RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 P2RX4Q99571 388 aa13.4□□□□□ -0.26
PCDHA4-203ENST00000530339 ELOVL1Q9BW60 279 aa13.4□□□□□ -0.26
PCDHA4-203ENST00000530339 AURKAIP1Q9NWT8 199 aaPredicted RBP13.4□□□□□ -0.26
PCDHA4-203ENST00000530339 DIRC3C9JPN6 131 aa13.4□□□□□ -0.26
PCDHA4-203ENST00000530339 H0Y980 276 aa13.4□□□□□ -0.26
PCDHA4-203ENST00000530339 KLF4O43474 513 aa13.4□□□□□ -0.26
PCDHA4-203ENST00000530339 SPTBP11277 2137 aa13.4□□□□□ -0.26
PCDHA4-203ENST00000530339 IGLV3-21P80748 117 aaPredicted RBP13.4□□□□□ -0.26
PCDHA4-203ENST00000530339 OR1P1Q8NH06 330 aa13.4□□□□□ -0.26
PCDHA4-203ENST00000530339 SMOC1Q9H4F8 434 aa13.4□□□□□ -0.26
PCDHA4-203ENST00000530339 METTL1Q9UBP6 276 aaKnown RBP13.4□□□□□ -0.26
PCDHA4-203ENST00000530339 DANCRP0C864 163 aa13.4□□□□□ -0.26
PCDHA4-203ENST00000530339 ORM2P19652 201 aa13.4□□□□□ -0.26
PCDHA4-203ENST00000530339 CEACAM21Q3KPI0 293 aa13.4□□□□□ -0.26
PCDHA4-203ENST00000530339 APCDD1LQ8NCL9 501 aa13.4□□□□□ -0.26
PCDHA4-203ENST00000530339 RSG1Q9BU20 258 aa13.4□□□□□ -0.26
PCDHA4-203ENST00000530339 MAP1LC3CQ9BXW4 147 aa13.4□□□□□ -0.26
PCDHA4-203ENST00000530339 FZR1Q9UM11 496 aa13.4□□□□□ -0.26
PCDHA4-203ENST00000530339 NPTNQ9Y639 398 aa13.4□□□□□ -0.26
PCDHA4-203ENST00000530339 GREB1LQ9C091 1923 aaPredicted RBP13.4□□□□□ -0.26
PCDHA4-203ENST00000530339 A0A0G2JK05 382 aa13.4□□□□□ -0.27
PCDHA4-203ENST00000530339 TMPRSS3P57727 454 aa13.4□□□□□ -0.27
PCDHA4-203ENST00000530339 STPG1Q5TH74 334 aa13.4□□□□□ -0.27
PCDHA4-203ENST00000530339 SLC25A47Q6Q0C1 308 aa13.4□□□□□ -0.27
PCDHA4-203ENST00000530339 ZNF385AQ96PM9 386 aaKnown RBP13.4□□□□□ -0.27
PCDHA4-203ENST00000530339 GPR61Q9BZJ8 451 aa13.4□□□□□ -0.27
PCDHA4-203ENST00000530339 CARHSP1Q9Y2V2 147 aaKnown RBP13.4□□□□□ -0.27
PCDHA4-203ENST00000530339 SPAARA0A1B0GVQ0 90 aa13.39□□□□□ -0.27
PCDHA4-203ENST00000530339 COX6B1P14854 86 aa13.39□□□□□ -0.27
PCDHA4-203ENST00000530339 DCAF10Q5QP82 559 aa13.39□□□□□ -0.27
PCDHA4-203ENST00000530339 TAF1LQ8IZX4 1826 aa13.39□□□□□ -0.27
PCDHA4-203ENST00000530339 C4orf51C9J302 202 aa13.39□□□□□ -0.27
PCDHA4-203ENST00000530339 MPDU1O75352 247 aa13.39□□□□□ -0.27
PCDHA4-203ENST00000530339 SLC23A3Q6PIS1 610 aa13.39□□□□□ -0.27
PCDHA4-203ENST00000530339 TEPPQ6URK8 271 aa13.39□□□□□ -0.27
PCDHA4-203ENST00000530339 OR8B3Q8NGG8 313 aa13.39□□□□□ -0.27
PCDHA4-203ENST00000530339 CCL17Q92583 94 aa13.39□□□□□ -0.27
PCDHA4-203ENST00000530339 OR8B2Q96RD0 313 aa13.39□□□□□ -0.27
PCDHA4-203ENST00000530339 TDRD15B5MCY1 1934 aaKnown RBP13.39□□□□□ -0.27
PCDHA4-203ENST00000530339 IGHV3-13P01766 116 aa13.39□□□□□ -0.27
PCDHA4-203ENST00000530339 IGHV3-7P01780 117 aa13.39□□□□□ -0.27
PCDHA4-203ENST00000530339 CSN3P07498 182 aa13.39□□□□□ -0.27
PCDHA4-203ENST00000530339 FGF12P61328 243 aa13.39□□□□□ -0.27
PCDHA4-203ENST00000530339 SAXO1Q8IYX7 474 aa13.39□□□□□ -0.27
PCDHA4-203ENST00000530339 NAGKQ9UJ70 344 aa13.39□□□□□ -0.27
PCDHA4-203ENST00000530339 LMX1BO60663 402 aa13.39□□□□□ -0.27
PCDHA4-203ENST00000530339 FGF5P12034 268 aa13.39□□□□□ -0.27
PCDHA4-203ENST00000530339 CCL4P13236 92 aa13.39□□□□□ -0.27
PCDHA4-203ENST00000530339 PPP1CCP36873 323 aaKnown RBP13.39□□□□□ -0.27
PCDHA4-203ENST00000530339 RND3P61587 244 aa13.39□□□□□ -0.27
PCDHA4-203ENST00000530339 FHL5Q5TD97 284 aa13.39□□□□□ -0.27
PCDHA4-203ENST00000530339 TGIF2LXQ8IUE1 241 aa13.39□□□□□ -0.27
PCDHA4-203ENST00000530339 OR52L2PQ8NGH6 319 aa13.39□□□□□ -0.27
PCDHA4-203ENST00000530339 MS4A5Q9H3V2 200 aa13.39□□□□□ -0.27
PCDHA4-203ENST00000530339 IGSF23A1L1A6 192 aa13.38□□□□□ -0.27
PCDHA4-203ENST00000530339 APCSP02743 223 aa13.38□□□□□ -0.27
PCDHA4-203ENST00000530339 PPOXP50336 477 aa13.38□□□□□ -0.27
PCDHA4-203ENST00000530339 TMEM251Q8N6I4 163 aa13.38□□□□□ -0.27
PCDHA4-203ENST00000530339 CTHRC1Q96CG8 243 aa13.38□□□□□ -0.27
PCDHA4-203ENST00000530339 DDA1Q9BW61 102 aa13.38□□□□□ -0.27
PCDHA4-203ENST00000530339 TRAV39A0A0B4J263 110 aa13.38□□□□□ -0.27
PCDHA4-203ENST00000530339 P01737 135 aa13.38□□□□□ -0.27
PCDHA4-203ENST00000530339 ORM1P02763 201 aa13.38□□□□□ -0.27
PCDHA4-203ENST00000530339 SPINK2P20155 84 aa13.38□□□□□ -0.27
PCDHA4-203ENST00000530339 IL11P20809 199 aa13.38□□□□□ -0.27
PCDHA4-203ENST00000530339 MARS2Q96GW9 593 aaKnown RBP13.38□□□□□ -0.27
PCDHA4-203ENST00000530339 TRIP12Q14669 1992 aaPredicted RBP13.38□□□□□ -0.27
PCDHA4-203ENST00000530339 NPIPB9F8W1W9 429 aa13.38□□□□□ -0.27
PCDHA4-203ENST00000530339 NPY1RP25929 384 aa13.38□□□□□ -0.27
PCDHA4-203ENST00000530339 RPL13AP40429 203 aaKnown RBP13.38□□□□□ -0.27
PCDHA4-203ENST00000530339 C21orf62-AS1Q17RA5 79 aa13.38□□□□□ -0.27
PCDHA4-203ENST00000530339 PMS2CLQ68D20 193 aa13.38□□□□□ -0.27
PCDHA4-203ENST00000530339 MYO16Q9Y6X6 1858 aa13.38□□□□□ -0.27
PCDHA4-203ENST00000530339 C3orf80F5H4A9 247 aa13.38□□□□□ -0.27
PCDHA4-203ENST00000530339 ISLRO14498 428 aa13.38□□□□□ -0.27
PCDHA4-203ENST00000530339 SMPD2O60906 423 aa13.38□□□□□ -0.27
PCDHA4-203ENST00000530339 MT-ND6P03923 174 aa13.38□□□□□ -0.27
PCDHA4-203ENST00000530339 COX5BP10606 129 aa13.38□□□□□ -0.27
PCDHA4-203ENST00000530339 Q1RN00 199 aa13.38□□□□□ -0.27
PCDHA4-203ENST00000530339 WDFY1Q8IWB7 410 aa13.38□□□□□ -0.27
PCDHA4-203ENST00000530339 CLN8Q9UBY8 286 aa13.38□□□□□ -0.27
PCDHA4-203ENST00000530339 FAM186AA6NE01 2351 aa13.37□□□□□ -0.27
PCDHA4-203ENST00000530339 TGIF2-C20orf24A0A0A6YYL0 155 aa13.37□□□□□ -0.27
PCDHA4-203ENST00000530339 MS4A18H0YCH9 400 aa13.37□□□□□ -0.27
PCDHA4-203ENST00000530339 SCGB1C2P0DMR2 95 aa13.37□□□□□ -0.27
PCDHA4-203ENST00000530339 PRF1P14222 555 aa13.37□□□□□ -0.27
PCDHA4-203ENST00000530339 MS4A18Q3C1V0 323 aa13.37□□□□□ -0.27
PCDHA4-203ENST00000530339 CXorf66Q5JRM2 361 aaPredicted RBP13.37□□□□□ -0.27
PCDHA4-203ENST00000530339 RIPPLY2Q5TAB7 128 aa13.37□□□□□ -0.27
PCDHA4-203ENST00000530339 POC1AQ8NBT0 407 aa13.37□□□□□ -0.27
PCDHA4-203ENST00000530339 OR2I1PQ8NGU4 316 aa13.37□□□□□ -0.27
PCDHA4-203ENST00000530339 HEXA-AS1Q9H8Q6 139 aa13.37□□□□□ -0.27
PCDHA4-203ENST00000530339 FAM206AQ9NX38 181 aa13.37□□□□□ -0.27
PCDHA4-203ENST00000530339 KCNMB2Q9Y691 235 aa13.37□□□□□ -0.27
PCDHA4-203ENST00000530339 SYNGR1O43759 233 aa13.37□□□□□ -0.27
PCDHA4-203ENST00000530339 HIST1H1EP10412 219 aaKnown RBP13.37□□□□□ -0.27
PCDHA4-203ENST00000530339 LYRM7Q5U5X0 104 aa13.37□□□□□ -0.27
PCDHA4-203ENST00000530339 HPRT1P00492 218 aa13.37□□□□□ -0.27
PCDHA4-203ENST00000530339 CD1BP29016 333 aa13.37□□□□□ -0.27
PCDHA4-203ENST00000530339 MESP2Q0VG99 397 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms