RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 CNIH3Q8TBE1 160 aa6.12□□□□□ -1.43
CD44-232ENST00000531118 ARL11Q969Q4 196 aa6.12□□□□□ -1.43
CD44-232ENST00000531118 NSMCE2Q96MF7 247 aa6.12□□□□□ -1.43
CD44-232ENST00000531118 RDH12Q96NR8 316 aa6.12□□□□□ -1.43
CD44-232ENST00000531118 FBXL15Q9H469 300 aa6.12□□□□□ -1.43
CD44-232ENST00000531118 PEMTQ9UBM1 199 aa6.12□□□□□ -1.43
CD44-232ENST00000531118 RNF150Q9ULK6 438 aa6.12□□□□□ -1.43
CD44-232ENST00000531118 H3BUA1 57 aa6.11□□□□□ -1.43
CD44-232ENST00000531118 MAGEB3O15480 346 aa6.11□□□□□ -1.43
CD44-232ENST00000531118 SPRY2O43597 315 aa6.11□□□□□ -1.43
CD44-232ENST00000531118 ZNF20P17024 532 aa6.11□□□□□ -1.43
CD44-232ENST00000531118 CD40LGP29965 261 aa6.11□□□□□ -1.43
CD44-232ENST00000531118 TCTAP57738 103 aa6.11□□□□□ -1.43
CD44-232ENST00000531118 ACTR3P61158 418 aa6.11□□□□□ -1.43
CD44-232ENST00000531118 GINS1Q14691 196 aa6.11□□□□□ -1.43
CD44-232ENST00000531118 MICAQ29983 383 aa6.11□□□□□ -1.43
CD44-232ENST00000531118 SPATS1Q496A3 300 aa6.11□□□□□ -1.43
CD44-232ENST00000531118 AKIRIN2Q53H80 203 aa6.11□□□□□ -1.43
CD44-232ENST00000531118 CT45A1Q5HYN5 189 aa6.11□□□□□ -1.43
CD44-232ENST00000531118 SSX6Q7RTT6 188 aa6.11□□□□□ -1.43
CD44-232ENST00000531118 SLC16A13Q7RTY0 426 aa6.11□□□□□ -1.43
CD44-232ENST00000531118 LFNGQ8NES3 379 aa6.11□□□□□ -1.43
CD44-232ENST00000531118 OR10V1Q8NGI7 309 aa6.11□□□□□ -1.43
CD44-232ENST00000531118 CT45A3Q8NHU0 189 aa6.11□□□□□ -1.43
CD44-232ENST00000531118 TSEN15Q8WW01 171 aaKnown RBP6.11□□□□□ -1.43
CD44-232ENST00000531118 NR1H4Q96RI1 486 aaPredicted RBP6.11□□□□□ -1.43
CD44-232ENST00000531118 FBXL17Q9UF56 701 aa6.11□□□□□ -1.43
CD44-232ENST00000531118 TAGLN3Q9UI15 199 aa6.11□□□□□ -1.43
CD44-232ENST00000531118 SAMHD1Q9Y3Z3 626 aaKnown RBP6.11□□□□□ -1.43
CD44-232ENST00000531118 A0A0G2JLM5 398 aa6.1□□□□□ -1.43
CD44-232ENST00000531118 TMEM30CPA0ZSE6 113 aa6.1□□□□□ -1.43
CD44-232ENST00000531118 ZNF670-ZNF695F2Z2N8 137 aa6.1□□□□□ -1.43
CD44-232ENST00000531118 RRHO14718 337 aa6.1□□□□□ -1.43
CD44-232ENST00000531118 AIREO43918 545 aa6.1□□□□□ -1.43
CD44-232ENST00000531118 CDK2AP2O75956 126 aa6.1□□□□□ -1.43
CD44-232ENST00000531118 HMGN1P05114 100 aa6.1□□□□□ -1.43
CD44-232ENST00000531118 OCM2P0CE71 109 aa6.1□□□□□ -1.43
CD44-232ENST00000531118 OCMP0CE72 109 aaPredicted RBP6.1□□□□□ -1.43
CD44-232ENST00000531118 UBCP0CG48 685 aaKnown RBP6.1□□□□□ -1.43
CD44-232ENST00000531118 DBTP11182 482 aaKnown RBP6.1□□□□□ -1.43
CD44-232ENST00000531118 EDN2P20800 178 aa6.1□□□□□ -1.43
CD44-232ENST00000531118 KIR2DS2P43631 304 aa6.1□□□□□ -1.43
CD44-232ENST00000531118 ZNF134P52741 427 aa6.1□□□□□ -1.43
CD44-232ENST00000531118 GYS2P54840 703 aa6.1□□□□□ -1.43
CD44-232ENST00000531118 NANOS2P60321 138 aaKnown RBP6.1□□□□□ -1.43
CD44-232ENST00000531118 PLGLAQ15195 96 aa6.1□□□□□ -1.43
CD44-232ENST00000531118 RBMS2Q15434 407 aaKnown RBP6.1□□□□□ -1.43
CD44-232ENST00000531118 ZSCAN26Q16670 478 aa6.1□□□□□ -1.43
CD44-232ENST00000531118 TATDN3Q17R31 274 aa6.1□□□□□ -1.43
CD44-232ENST00000531118 PIGYQ3MUY2 71 aa6.1□□□□□ -1.43
CD44-232ENST00000531118 TM4SF20Q53R12 229 aa6.1□□□□□ -1.43
CD44-232ENST00000531118 Q6ZWC4 215 aa6.1□□□□□ -1.43
CD44-232ENST00000531118 TCEANCQ8N8B7 351 aa6.1□□□□□ -1.43
CD44-232ENST00000531118 OR13C9Q8NGT0 318 aa6.1□□□□□ -1.43
CD44-232ENST00000531118 OR10AC1Q8NH08 325 aa6.1□□□□□ -1.43
CD44-232ENST00000531118 ADI1Q9BV57 179 aa6.1□□□□□ -1.43
CD44-232ENST00000531118 DPCDQ9BVM2 203 aaPredicted RBP6.1□□□□□ -1.43
CD44-232ENST00000531118 ADGRL4Q9HBW9 690 aa6.1□□□□□ -1.43
CD44-232ENST00000531118 ZNF355PQ9NSJ1 428 aa6.1□□□□□ -1.43
CD44-232ENST00000531118 ZNF581Q9P0T4 197 aa6.1□□□□□ -1.43
CD44-232ENST00000531118 GNG12Q9UBI6 72 aa6.1□□□□□ -1.43
CD44-232ENST00000531118 PEF1Q9UBV8 284 aaKnown RBP6.1□□□□□ -1.43
CD44-232ENST00000531118 APLNQ9ULZ1 77 aa6.1□□□□□ -1.43
CD44-232ENST00000531118 FCN1O00602 326 aa6.09□□□□□ -1.43
CD44-232ENST00000531118 ORC5O43913 435 aa6.09□□□□□ -1.43
CD44-232ENST00000531118 MITFO75030 526 aaPredicted RBP6.09□□□□□ -1.43
CD44-232ENST00000531118 FAM107AO95990 144 aa6.09□□□□□ -1.43
CD44-232ENST00000531118 CA2P00918 260 aa6.09□□□□□ -1.43
CD44-232ENST00000531118 MT-ND2P03891 347 aa6.09□□□□□ -1.43
CD44-232ENST00000531118 KRT8P05787 483 aa6.09□□□□□ -1.43
CD44-232ENST00000531118 CTRB1P17538 263 aa6.09□□□□□ -1.43
CD44-232ENST00000531118 GZMHP20718 246 aa6.09□□□□□ -1.43
CD44-232ENST00000531118 APOC4P55056 127 aa6.09□□□□□ -1.43
CD44-232ENST00000531118 DEFB114Q30KQ6 69 aa6.09□□□□□ -1.43
CD44-232ENST00000531118 TMEM30BQ3MIR4 351 aa6.09□□□□□ -1.43
CD44-232ENST00000531118 CTRB2Q6GPI1 263 aa6.09□□□□□ -1.43
CD44-232ENST00000531118 ELP2Q6IA86 826 aa6.09□□□□□ -1.43
CD44-232ENST00000531118 ZNF343Q6P1L6 599 aa6.09□□□□□ -1.43
CD44-232ENST00000531118 FAM131AQ6UXB0 335 aa6.09□□□□□ -1.43
CD44-232ENST00000531118 Q8N1X5 172 aa6.09□□□□□ -1.43
CD44-232ENST00000531118 ARHGAP24Q8N264 748 aa6.09□□□□□ -1.43
CD44-232ENST00000531118 PRSS35Q8N3Z0 413 aa6.09□□□□□ -1.43
CD44-232ENST00000531118 SUMF2Q8NBJ7 301 aa6.09□□□□□ -1.43
CD44-232ENST00000531118 C2CD4CQ8TF44 421 aa6.09□□□□□ -1.43
CD44-232ENST00000531118 ABHD14AQ9BUJ0 271 aa6.09□□□□□ -1.43
CD44-232ENST00000531118 MFFQ9GZY8 342 aa6.09□□□□□ -1.43
CD44-232ENST00000531118 REEP1Q9H902 201 aa6.09□□□□□ -1.43
CD44-232ENST00000531118 CLN6Q9NWW5 311 aa6.09□□□□□ -1.43
CD44-232ENST00000531118 VPS13BQ7Z7G8 4022 aa6.08□□□□□ -1.44
CD44-232ENST00000531118 FAT1Q14517 4588 aa6.08□□□□□ -1.44
CD44-232ENST00000531118 A0A0B4J203 849 aa6.08□□□□□ -1.44
CD44-232ENST00000531118 AIPO00170 330 aa6.08□□□□□ -1.44
CD44-232ENST00000531118 BMPR1BO00238 502 aa6.08□□□□□ -1.44
CD44-232ENST00000531118 IFNA4P05014 189 aa6.08□□□□□ -1.44
CD44-232ENST00000531118 TMEM225BP0DP42 221 aa6.08□□□□□ -1.44
CD44-232ENST00000531118 HSD17B1P14061 328 aa6.08□□□□□ -1.44
CD44-232ENST00000531118 ATP6V1B2P21281 511 aa6.08□□□□□ -1.44
CD44-232ENST00000531118 AADACP22760 399 aa6.08□□□□□ -1.44
CD44-232ENST00000531118 CDK5Q00535 292 aa6.08□□□□□ -1.44
CD44-232ENST00000531118 GNMTQ14749 295 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms