.74□□□□□ -1.17
SNHG1-209ENST00000538654 TRIB1Q96RU8 372 aa7.74□□□□□ -1.17
SNHG1-209ENST00000538654 MYO7AQ13402 2215 aa7.74□□□□□ -1.17
SNHG1-209ENST00000538654 C5orf63A6NC05 138 aa7.73□□□□□ -1.17
SNHG1-209ENST00000538654 FBLL1A6NHQ2 334 aaKnown RBP7.73□□□□□ -1.17
SNHG1-209ENST00000538654 H0Y980 276 aa7.73□□□□□ -1.17
SNHG1-209ENST00000538654 M0R135 149 aa7.73□□□□□ -1.17
SNHG1-209ENST00000538654 OR2J2O76002 312 aa7.73□□□□□ -1.17
SNHG1-209ENST00000538654 CER1O95813 267 aa7.73□□□□□ -1.17
SNHG1-209ENST00000538654 CEBPDP49716 269 aaPredicted RBP7.73□□□□□ -1.17
SNHG1-209ENST00000538654 YLPM1P49750 1951 aaKnown RBP7.73□□□□□ -1.17
SNHG1-209ENST00000538654 BLKP51451 505 aa7.73□□□□□ -1.17
SNHG1-209ENST00000538654 FGF8P55075 233 aaPredicted RBP7.73□□□□□ -1.17
SNHG1-209ENST00000538654 MRPS11P82912 194 aaKnown RBP7.73□□□□□ -1.17
SNHG1-209ENST00000538654 RNPS1Q15287 305 aaKnown RBP7.73□□□□□ -1.17
SNHG1-209ENST00000538654 RBPMS2Q6ZRY4 209 aaKnown RBP7.73□□□□□ -1.17
SNHG1-209ENST00000538654 LHX4Q969G2 390 aa7.73□□□□□ -1.17
SNHG1-209ENST00000538654 ZNF799Q96GE5 643 aa7.73□□□□□ -1.17
SNHG1-209ENST00000538654 RSG1Q9BU20 258 aa7.73□□□□□ -1.17
SNHG1-209ENST00000538654 GAL3ST2Q9H3Q3 398 aa7.73□□□□□ -1.17
SNHG1-209ENST00000538654 ZNF442Q9H7R0 627 aa7.73□□□□□ -1.17
SNHG1-209ENST00000538654 MANBALQ9NQG1 85 aa7.73□□□□□ -1.17
SNHG1-209ENST00000538654 SLC39A9Q9NUM3 307 aa7.73□□□□□ -1.17
SNHG1-209ENST00000538654 PLA2G3Q9NZ20 509 aa7.73□□□□□ -1.17
SNHG1-209ENST00000538654 SEMA5BQ9P283 1151 aa7.73□□□□□ -1.17
SNHG1-209ENST00000538654 ST3GAL6Q9Y274 331 aa7.73□□□□□ -1.17
SNHG1-209ENST00000538654 TNFSF13O75888 250 aa7.73□□□□□ -1.17
SNHG1-209ENST00000538654 FBLP22087 321 aaKnown RBP7.73□□□□□ -1.17
SNHG1-209ENST00000538654 FKBP2P26885 142 aaKnown RBP7.73□□□□□ -1.17
SNHG1-209ENST00000538654 MLF1P58340 268 aa7.73□□□□□ -1.17
SNHG1-209ENST00000538654 LRRC75BQ2VPJ9 315 aa7.73□□□□□ -1.17
SNHG1-209ENST00000538654 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.73□□□□□ -1.17
SNHG1-209ENST00000538654 SLC22A18ASQ8N1D0 253 aa7.73□□□□□ -1.17
SNHG1-209ENST00000538654 DYRK2Q92630 601 aa7.73□□□□□ -1.17
SNHG1-209ENST00000538654 TBX15Q96SF7 602 aa7.73□□□□□ -1.17
SNHG1-209ENST00000538654 ALKBH7Q9BT30 221 aaPredicted RBP7.73□□□□□ -1.17
SNHG1-209ENST00000538654 PLA2G2FQ9BZM2 168 aa7.73□□□□□ -1.17
SNHG1-209ENST00000538654 SLC7A10Q9NS82 523 aa7.73□□□□□ -1.17
SNHG1-209ENST00000538654 EXPH5Q8NEV8 1989 aa7.72□□□□□ -1.17
SNHG1-209ENST00000538654 LRRC3CA6NJW4 275 aa7.72□□□□□ -1.17
SNHG1-209ENST00000538654 BRI3O95415 125 aa7.72□□□□□ -1.17
SNHG1-209ENST00000538654 CTXN2P0C2S0 81 aa7.72□□□□□ -1.17
SNHG1-209ENST00000538654 CD99P14209 185 aa7.72□□□□□ -1.17
SNHG1-209ENST00000538654 BRS3P32247 399 aa7.72□□□□□ -1.17
SNHG1-209ENST00000538654 ID1P41134 155 aa7.72□□□□□ -1.17
SNHG1-209ENST00000538654 TNFSF10P50591 281 aa7.72□□□□□ -1.17
SNHG1-209ENST00000538654 GNB2P62879 340 aa7.72□□□□□ -1.17
SNHG1-209ENST00000538654 PAFAH1B2P68402 229 aa7.72□□□□□ -1.17
SNHG1-209ENST00000538654 SHBQ15464 509 aa7.72□□□□□ -1.17
SNHG1-209ENST00000538654 TMEM183BQ1AE95 376 aa7.72□□□□□ -1.17
SNHG1-209ENST00000538654 ZNF542PQ5EBM4 170 aa7.72□□□□□ -1.17
SNHG1-209ENST00000538654 HIST2H2BCQ6DN03 193 aa7.72□□□□□ -1.17
SNHG1-209ENST00000538654 HIST2H2BDQ6DRA6 164 aa7.72□□□□□ -1.17
SNHG1-209ENST00000538654 RPUSD4Q96CM3 377 aaKnown RBP7.72□□□□□ -1.17
SNHG1-209ENST00000538654 ZNF385AQ96PM9 386 aaKnown RBP7.72□□□□□ -1.17
SNHG1-209ENST00000538654 LPAR2Q9HBW0 351 aa7.72□□□□□ -1.17
SNHG1-209ENST00000538654 PARD6AQ9NPB6 346 aa7.72□□□□□ -1.17
SNHG1-209ENST00000538654 TAAR3PQ9P1P4 343 aa7.72□□□□□ -1.17
SNHG1-209ENST00000538654 TIMM9Q9Y5J7 89 aa7.72□□□□□ -1.17
SNHG1-209ENST00000538654 SPTY2D1-AS1A0A0U1RR47 76 aa7.72□□□□□ -1.17
SNHG1-209ENST00000538654 LILRA5A6NI73 299 aa7.72□□□□□ -1.17
SNHG1-209ENST00000538654 C19orf67A6NJJ6 358 aa7.72□□□□□ -1.17
SNHG1-209ENST00000538654 RPS18P62269 152 aaKnown RBP7.72□□□□□ -1.17
SNHG1-209ENST00000538654 MRPL49Q13405 166 aaKnown RBP7.72□□□□□ -1.17
SNHG1-209ENST00000538654 PLPPR5Q32ZL2 321 aa7.72□□□□□ -1.17
SNHG1-209ENST00000538654 PIGYQ3MUY2 71 aa7.72□□□□□ -1.17
SNHG1-209ENST00000538654 COL5A1-AS1Q5SY13 56 aa7.72□□□□□ -1.17
SNHG1-209ENST00000538654 C10orf128Q5T292 105 aa7.72□□□□□ -1.17
SNHG1-209ENST00000538654 ZNF818PQ6ZRF7 136 aa7.72□□□□□ -1.17
SNHG1-209ENST00000538654 C20orf196Q8IYI0 205 aa7.72□□□□□ -1.17
SNHG1-209ENST00000538654 GAPTQ8N292 157 aa7.72□□□□□ -1.17
SNHG1-209ENST00000538654 ZNF525Q8N782 197 aa7.72□□□□□ -1.17
SNHG1-209ENST00000538654 MRPL30Q8TCC3 161 aaKnown RBP7.72□□□□□ -1.17
SNHG1-209ENST00000538654 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.72□□□□□ -1.17
SNHG1-209ENST00000538654 PARLQ9H300 379 aa7.72□□□□□ -1.17
SNHG1-209ENST00000538654 ASCL3Q9NQ33 180 aa7.72□□□□□ -1.17
SNHG1-209ENST00000538654 TRAPPC1Q9Y5R8 145 aa7.72□□□□□ -1.17
SNHG1-209ENST00000538654 GYPAP02724 150 aa7.71□□□□□ -1.17
SNHG1-209ENST00000538654 RBM11P57052 281 aaKnown RBP7.71□□□□□ -1.17
SNHG1-209ENST00000538654 TPPP2P59282 170 aa7.71□□□□□ -1.17
SNHG1-209ENST00000538654 DLX2Q07687 328 aaPredicted RBP7.71□□□□□ -1.17
SNHG1-209ENST00000538654 TMEM267Q0VDI3 215 aaPredicted RBP7.71□□□□□ -1.17
SNHG1-209ENST00000538654 C1orf61Q13536 156 aa7.71□□□□□ -1.17
SNHG1-209ENST00000538654 ENDOGQ14249 297 aaKnown RBP7.71□□□□□ -1.17
SNHG1-209ENST00000538654 FOXL2NBQ6ZUU3 175 aa7.71□□□□□ -1.17
SNHG1-209ENST00000538654 VSIRQ9H7M9 311 aa7.71□□□□□ -1.17
SNHG1-209ENST00000538654 GPR35Q9HC97 309 aa7.71□□□□□ -1.17
SNHG1-209ENST00000538654 IL23AQ9NPF7 189 aa7.71□□□□□ -1.17
SNHG1-209ENST00000538654 ZNF391Q9UJN7 358 aa7.71□□□□□ -1.17
SNHG1-209ENST00000538654 THADAQ6YHU6 1953 aa7.71□□□□□ -1.17
SNHG1-209ENST00000538654 IGHV5-51A0A0C4DH38 117 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 FAM90A10PA6NDY2 464 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 FAM90A8PA6NJQ4 464 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 FAM90A7PA6NKC0 464 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 CGB1A6NKQ9 187 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 AQP7P3A6NL99 342 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 ZNF785A8K8V0 405 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 FAM90A22PA8MWA6 464 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 FAM90A12PA8MX19 464 aa7.71□□□□□ -1.18
SNHG1-209ENST00000538654 FAM90A23PA8MXZ1 464 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms