RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 NOTCH4Q99466 2003 aa10.61□□□□□ -0.71
BDNF-218ENST00000533246 M0R296 226 aa10.61□□□□□ -0.71
BDNF-218ENST00000533246 NKX2-8O15522 239 aa10.61□□□□□ -0.71
BDNF-218ENST00000533246 SOD3P08294 240 aa10.61□□□□□ -0.71
BDNF-218ENST00000533246 LINC00271P0C7V0 271 aa10.61□□□□□ -0.71
BDNF-218ENST00000533246 ZP4Q12836 540 aa10.61□□□□□ -0.71
BDNF-218ENST00000533246 PLAC9Q5JTB6 97 aa10.61□□□□□ -0.71
BDNF-218ENST00000533246 LIAT1Q6ZQX7 453 aa10.61□□□□□ -0.71
BDNF-218ENST00000533246 RNASE8Q8TDE3 154 aaKnown RBP10.61□□□□□ -0.71
BDNF-218ENST00000533246 G6PC2Q9NQR9 355 aa10.61□□□□□ -0.71
BDNF-218ENST00000533246 LPAR3Q9UBY5 353 aa10.61□□□□□ -0.71
BDNF-218ENST00000533246 H0Y8G0 127 aa10.61□□□□□ -0.71
BDNF-218ENST00000533246 SPINK4O60575 86 aa10.61□□□□□ -0.71
BDNF-218ENST00000533246 DHRS11Q6UWP2 260 aa10.61□□□□□ -0.71
BDNF-218ENST00000533246 WFIKKN1Q96NZ8 548 aa10.61□□□□□ -0.71
BDNF-218ENST00000533246 COX5AP20674 150 aa10.61□□□□□ -0.71
BDNF-218ENST00000533246 CEACAM8P31997 349 aaPredicted RBP10.61□□□□□ -0.71
BDNF-218ENST00000533246 SRSF3P84103 164 aaKnown RBP10.61□□□□□ -0.71
BDNF-218ENST00000533246 GFRALQ6UXV0 394 aa10.61□□□□□ -0.71
BDNF-218ENST00000533246 ZNF664Q8N3J9 261 aa10.61□□□□□ -0.71
BDNF-218ENST00000533246 WDR54Q9H977 334 aa10.61□□□□□ -0.71
BDNF-218ENST00000533246 FAM206AQ9NX38 181 aa10.61□□□□□ -0.71
BDNF-218ENST00000533246 LIPGQ9Y5X9 500 aa10.61□□□□□ -0.71
BDNF-218ENST00000533246 TMEM238LA0A1B0GVL6 79 aa10.6□□□□□ -0.71
BDNF-218ENST00000533246 A8MWP6 167 aa10.6□□□□□ -0.71
BDNF-218ENST00000533246 LGALS4P56470 323 aa10.6□□□□□ -0.71
BDNF-218ENST00000533246 RUNX1Q01196 453 aa10.6□□□□□ -0.71
BDNF-218ENST00000533246 ZNF429Q86V71 674 aa10.6□□□□□ -0.71
BDNF-218ENST00000533246 KLHDC1Q8N7A1 406 aa10.6□□□□□ -0.71
BDNF-218ENST00000533246 SLC25A40Q8TBP6 338 aa10.6□□□□□ -0.71
BDNF-218ENST00000533246 DIRC2Q96SL1 478 aa10.6□□□□□ -0.71
BDNF-218ENST00000533246 ACTR3CQ9C0K3 210 aaPredicted RBP10.6□□□□□ -0.71
BDNF-218ENST00000533246 DICER1Q9UPY3 1922 aaKnown RBP10.6□□□□□ -0.71
BDNF-218ENST00000533246 HEATR5AQ86XA9 2040 aa10.6□□□□□ -0.71
BDNF-218ENST00000533246 IGHV1-45A0A0A0MS14 117 aa10.6□□□□□ -0.71
BDNF-218ENST00000533246 GALR2O43603 387 aaPredicted RBP10.6□□□□□ -0.71
BDNF-218ENST00000533246 SCTP09683 121 aa10.6□□□□□ -0.71
BDNF-218ENST00000533246 AGAP20933 346 aa10.6□□□□□ -0.71
BDNF-218ENST00000533246 DYNLT3P51808 116 aa10.6□□□□□ -0.71
BDNF-218ENST00000533246 TDGF1P3P51864 188 aa10.6□□□□□ -0.71
BDNF-218ENST00000533246 SLC25A47Q6Q0C1 308 aa10.6□□□□□ -0.71
BDNF-218ENST00000533246 MDP1Q86V88 176 aa10.6□□□□□ -0.71
BDNF-218ENST00000533246 HOGA1Q86XE5 327 aa10.6□□□□□ -0.71
BDNF-218ENST00000533246 VN1R17PQ8TDU5 208 aa10.6□□□□□ -0.71
BDNF-218ENST00000533246 SAT2Q96F10 170 aaPredicted RBP10.6□□□□□ -0.71
BDNF-218ENST00000533246 AESQ08117 197 aa10.6□□□□□ -0.71
BDNF-218ENST00000533246 ENDOGQ14249 297 aaKnown RBP10.6□□□□□ -0.71
BDNF-218ENST00000533246 MPV17LQ2QL34 196 aa10.6□□□□□ -0.71
BDNF-218ENST00000533246 WDR73Q6P4I2 378 aa10.6□□□□□ -0.71
BDNF-218ENST00000533246 ZNF826PQ6ZT77 177 aa10.6□□□□□ -0.71
BDNF-218ENST00000533246 TTTY12Q9BZ98 90 aa10.6□□□□□ -0.71
BDNF-218ENST00000533246 SEMA5BQ9P283 1151 aa10.6□□□□□ -0.71
BDNF-218ENST00000533246 TNFSF18Q9UNG2 199 aa10.6□□□□□ -0.71
BDNF-218ENST00000533246 FANCMQ8IYD8 2048 aa10.59□□□□□ -0.71
BDNF-218ENST00000533246 NPBWR2P48146 333 aa10.59□□□□□ -0.71
BDNF-218ENST00000533246 OR10C1Q96KK4 312 aa10.59□□□□□ -0.71
BDNF-218ENST00000533246 MEGF9Q9H1U4 602 aa10.59□□□□□ -0.71
BDNF-218ENST00000533246 MUC6Q6W4X9 2439 aa10.59□□□□□ -0.71
BDNF-218ENST00000533246 A0A1W2PRD5 423 aa10.59□□□□□ -0.71
BDNF-218ENST00000533246 A0A1W2PRF3 423 aa10.59□□□□□ -0.71
BDNF-218ENST00000533246 A0A1W2PRM7 423 aa10.59□□□□□ -0.71
BDNF-218ENST00000533246 CLDN34H7C241 214 aa10.59□□□□□ -0.71
BDNF-218ENST00000533246 HPRT1P00492 218 aa10.59□□□□□ -0.71
BDNF-218ENST00000533246 VDAC1P21796 283 aa10.59□□□□□ -0.71
BDNF-218ENST00000533246 ID4P47928 161 aa10.59□□□□□ -0.71
BDNF-218ENST00000533246 SLC38A11Q08AI6 406 aa10.59□□□□□ -0.71
BDNF-218ENST00000533246 C1orf100Q5SVJ3 147 aa10.59□□□□□ -0.71
BDNF-218ENST00000533246 SRXN1Q9BYN0 137 aa10.59□□□□□ -0.71
BDNF-218ENST00000533246 AURKAIP1Q9NWT8 199 aaPredicted RBP10.59□□□□□ -0.71
BDNF-218ENST00000533246 PILRBQ9UKJ0 227 aa10.59□□□□□ -0.71
BDNF-218ENST00000533246 TMEM265A0A087WTH1 108 aa10.59□□□□□ -0.71
BDNF-218ENST00000533246 FHITP49789 147 aa10.59□□□□□ -0.71
BDNF-218ENST00000533246 UCP3P55916 312 aa10.59□□□□□ -0.71
BDNF-218ENST00000533246 RPS23P62266 143 aaKnown RBP10.59□□□□□ -0.71
BDNF-218ENST00000533246 CFHR1Q03591 330 aa10.59□□□□□ -0.71
BDNF-218ENST00000533246 STUMQ69YW2 141 aa10.59□□□□□ -0.71
BDNF-218ENST00000533246 RSPO3Q9BXY4 272 aaPredicted RBP10.59□□□□□ -0.71
BDNF-218ENST00000533246 PRSS50Q9UI38 385 aa10.59□□□□□ -0.71
BDNF-218ENST00000533246 OR5B21A6NL26 309 aa10.58□□□□□ -0.72
BDNF-218ENST00000533246 SYNGR1O43759 233 aa10.58□□□□□ -0.72
BDNF-218ENST00000533246 SP1P08047 785 aa10.58□□□□□ -0.72
BDNF-218ENST00000533246 FCGR3AP08637 254 aa10.58□□□□□ -0.72
BDNF-218ENST00000533246 CCKARP32238 428 aa10.58□□□□□ -0.72
BDNF-218ENST00000533246 GAS1P54826 345 aa10.58□□□□□ -0.72
BDNF-218ENST00000533246 PCOLCEQ15113 449 aa10.58□□□□□ -0.72
BDNF-218ENST00000533246 ZNF343Q6P1L6 599 aa10.58□□□□□ -0.72
BDNF-218ENST00000533246 CISD2Q8N5K1 135 aaKnown RBP10.58□□□□□ -0.72
BDNF-218ENST00000533246 OR13D1Q8NGV5 346 aa10.58□□□□□ -0.72
BDNF-218ENST00000533246 LRFN3Q9BTN0 628 aa10.58□□□□□ -0.72
BDNF-218ENST00000533246 ANGPTL4Q9BY76 406 aa10.58□□□□□ -0.72
BDNF-218ENST00000533246 A0A0G2JMZ2 1700 aa10.58□□□□□ -0.72
BDNF-218ENST00000533246 LRRC37A2A6NM11 1700 aa10.58□□□□□ -0.72
BDNF-218ENST00000533246 PCNX2A6NKB5 2137 aa10.58□□□□□ -0.72
BDNF-218ENST00000533246 IGKV3D-11A0A0A0MRZ8 115 aa10.58□□□□□ -0.72
BDNF-218ENST00000533246 TRGV10A0A0A0MS01 117 aa10.58□□□□□ -0.72
BDNF-218ENST00000533246 CD1AP06126 327 aa10.58□□□□□ -0.72
BDNF-218ENST00000533246 CELA3AP09093 270 aa10.58□□□□□ -0.72
BDNF-218ENST00000533246 OR10J4P0C629 311 aa10.58□□□□□ -0.72
BDNF-218ENST00000533246 ZNF90Q03938 601 aa10.58□□□□□ -0.72
BDNF-218ENST00000533246 ANKRD55Q3KP44 614 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms