RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 CLDN1O95832 211 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 MOSP00540 346 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 HBE1P02100 147 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 CRYAAP02489 173 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 CATP04040 527 aaKnown RBP4.66□□□□□ -1.66
CD44-236ENST00000533222 FAM90A15PP0C7V4 464 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 FAM90A14PP0C7W9 464 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 ZNF728P0DKX0 622 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 CT45A10P0DMU9 189 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 CD58P19256 250 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 TIA1P31483 386 aaKnown RBP eCLIP4.66□□□□□ -1.66
CD44-236ENST00000533222 P2RY1P47900 373 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 CXCL12P48061 93 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 P2RX1P51575 399 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 SIRPAP78324 504 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 SLC25A11Q02978 314 aaKnown RBP4.66□□□□□ -1.66
CD44-236ENST00000533222 CFHR3Q02985 330 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 KIAA0040Q15053 153 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 TGIF1Q15583 401 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 LINC00303Q3SY05 128 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 SPATA45Q537H7 98 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 TECRLQ5HYJ1 363 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 ZNF506Q5JVG8 444 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 CPTPQ5TA50 214 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 TXNDC8Q6A555 127 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 AMMECR1LQ6DCA0 310 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 PWWP2BQ6NUJ5 590 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 C17orf99Q6UX52 265 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 ZNF66Q6ZN08 573 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 Q6ZRG5 221 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 MDGA2Q7Z553 956 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 C1QL2Q7Z5L3 287 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 ZNF440Q8IYI8 595 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 ZDHHC22Q8N966 263 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.66□□□□□ -1.66
CD44-236ENST00000533222 OR10G2Q8NGC3 310 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 OR51A4Q8NGJ6 313 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 MFSD8Q8NHS3 518 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 OCC1Q8TAD7 63 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 OR51E1Q8TCB6 317 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 BLNKQ8WV28 456 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 PPP1R1CQ8WVI7 109 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 ST8SIA1Q92185 356 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 LHX4Q969G2 390 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 ESAMQ96AP7 390 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 STARD4Q96DR4 205 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 MMABQ96EY8 250 aaPredicted RBP4.66□□□□□ -1.66
CD44-236ENST00000533222 NRTNQ99748 197 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 ANAPC13Q9BS18 74 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 GGTLC1Q9BX51 225 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 LPAR5Q9H1C0 372 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 CES1P1Q9UKY3 287 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 SLC7A7Q9UM01 511 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 PTRH2Q9Y3E5 179 aaKnown RBP4.66□□□□□ -1.66
CD44-236ENST00000533222 DNAJC15Q9Y5T4 150 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 TSC2P49815 1807 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 MYO10Q9HD67 2058 aa4.66□□□□□ -1.66
CD44-236ENST00000533222 A0A0G2JK05 382 aa4.65□□□□□ -1.67
CD44-236ENST00000533222 A0A0G2JLM5 398 aa4.65□□□□□ -1.67
CD44-236ENST00000533222 KIR2DS5A0A0G2JLQ3 304 aa4.65□□□□□ -1.67
CD44-236ENST00000533222 A0A0G2JNG1 304 aa4.65□□□□□ -1.67
CD44-236ENST00000533222 A0A1W2PP11 408 aa4.65□□□□□ -1.67
CD44-236ENST00000533222 B4DGG1 531 aa4.65□□□□□ -1.67
CD44-236ENST00000533222 HHLA1C9JL84 531 aa4.65□□□□□ -1.67
CD44-236ENST00000533222 H7C1C5 153 aa4.65□□□□□ -1.67
CD44-236ENST00000533222 M0R2Z0 102 aa4.65□□□□□ -1.67
CD44-236ENST00000533222 AGPAT2O15120 278 aa4.65□□□□□ -1.67
CD44-236ENST00000533222 RER1O15258 196 aa4.65□□□□□ -1.67
CD44-236ENST00000533222 TAPBPO15533 448 aa4.65□□□□□ -1.67
CD44-236ENST00000533222 TIMM8AO60220 97 aaPredicted RBP4.65□□□□□ -1.67
CD44-236ENST00000533222 FCN3O75636 299 aa4.65□□□□□ -1.67
CD44-236ENST00000533222 TRAPPC6AO75865 159 aa4.65□□□□□ -1.67
CD44-236ENST00000533222 OR7C1O76099 320 aaPredicted RBP4.65□□□□□ -1.67
CD44-236ENST00000533222 SFT2D2O95562 160 aa4.65□□□□□ -1.67
CD44-236ENST00000533222 TIMP1P01033 207 aa4.65□□□□□ -1.67
CD44-236ENST00000533222 IFNW1P05000 195 aa4.65□□□□□ -1.67
CD44-236ENST00000533222 H1F0P07305 194 aaKnown RBP4.65□□□□□ -1.67
CD44-236ENST00000533222 SRP19P09132 144 aaKnown RBP4.65□□□□□ -1.67
CD44-236ENST00000533222 CYBAP13498 195 aa4.65□□□□□ -1.67
CD44-236ENST00000533222 ATP1B2P14415 290 aaPredicted RBP4.65□□□□□ -1.67
CD44-236ENST00000533222 NANOS3P60323 173 aaKnown RBP4.65□□□□□ -1.67
CD44-236ENST00000533222 TNFAIP6P98066 277 aaPredicted RBP4.65□□□□□ -1.67
CD44-236ENST00000533222 ZNF266Q14584 549 aa4.65□□□□□ -1.67
CD44-236ENST00000533222 KIR2DS5Q14953 304 aa4.65□□□□□ -1.67
CD44-236ENST00000533222 OR7A5Q15622 319 aa4.65□□□□□ -1.67
CD44-236ENST00000533222 LRRC75BQ2VPJ9 315 aa4.65□□□□□ -1.67
CD44-236ENST00000533222 HLA-BQ31612 363 aa4.65□□□□□ -1.67
CD44-236ENST00000533222 TP53I3Q53FA7 332 aa4.65□□□□□ -1.67
CD44-236ENST00000533222 ZNF766Q5HY98 468 aa4.65□□□□□ -1.67
CD44-236ENST00000533222 PSMG4Q5JS54 123 aa4.65□□□□□ -1.67
CD44-236ENST00000533222 FFAR4Q5NUL3 377 aa4.65□□□□□ -1.67
CD44-236ENST00000533222 ZNF678Q5SXM1 525 aa4.65□□□□□ -1.67
CD44-236ENST00000533222 GJB7Q6PEY0 223 aa4.65□□□□□ -1.67
CD44-236ENST00000533222 CBLN3Q6UW01 205 aa4.65□□□□□ -1.67
CD44-236ENST00000533222 C17orf64Q86WR6 236 aa4.65□□□□□ -1.67
CD44-236ENST00000533222 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.65□□□□□ -1.67
CD44-236ENST00000533222 ZNF547Q8IVP9 402 aa4.65□□□□□ -1.67
CD44-236ENST00000533222 UMODL1-AS1Q8N2C9 162 aa4.65□□□□□ -1.67
CD44-236ENST00000533222 GPD1LQ8N335 351 aa4.65□□□□□ -1.67
CD44-236ENST00000533222 SIGLECL1Q8N7X8 197 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms