RNA–Protein interactions for RNA: ENST00000535934.2

POLE-208, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 5

Gene POLE, Length 1,561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-208	ENST00000535934	FAM90A1	Q86YD7	464 aa		11.69	□□□□□ -0.54
POLE-208	ENST00000535934	SEH1L	Q96EE3	360 aa		11.69	□□□□□ -0.54
POLE-208	ENST00000535934	LYZL4	Q96KX0	146 aa		11.69	□□□□□ -0.54
POLE-208	ENST00000535934	JMJD8	Q96S16	334 aa		11.69	□□□□□ -0.54
POLE-208	ENST00000535934	SULT4A1	Q9BR01	284 aa		11.69	□□□□□ -0.54
POLE-208	ENST00000535934	NUDT16L1	Q9BRJ7	211 aa	Known RBP	11.69	□□□□□ -0.54
POLE-208	ENST00000535934	SMDT1	Q9H4I9	107 aa		11.69	□□□□□ -0.54
POLE-208	ENST00000535934	CHMP1A	Q9HD42	196 aa	Predicted RBP	11.69	□□□□□ -0.54
POLE-208	ENST00000535934	SHPK	Q9UHJ6	478 aa		11.69	□□□□□ -0.54
POLE-208	ENST00000535934	TRAV18	A0A075B6X5	111 aa		11.68	□□□□□ -0.54
POLE-208	ENST00000535934	IGHV3OR15-7	A0A075B7D8	119 aa		11.68	□□□□□ -0.54
POLE-208	ENST00000535934	ZNF736	B4DX44	427 aa	Predicted RBP	11.68	□□□□□ -0.54
POLE-208	ENST00000535934	TSTD3	H0UI37	97 aa		11.68	□□□□□ -0.54
POLE-208	ENST00000535934	SCGN	O76038	276 aa		11.68	□□□□□ -0.54
POLE-208	ENST00000535934	DUS4L	O95620	317 aa	Known RBP	11.68	□□□□□ -0.54
POLE-208	ENST00000535934	AMY2A	P04746	511 aa		11.68	□□□□□ -0.54
POLE-208	ENST00000535934	OR8U8	P0C7N1	319 aa		11.68	□□□□□ -0.54
POLE-208	ENST00000535934	PPIAL4G	P0DN37	164 aa		11.68	□□□□□ -0.54
POLE-208	ENST00000535934	MUC1	P15941	1255 aa	Predicted RBP	11.68	□□□□□ -0.54
POLE-208	ENST00000535934	RAB4A	P20338	218 aa		11.68	□□□□□ -0.54
POLE-208	ENST00000535934	ACKR3	P25106	362 aa		11.68	□□□□□ -0.54
POLE-208	ENST00000535934	CDX1	P47902	265 aa	Predicted RBP	11.68	□□□□□ -0.54
POLE-208	ENST00000535934	AKR1C2	P52895	323 aa		11.68	□□□□□ -0.54
POLE-208	ENST00000535934	ATP1B3	P54709	279 aa		11.68	□□□□□ -0.54
POLE-208	ENST00000535934	AKR1C1	Q04828	323 aa		11.68	□□□□□ -0.54
POLE-208	ENST00000535934	ATPAF1	Q5TC12	328 aa	Predicted RBP	11.68	□□□□□ -0.54
POLE-208	ENST00000535934	TMED4	Q7Z7H5	227 aa		11.68	□□□□□ -0.54
POLE-208	ENST00000535934	FGFRL1	Q8N441	504 aa		11.68	□□□□□ -0.54
POLE-208	ENST00000535934	OR56B1	Q8NGI3	324 aa		11.68	□□□□□ -0.54
POLE-208	ENST00000535934	TAF15	Q92804	592 aa	Known RBP eCLIP	11.68	□□□□□ -0.54
POLE-208	ENST00000535934	PTX4	Q96A99	478 aa		11.68	□□□□□ -0.54
POLE-208	ENST00000535934	KIRREL1	Q96J84	757 aa		11.68	□□□□□ -0.54
POLE-208	ENST00000535934	CACFD1	Q9UGQ2	172 aa		11.68	□□□□□ -0.54
POLE-208	ENST00000535934	TMED3	Q9Y3Q3	217 aa		11.68	□□□□□ -0.54
POLE-208	ENST00000535934	ELOA3C	A0A087WX78	387 aa	Predicted RBP	11.67	□□□□□ -0.54
POLE-208	ENST00000535934		A6NLC8	198 aa		11.67	□□□□□ -0.54
POLE-208	ENST00000535934	PRR32	B1ATL7	298 aa		11.67	□□□□□ -0.54
POLE-208	ENST00000535934	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	11.67	□□□□□ -0.54
POLE-208	ENST00000535934	SLC17A2	O00624	439 aa		11.67	□□□□□ -0.54
POLE-208	ENST00000535934	ZFPL1	O95159	310 aa		11.67	□□□□□ -0.54
POLE-208	ENST00000535934	GYPA	P02724	150 aa		11.67	□□□□□ -0.54
POLE-208	ENST00000535934	H2BFM	P0C1H6	154 aa		11.67	□□□□□ -0.54
POLE-208	ENST00000535934	ALOX5AP	P20292	161 aa		11.67	□□□□□ -0.54
POLE-208	ENST00000535934	NFYB	P25208	207 aa		11.67	□□□□□ -0.54
POLE-208	ENST00000535934	RIDA	P52758	137 aa	Known RBP	11.67	□□□□□ -0.54
POLE-208	ENST00000535934	FGF12	P61328	243 aa		11.67	□□□□□ -0.54
POLE-208	ENST00000535934	PKIA	P61925	76 aa		11.67	□□□□□ -0.54
POLE-208	ENST00000535934	OR8B8	Q15620	311 aa		11.67	□□□□□ -0.54
POLE-208	ENST00000535934	BTNL3	Q6UXE8	466 aa		11.67	□□□□□ -0.54
POLE-208	ENST00000535934	DCUN1D4	Q92564	292 aa		11.67	□□□□□ -0.54
POLE-208	ENST00000535934	AQP10	Q96PS8	301 aa		11.67	□□□□□ -0.54
POLE-208	ENST00000535934	FGF23	Q9GZV9	251 aa	Predicted RBP	11.67	□□□□□ -0.54
POLE-208	ENST00000535934	CHST6	Q9GZX3	395 aa		11.67	□□□□□ -0.54
POLE-208	ENST00000535934	RGCC	Q9H4X1	137 aa		11.67	□□□□□ -0.54
POLE-208	ENST00000535934	RPS10P5	Q9NQ39	176 aa		11.67	□□□□□ -0.54
POLE-208	ENST00000535934	GAR1	Q9NY12	217 aa	Known RBP	11.67	□□□□□ -0.54
POLE-208	ENST00000535934	TRAV40	A0A0B4J280	105 aa		11.67	□□□□□ -0.54
POLE-208	ENST00000535934	MDFIC2	A0A1B0GVS7	189 aa		11.67	□□□□□ -0.54
POLE-208	ENST00000535934	MEGF11	A6BM72	1044 aa		11.67	□□□□□ -0.54
POLE-208	ENST00000535934	OOEP	A6NGQ2	149 aa		11.67	□□□□□ -0.54
POLE-208	ENST00000535934	DNAJC9-AS1	A6NH13	148 aa		11.67	□□□□□ -0.54
POLE-208	ENST00000535934	ANKRD30BL	A7E2S9	258 aa		11.67	□□□□□ -0.54
POLE-208	ENST00000535934	TGOLN2	O43493	480 aa		11.67	□□□□□ -0.54
POLE-208	ENST00000535934	ADAM20	O43506	726 aa		11.67	□□□□□ -0.54
POLE-208	ENST00000535934	SFTPB	P07988	381 aa		11.67	□□□□□ -0.54
POLE-208	ENST00000535934	SELL	P14151	372 aa		11.67	□□□□□ -0.54
POLE-208	ENST00000535934	PRTN3	P24158	256 aa		11.67	□□□□□ -0.54
POLE-208	ENST00000535934	SULT1A2	P50226	295 aa		11.67	□□□□□ -0.54
POLE-208	ENST00000535934	CLDN12	P56749	244 aa		11.67	□□□□□ -0.54
POLE-208	ENST00000535934	ZNF684	Q5T5D7	378 aa		11.67	□□□□□ -0.54
POLE-208	ENST00000535934	OR52W1	Q6IF63	320 aa		11.67	□□□□□ -0.54
POLE-208	ENST00000535934	DUX4L9	Q6RFH8	374 aa	Predicted RBP	11.67	□□□□□ -0.54
POLE-208	ENST00000535934	BRD3OS	Q6XYD6	125 aa		11.67	□□□□□ -0.54
POLE-208	ENST00000535934	OR10R2	Q8NGX6	335 aa		11.67	□□□□□ -0.54
POLE-208	ENST00000535934	PGAM5	Q96HS1	289 aa		11.67	□□□□□ -0.54
POLE-208	ENST00000535934	TECTB	Q96PL2	329 aa		11.67	□□□□□ -0.54
POLE-208	ENST00000535934	CLCC1	Q96S66	551 aa		11.67	□□□□□ -0.54
POLE-208	ENST00000535934	C2orf88	Q9BSF0	95 aa		11.67	□□□□□ -0.54
POLE-208	ENST00000535934	OR10A2	Q9H208	303 aa		11.67	□□□□□ -0.54
POLE-208	ENST00000535934	TMEM14A	Q9Y6G1	99 aa		11.67	□□□□□ -0.54
POLE-208	ENST00000535934	TRAV38-1	A0A0B4J264	116 aa		11.66	□□□□□ -0.54
POLE-208	ENST00000535934	SEC14L6	B5MCN3	397 aa		11.66	□□□□□ -0.54
POLE-208	ENST00000535934	PSMD9	O00233	223 aa		11.66	□□□□□ -0.54
POLE-208	ENST00000535934	FCGR3A	P08637	254 aa		11.66	□□□□□ -0.54
POLE-208	ENST00000535934	PGAM2	P15259	253 aa		11.66	□□□□□ -0.54
POLE-208	ENST00000535934	HIST1H1B	P16401	226 aa	Known RBP	11.66	□□□□□ -0.54
POLE-208	ENST00000535934	IL13RA1	P78552	427 aa		11.66	□□□□□ -0.54
POLE-208	ENST00000535934	TEX36	Q5VZQ5	186 aa		11.66	□□□□□ -0.54
POLE-208	ENST00000535934	WDR82	Q6UXN9	313 aa		11.66	□□□□□ -0.54
POLE-208	ENST00000535934	C9orf139	Q6ZV77	190 aa		11.66	□□□□□ -0.54
POLE-208	ENST00000535934	OR8B12	Q8NGG6	310 aa		11.66	□□□□□ -0.54
POLE-208	ENST00000535934	OR8S1	Q8NH09	359 aa		11.66	□□□□□ -0.54
POLE-208	ENST00000535934	TMED6	Q8WW62	240 aa		11.66	□□□□□ -0.54
POLE-208	ENST00000535934	SCGB3A2	Q96PL1	93 aa		11.66	□□□□□ -0.54
POLE-208	ENST00000535934	SSX3	Q99909	188 aa		11.66	□□□□□ -0.54
POLE-208	ENST00000535934	UNKL	Q9H9P5	680 aa	Known RBP	11.66	□□□□□ -0.54
POLE-208	ENST00000535934	ZNF230	Q9UIE0	474 aa	Predicted RBP	11.66	□□□□□ -0.54
POLE-208	ENST00000535934	LRP12	Q9Y561	859 aa		11.66	□□□□□ -0.54
POLE-208	ENST00000535934	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	11.65	□□□□□ -0.54
POLE-208	ENST00000535934	CDIPT	O14735	213 aa		11.65	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms