RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 LOXL1Q08397 574 aaPredicted RBP3.57□□□□□ -1.84
SNHG1-208ENST00000538266 ZNF273Q14593 569 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 RBMS2Q15434 407 aaKnown RBP3.57□□□□□ -1.84
SNHG1-208ENST00000538266 FAM189A2Q15884 450 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 LRRC10Q5BKY1 277 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 NHLRC3Q5JS37 347 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 SPIN3Q5JUX0 258 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 HES5Q5TA89 166 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 TEX36Q5VZQ5 186 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 ASPHD2Q6ICH7 369 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 GLIPR1L1Q6UWM5 242 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 GSG1LQ6UXU4 331 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 SPNS3Q6ZMD2 512 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 ACP7Q6ZNF0 438 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 Q6ZTK2 550 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 TMUB2Q71RG4 321 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 LRRTM1Q86UE6 522 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 ABCA12Q86UK0 2595 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 PDZD9Q8IXQ8 264 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 FAM58AQ8N1B3 248 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 BATF2Q8N1L9 274 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 TMEM185AQ8NFB2 350 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 PXT1Q8NFP0 134 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 OR5T2Q8NGG2 359 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 OR4D6Q8NGJ1 314 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 OR10K1Q8NGX5 313 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 OR52I2Q8NH67 350 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 CLDND2Q8NHS1 167 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 KCNG3Q8TAE7 436 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 CCDC107Q8WV48 283 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 PCNPQ8WW12 178 aaKnown RBP3.57□□□□□ -1.84
SNHG1-208ENST00000538266 FAM46BQ96A09 425 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 MRPS24Q96EL2 167 aaKnown RBP3.57□□□□□ -1.84
SNHG1-208ENST00000538266 S100A16Q96FQ6 103 aaKnown RBP3.57□□□□□ -1.84
SNHG1-208ENST00000538266 ZNF488Q96MN9 340 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 LINC00052Q96N35 136 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 OR2A7Q96R45 310 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 NKX3-1Q99801 234 aaPredicted RBP3.57□□□□□ -1.84
SNHG1-208ENST00000538266 GINS4Q9BRT9 223 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 PRSS22Q9GZN4 317 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 FXYD6Q9H0Q3 95 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 DNTTIP1Q9H147 329 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 ZNF665Q9H7R5 613 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 BEX1Q9HBH7 125 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 LIN7CQ9NUP9 197 aaKnown RBP3.57□□□□□ -1.84
SNHG1-208ENST00000538266 TAS2R8Q9NYW2 309 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 IL36GQ9NZH8 169 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 MTCH1Q9NZJ7 389 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 PIPOXQ9P0Z9 390 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 GHRLQ9UBU3 117 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 CLN8Q9UBY8 286 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 OR14J1Q9UGF5 321 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 OR5V1Q9UGF6 321 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 AK6Q9Y3D8 172 aaKnown RBP3.57□□□□□ -1.84
SNHG1-208ENST00000538266 V9GY05 133 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 HRNRQ86YZ3 2850 aaPredicted RBP3.56□□□□□ -1.84
SNHG1-208ENST00000538266 IGKV1D-17A0A075B6S4 117 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 IGKV1-12A0A0C4DH73 117 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 FAM90A18PA6NE21 464 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 FAM90A16PA6NEW6 464 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 RFPL4AA6NLU0 287 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 FAM90A9PA6NNJ1 464 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 FAM90A5PA8MXJ8 464 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 B4DSR2 109 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 MCRIP1C9JLW8 97 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 RFPL4AL1F8VTS6 287 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.56□□□□□ -1.84
SNHG1-208ENST00000538266 HSPB6O14558 160 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 DVL1O14640 695 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 GOSR2O14653 212 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 TOR1AO14656 332 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 DEGS1O15121 323 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 ARPC5O15511 151 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 FOXH1O75593 365 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 OR7C1O76099 320 aaPredicted RBP3.56□□□□□ -1.84
SNHG1-208ENST00000538266 HAND1O96004 215 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 IGKV1D-12P01611 117 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 IGHV2-5P01817 119 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 SFTPBP07988 381 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 FGF2P09038 288 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 FAM90A15PP0C7V4 464 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 FAM90A14PP0C7W9 464 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 PSG2P11465 335 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 CD99P14209 185 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 ZNF44P15621 663 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 RPA2P15927 270 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 MGMTP16455 207 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 ADRA2CP18825 462 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 NFYAP23511 347 aaPredicted RBP3.56□□□□□ -1.84
SNHG1-208ENST00000538266 GABRR1P24046 479 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 CDK2P24941 298 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 PRDX2P32119 198 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 NPBWR2P48146 333 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 CEBPDP49716 269 aaPredicted RBP3.56□□□□□ -1.84
SNHG1-208ENST00000538266 NPY4RP50391 375 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 RBM11P57052 281 aaKnown RBP3.56□□□□□ -1.84
SNHG1-208ENST00000538266 TAS2R20P59543 309 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 FGF12P61328 243 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 ERVK11-1P61568 191 aa3.56□□□□□ -1.84
SNHG1-208ENST00000538266 FLI1Q01543 452 aaPredicted RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms