RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 NPIPA3F8WFD2 350 aa6.66□□□□□ -1.34
CPSF7-216ENST00000536548 H7BYZ3 331 aa6.66□□□□□ -1.34
CPSF7-216ENST00000536548 M0R143 59 aa6.66□□□□□ -1.34
CPSF7-216ENST00000536548 ANGPTL7O43827 346 aa6.66□□□□□ -1.34
CPSF7-216ENST00000536548 EFNA2O43921 213 aa6.66□□□□□ -1.34
CPSF7-216ENST00000536548 CYTIPO60759 359 aa6.66□□□□□ -1.34
CPSF7-216ENST00000536548 CST7O76096 145 aa6.66□□□□□ -1.34
CPSF7-216ENST00000536548 AMBPP02760 352 aa6.66□□□□□ -1.34
CPSF7-216ENST00000536548 WNT2P09544 360 aa6.66□□□□□ -1.34
CPSF7-216ENST00000536548 GZMBP10144 247 aa6.66□□□□□ -1.34
CPSF7-216ENST00000536548 SRP14P37108 136 aaKnown RBP6.66□□□□□ -1.34
CPSF7-216ENST00000536548 KIR2DS4P43632 304 aa6.66□□□□□ -1.34
CPSF7-216ENST00000536548 PDLIM4P50479 330 aa6.66□□□□□ -1.34
CPSF7-216ENST00000536548 CLDN15P56746 228 aa6.66□□□□□ -1.34
CPSF7-216ENST00000536548 HBG1P69891 147 aa6.66□□□□□ -1.34
CPSF7-216ENST00000536548 HBG2P69892 147 aa6.66□□□□□ -1.34
CPSF7-216ENST00000536548 MRPS34P82930 218 aaKnown RBP6.66□□□□□ -1.34
CPSF7-216ENST00000536548 RELQ04864 619 aaPredicted RBP6.66□□□□□ -1.34
CPSF7-216ENST00000536548 KIR2DS1Q14954 304 aa6.66□□□□□ -1.34
CPSF7-216ENST00000536548 TMEM241Q24JQ0 296 aa6.66□□□□□ -1.34
CPSF7-216ENST00000536548 TMEM41BQ5BJD5 291 aa6.66□□□□□ -1.34
CPSF7-216ENST00000536548 NMSQ5H8A3 153 aa6.66□□□□□ -1.34
CPSF7-216ENST00000536548 KCNIP4Q6PIL6 250 aa6.66□□□□□ -1.34
CPSF7-216ENST00000536548 CYP2G1PQ6ZSU1 146 aa6.66□□□□□ -1.34
CPSF7-216ENST00000536548 P4HA3Q7Z4N8 544 aa6.66□□□□□ -1.34
CPSF7-216ENST00000536548 ANKRD37Q7Z713 158 aa6.66□□□□□ -1.34
CPSF7-216ENST00000536548 THNSL2Q86YJ6 484 aa6.66□□□□□ -1.34
CPSF7-216ENST00000536548 TGIF2LXQ8IUE1 241 aa6.66□□□□□ -1.34
CPSF7-216ENST00000536548 PLXDC1Q8IUK5 500 aa6.66□□□□□ -1.34
CPSF7-216ENST00000536548 PRSS58Q8IYP2 241 aa6.66□□□□□ -1.34
CPSF7-216ENST00000536548 TMEM123Q8N131 208 aa6.66□□□□□ -1.34
CPSF7-216ENST00000536548 OR2M3Q8NG83 312 aa6.66□□□□□ -1.34
CPSF7-216ENST00000536548 TMEM171Q8WVE6 324 aa6.66□□□□□ -1.34
CPSF7-216ENST00000536548 TMEM170AQ8WVE7 144 aa6.66□□□□□ -1.34
CPSF7-216ENST00000536548 ADGRG7Q96K78 797 aa6.66□□□□□ -1.34
CPSF7-216ENST00000536548 RBM14Q96PK6 669 aaKnown RBP6.66□□□□□ -1.34
CPSF7-216ENST00000536548 SPRY4Q9C004 299 aa6.66□□□□□ -1.34
CPSF7-216ENST00000536548 PLEK2Q9NYT0 353 aa6.66□□□□□ -1.34
CPSF7-216ENST00000536548 GAB2Q9UQC2 676 aa6.66□□□□□ -1.34
CPSF7-216ENST00000536548 ST3GAL6Q9Y274 331 aa6.66□□□□□ -1.34
CPSF7-216ENST00000536548 TIMM9Q9Y5J7 89 aa6.66□□□□□ -1.34
CPSF7-216ENST00000536548 TRBV11-1A0A0K0K1C0 115 aa6.65□□□□□ -1.34
CPSF7-216ENST00000536548 A0A1W2PNR3 127 aa6.65□□□□□ -1.34
CPSF7-216ENST00000536548 CEBPZOSA8MTT3 80 aa6.65□□□□□ -1.34
CPSF7-216ENST00000536548 ZNF705GA8MUZ8 300 aaPredicted RBP6.65□□□□□ -1.34
CPSF7-216ENST00000536548 E9PLN8 166 aa6.65□□□□□ -1.34
CPSF7-216ENST00000536548 TMEM250H0YL14 139 aa6.65□□□□□ -1.34
CPSF7-216ENST00000536548 TP53I11O14683 189 aa6.65□□□□□ -1.34
CPSF7-216ENST00000536548 SPRY1O43609 319 aaPredicted RBP6.65□□□□□ -1.34
CPSF7-216ENST00000536548 CHST1O43916 411 aa6.65□□□□□ -1.34
CPSF7-216ENST00000536548 ZG16O60844 167 aa6.65□□□□□ -1.34
CPSF7-216ENST00000536548 OR2J2O76002 312 aa6.65□□□□□ -1.34
CPSF7-216ENST00000536548 ZFAND5O76080 213 aa6.65□□□□□ -1.34
CPSF7-216ENST00000536548 NRASP01111 189 aa6.65□□□□□ -1.34
CPSF7-216ENST00000536548 HRASP01112 189 aa6.65□□□□□ -1.34
CPSF7-216ENST00000536548 PFN1P07737 140 aaKnown RBP6.65□□□□□ -1.34
CPSF7-216ENST00000536548 CST2P09228 141 aa6.65□□□□□ -1.34
CPSF7-216ENST00000536548 GLB1P16278 677 aa6.65□□□□□ -1.34
CPSF7-216ENST00000536548 GALR1P47211 349 aa6.65□□□□□ -1.34
CPSF7-216ENST00000536548 IDH3GP51553 393 aaPredicted RBP6.65□□□□□ -1.34
CPSF7-216ENST00000536548 RBM11P57052 281 aaKnown RBP6.65□□□□□ -1.34
CPSF7-216ENST00000536548 OR1D5P58170 312 aa6.65□□□□□ -1.34
CPSF7-216ENST00000536548 RUNX1Q01196 453 aa6.65□□□□□ -1.34
CPSF7-216ENST00000536548 ZNF154Q13106 437 aa6.65□□□□□ -1.34
CPSF7-216ENST00000536548 PRDX4Q13162 271 aa6.65□□□□□ -1.34
CPSF7-216ENST00000536548 RNPS1Q15287 305 aaKnown RBP6.65□□□□□ -1.34
CPSF7-216ENST00000536548 BSXQ3C1V8 233 aa6.65□□□□□ -1.34
CPSF7-216ENST00000536548 CXorf66Q5JRM2 361 aaPredicted RBP6.65□□□□□ -1.34
CPSF7-216ENST00000536548 FAM27BQ5VT28 67 aa6.65□□□□□ -1.34
CPSF7-216ENST00000536548 TMEM42Q69YG0 159 aa6.65□□□□□ -1.34
CPSF7-216ENST00000536548 ABLIM2Q6H8Q1 611 aa6.65□□□□□ -1.34
CPSF7-216ENST00000536548 LANCL3Q6ZV70 420 aa6.65□□□□□ -1.34
CPSF7-216ENST00000536548 C16orf82Q7Z2V1 217 aa6.65□□□□□ -1.34
CPSF7-216ENST00000536548 DMRTC2Q8IXT2 367 aaPredicted RBP6.65□□□□□ -1.34
CPSF7-216ENST00000536548 CISD2Q8N5K1 135 aaKnown RBP6.65□□□□□ -1.34
CPSF7-216ENST00000536548 TMEM217Q8N7C4 229 aa6.65□□□□□ -1.34
CPSF7-216ENST00000536548 NFAM1Q8NET5 270 aaPredicted RBP6.65□□□□□ -1.34
CPSF7-216ENST00000536548 CA5BP1Q8WTZ4 195 aa6.65□□□□□ -1.34
CPSF7-216ENST00000536548 NABP1Q96AH0 204 aa6.65□□□□□ -1.34
CPSF7-216ENST00000536548 R3HDM4Q96D70 268 aa6.65□□□□□ -1.34
CPSF7-216ENST00000536548 CCDC74BQ96LY2 380 aa6.65□□□□□ -1.34
CPSF7-216ENST00000536548 SIGLEC12Q96PQ1 595 aa6.65□□□□□ -1.34
CPSF7-216ENST00000536548 ULBP2Q9BZM5 246 aa6.65□□□□□ -1.34
CPSF7-216ENST00000536548 MAGT1Q9H0U3 335 aa6.65□□□□□ -1.34
CPSF7-216ENST00000536548 RIMS4Q9H426 269 aaPredicted RBP6.65□□□□□ -1.34
CPSF7-216ENST00000536548 PRSS50Q9UI38 385 aa6.65□□□□□ -1.34
CPSF7-216ENST00000536548 LAMP3Q9UQV4 416 aa6.65□□□□□ -1.34
CPSF7-216ENST00000536548 CBY1Q9Y3M2 126 aa6.65□□□□□ -1.34
CPSF7-216ENST00000536548 HEATR5AQ86XA9 2040 aa6.65□□□□□ -1.35
CPSF7-216ENST00000536548 CUBNO60494 3623 aa6.65□□□□□ -1.35
CPSF7-216ENST00000536548 POLEQ07864 2286 aa6.65□□□□□ -1.35
CPSF7-216ENST00000536548 ARHGEF17Q96PE2 2063 aaPredicted RBP6.64□□□□□ -1.35
CPSF7-216ENST00000536548 IGLV3-12A0A075B6K2 115 aa6.64□□□□□ -1.35
CPSF7-216ENST00000536548 ZNF816-ZNF321PA0A0X1KG74 233 aa6.64□□□□□ -1.35
CPSF7-216ENST00000536548 C5orf63A6NC05 138 aa6.64□□□□□ -1.35
CPSF7-216ENST00000536548 MAP1LC3B2A6NCE7 125 aa6.64□□□□□ -1.35
CPSF7-216ENST00000536548 SHISA8B8ZZ34 492 aa6.64□□□□□ -1.35
CPSF7-216ENST00000536548 KBTBD11O94819 623 aa6.64□□□□□ -1.35
CPSF7-216ENST00000536548 VENTXO95231 258 aa6.64□□□□□ -1.35
CPSF7-216ENST00000536548 MBP02144 154 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms