RNA–Protein interactions for RNA: ENST00000534754.5

SORL1-213, Transcript of sortilin related receptor 1, humanhuman

TSL 3

Gene SORL1, Length 2,222 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-213ENST00000534754 AGMATQ9BSE5 352 aa7.6□□□□□ -1.19
SORL1-213ENST00000534754 PSMG3Q9BT73 122 aaPredicted RBP7.6□□□□□ -1.19
SORL1-213ENST00000534754 RSG1Q9BU20 258 aa7.6□□□□□ -1.19
SORL1-213ENST00000534754 PPP1R14DQ9NXH3 145 aa7.6□□□□□ -1.19
SORL1-213ENST00000534754 PIGBOS1A0A0B4J2F0 54 aa7.6□□□□□ -1.19
SORL1-213ENST00000534754 H0Y980 276 aa7.6□□□□□ -1.19
SORL1-213ENST00000534754 H7BYZ3 331 aa7.6□□□□□ -1.19
SORL1-213ENST00000534754 CD55P08174 381 aa7.6□□□□□ -1.19
SORL1-213ENST00000534754 CRYGSP22914 178 aa7.6□□□□□ -1.19
SORL1-213ENST00000534754 TUBG1P23258 451 aa7.6□□□□□ -1.19
SORL1-213ENST00000534754 CCKARP32238 428 aa7.6□□□□□ -1.19
SORL1-213ENST00000534754 FUT6P51993 359 aa7.6□□□□□ -1.19
SORL1-213ENST00000534754 FGF8P55075 233 aaPredicted RBP7.6□□□□□ -1.19
SORL1-213ENST00000534754 FAM3BP58499 235 aaPredicted RBP7.6□□□□□ -1.19
SORL1-213ENST00000534754 PDCD1Q15116 288 aa7.6□□□□□ -1.19
SORL1-213ENST00000534754 RAB35Q15286 201 aa7.6□□□□□ -1.19
SORL1-213ENST00000534754 ZNF726P1Q15940 193 aa7.6□□□□□ -1.19
SORL1-213ENST00000534754 IQCJQ1A5X6 159 aa7.6□□□□□ -1.19
SORL1-213ENST00000534754 TMEM241Q24JQ0 296 aa7.6□□□□□ -1.19
SORL1-213ENST00000534754 TMEM42Q69YG0 159 aa7.6□□□□□ -1.19
SORL1-213ENST00000534754 ZNF66Q6ZN08 573 aa7.6□□□□□ -1.19
SORL1-213ENST00000534754 CYP2G1PQ6ZSU1 146 aa7.6□□□□□ -1.19
SORL1-213ENST00000534754 TMEM170AQ8WVE7 144 aa7.6□□□□□ -1.19
SORL1-213ENST00000534754 TAAR3PQ9P1P4 343 aa7.6□□□□□ -1.19
SORL1-213ENST00000534754 PRSS50Q9UI38 385 aa7.6□□□□□ -1.19
SORL1-213ENST00000534754 NPIPA2E9PIF3 369 aa7.59□□□□□ -1.19
SORL1-213ENST00000534754 NPIPA3F8WFD2 350 aa7.59□□□□□ -1.19
SORL1-213ENST00000534754 H3BP45 60 aa7.59□□□□□ -1.19
SORL1-213ENST00000534754 LCATP04180 440 aa7.59□□□□□ -1.19
SORL1-213ENST00000534754 MDH2P40926 338 aaKnown RBP7.59□□□□□ -1.19
SORL1-213ENST00000534754 GALR1P47211 349 aa7.59□□□□□ -1.19
SORL1-213ENST00000534754 SERF2P84101 59 aa7.59□□□□□ -1.19
SORL1-213ENST00000534754 TMEM267Q0VDI3 215 aaPredicted RBP7.59□□□□□ -1.19
SORL1-213ENST00000534754 P2RY6Q15077 328 aa7.59□□□□□ -1.19
SORL1-213ENST00000534754 BSXQ3C1V8 233 aa7.59□□□□□ -1.19
SORL1-213ENST00000534754 FAM27BQ5VT28 67 aa7.59□□□□□ -1.19
SORL1-213ENST00000534754 OR51G1Q8NGK1 321 aa7.59□□□□□ -1.19
SORL1-213ENST00000534754 EXTL1Q92935 676 aa7.59□□□□□ -1.19
SORL1-213ENST00000534754 THOC3Q96J01 351 aaKnown RBP7.59□□□□□ -1.19
SORL1-213ENST00000534754 ZNF385AQ96PM9 386 aaKnown RBP7.59□□□□□ -1.19
SORL1-213ENST00000534754 GPHA2Q96T91 129 aa7.59□□□□□ -1.19
SORL1-213ENST00000534754 ULBP2Q9BZM5 246 aa7.59□□□□□ -1.19
SORL1-213ENST00000534754 SVILO95425 2214 aa7.59□□□□□ -1.19
SORL1-213ENST00000534754 MAP1LC3B2A6NCE7 125 aa7.59□□□□□ -1.19
SORL1-213ENST00000534754 SLC22A20A6NK97 555 aa7.59□□□□□ -1.19
SORL1-213ENST00000534754 M0R143 59 aa7.59□□□□□ -1.19
SORL1-213ENST00000534754 VAMP5O95183 116 aa7.59□□□□□ -1.19
SORL1-213ENST00000534754 CNOT4O95628 575 aaKnown RBP7.59□□□□□ -1.19
SORL1-213ENST00000534754 SERPINA7P05543 415 aa7.59□□□□□ -1.19
SORL1-213ENST00000534754 METTL15P1P0C7V9 234 aa7.59□□□□□ -1.19
SORL1-213ENST00000534754 SLC25A6P12236 298 aa7.59□□□□□ -1.19
SORL1-213ENST00000534754 RAB4AP20338 218 aa7.59□□□□□ -1.19
SORL1-213ENST00000534754 IDH3GP51553 393 aaPredicted RBP7.59□□□□□ -1.19
SORL1-213ENST00000534754 UCNP55089 124 aa7.59□□□□□ -1.19
SORL1-213ENST00000534754 PRSS12P56730 875 aa7.59□□□□□ -1.19
SORL1-213ENST00000534754 ERVS71-1P61550 626 aa7.59□□□□□ -1.19
SORL1-213ENST00000534754 PAX5Q02548 391 aa7.59□□□□□ -1.19
SORL1-213ENST00000534754 PMS2P11Q13670 270 aa7.59□□□□□ -1.19
SORL1-213ENST00000534754 SRSF7Q16629 238 aaKnown RBP eCLIP7.59□□□□□ -1.19
SORL1-213ENST00000534754 ACOT6Q3I5F7 207 aaPredicted RBP7.59□□□□□ -1.19
SORL1-213ENST00000534754 MRPL41Q8IXM3 137 aaKnown RBP7.59□□□□□ -1.19
SORL1-213ENST00000534754 NECAP1Q8NC96 275 aa7.59□□□□□ -1.19
SORL1-213ENST00000534754 PINX1Q96BK5 328 aaKnown RBP7.59□□□□□ -1.19
SORL1-213ENST00000534754 ZNF845Q96IR2 970 aaPredicted RBP7.59□□□□□ -1.19
SORL1-213ENST00000534754 FER1L6-AS2Q96M78 137 aa7.59□□□□□ -1.19
SORL1-213ENST00000534754 ATG101Q9BSB4 218 aa7.59□□□□□ -1.19
SORL1-213ENST00000534754 SNHG12Q9BXW3 62 aa7.59□□□□□ -1.19
SORL1-213ENST00000534754 MAP1LC3BQ9GZQ8 125 aa7.59□□□□□ -1.19
SORL1-213ENST00000534754 RBKSQ9H477 322 aa7.59□□□□□ -1.19
SORL1-213ENST00000534754 VSIRQ9H7M9 311 aa7.59□□□□□ -1.19
SORL1-213ENST00000534754 MYOTQ9UBF9 498 aa7.59□□□□□ -1.19
SORL1-213ENST00000534754 ZNF391Q9UJN7 358 aa7.59□□□□□ -1.19
SORL1-213ENST00000534754 IGKV1D-13A0A0B4J2D9 117 aa7.58□□□□□ -1.2
SORL1-213ENST00000534754 SYNGR3O43761 229 aa7.58□□□□□ -1.2
SORL1-213ENST00000534754 ZNF737O75373 536 aa7.58□□□□□ -1.2
SORL1-213ENST00000534754 CEACAM4O75871 244 aa7.58□□□□□ -1.2
SORL1-213ENST00000534754 TUSC2O75896 110 aa7.58□□□□□ -1.2
SORL1-213ENST00000534754 ZFAND5O76080 213 aa7.58□□□□□ -1.2
SORL1-213ENST00000534754 KBTBD11O94819 623 aa7.58□□□□□ -1.2
SORL1-213ENST00000534754 HRASP01112 189 aa7.58□□□□□ -1.2
SORL1-213ENST00000534754 IGKV1-13P0DP09 117 aa7.58□□□□□ -1.2
SORL1-213ENST00000534754 COX5BP10606 129 aa7.58□□□□□ -1.2
SORL1-213ENST00000534754 G0S2P27469 103 aa7.58□□□□□ -1.2
SORL1-213ENST00000534754 S100GP29377 79 aa7.58□□□□□ -1.2
SORL1-213ENST00000534754 RELQ04864 619 aaPredicted RBP7.58□□□□□ -1.2
SORL1-213ENST00000534754 RNPS1Q15287 305 aaKnown RBP7.58□□□□□ -1.2
SORL1-213ENST00000534754 TMEM41BQ5BJD5 291 aa7.58□□□□□ -1.2
SORL1-213ENST00000534754 PLCXD3Q63HM9 321 aa7.58□□□□□ -1.2
SORL1-213ENST00000534754 SSX7Q7RTT5 188 aa7.58□□□□□ -1.2
SORL1-213ENST00000534754 CENPVQ7Z7K6 275 aaPredicted RBP7.58□□□□□ -1.2
SORL1-213ENST00000534754 FADS6Q8N9I5 356 aa7.58□□□□□ -1.2
SORL1-213ENST00000534754 FDCSPQ8NFU4 85 aa7.58□□□□□ -1.2
SORL1-213ENST00000534754 OR1F12Q8NHA8 337 aa7.58□□□□□ -1.2
SORL1-213ENST00000534754 TECTBQ96PL2 329 aa7.58□□□□□ -1.2
SORL1-213ENST00000534754 PRORYQ9H606 182 aa7.58□□□□□ -1.2
SORL1-213ENST00000534754 CCL28Q9NRJ3 127 aa7.58□□□□□ -1.2
SORL1-213ENST00000534754 DNAJC13O75165 2243 aa7.58□□□□□ -1.2
SORL1-213ENST00000534754 KIR2DS1A0A191URI9 304 aa7.58□□□□□ -1.2
SORL1-213ENST00000534754 FAM90A10PA6NDY2 464 aa7.58□□□□□ -1.2
SORL1-213ENST00000534754 FAM90A18PA6NE21 464 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms