RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 BAXQ07812 192 aa12.11□□□□□ -0.47
USP48-213ENST00000529637 Q0VFX4 171 aa12.11□□□□□ -0.47
USP48-213ENST00000529637 SLC23A3Q6PIS1 610 aa12.11□□□□□ -0.47
USP48-213ENST00000529637 ZNF705AQ6ZN79 300 aaPredicted RBP12.11□□□□□ -0.47
USP48-213ENST00000529637 PPP1R32Q7Z5V6 425 aa12.11□□□□□ -0.47
USP48-213ENST00000529637 GATAD1Q8WUU5 269 aa12.11□□□□□ -0.47
USP48-213ENST00000529637 TMEM170AQ8WVE7 144 aa12.11□□□□□ -0.47
USP48-213ENST00000529637 TMEM18Q96B42 140 aa12.11□□□□□ -0.47
USP48-213ENST00000529637 OR51B6Q9H340 312 aa12.11□□□□□ -0.47
USP48-213ENST00000529637 GPR35Q9HC97 309 aa12.11□□□□□ -0.47
USP48-213ENST00000529637 DEPPQ9NTK1 212 aa12.11□□□□□ -0.47
USP48-213ENST00000529637 SCTP09683 121 aa12.1□□□□□ -0.47
USP48-213ENST00000529637 FUT6P51993 359 aa12.1□□□□□ -0.47
USP48-213ENST00000529637 IL24Q13007 206 aa12.1□□□□□ -0.47
USP48-213ENST00000529637 EIF3IQ13347 325 aaKnown RBP12.1□□□□□ -0.47
USP48-213ENST00000529637 IQCJQ1A5X6 159 aa12.1□□□□□ -0.47
USP48-213ENST00000529637 OR5T1Q8NG75 326 aa12.1□□□□□ -0.47
USP48-213ENST00000529637 CCL28Q9NRJ3 127 aa12.1□□□□□ -0.47
USP48-213ENST00000529637 FKBP11Q9NYL4 201 aa12.1□□□□□ -0.47
USP48-213ENST00000529637 CNOT4O95628 575 aaKnown RBP12.1□□□□□ -0.47
USP48-213ENST00000529637 TRA2AQ13595 282 aaKnown RBP eCLIP12.1□□□□□ -0.478e-6■□□□□ 8.1
USP48-213ENST00000529637 TESK1Q15569 626 aa12.1□□□□□ -0.47
USP48-213ENST00000529637 BSXQ3C1V8 233 aa12.1□□□□□ -0.47
USP48-213ENST00000529637 DOCK10Q96BY6 2186 aa12.1□□□□□ -0.47
USP48-213ENST00000529637 R3HDM4Q96D70 268 aa12.1□□□□□ -0.47
USP48-213ENST00000529637 SPIN2AQ99865 258 aa12.1□□□□□ -0.47
USP48-213ENST00000529637 SPIN2BQ9BPZ2 258 aa12.1□□□□□ -0.47
USP48-213ENST00000529637 ZNF816-ZNF321PA0A0X1KG74 233 aa12.09□□□□□ -0.47
USP48-213ENST00000529637 FAM166BA8MTA8 275 aa12.09□□□□□ -0.47
USP48-213ENST00000529637 H7BYZ3 331 aa12.09□□□□□ -0.47
USP48-213ENST00000529637 NTN3O00634 580 aaPredicted RBP12.09□□□□□ -0.47
USP48-213ENST00000529637 PDCD6O75340 191 aa12.09□□□□□ -0.47
USP48-213ENST00000529637 IFNA5P01569 189 aa12.09□□□□□ -0.47
USP48-213ENST00000529637 METTL15P1P0C7V9 234 aa12.09□□□□□ -0.47
USP48-213ENST00000529637 IRF2P14316 349 aa12.09□□□□□ -0.47
USP48-213ENST00000529637 TMEM241Q24JQ0 296 aa12.09□□□□□ -0.47
USP48-213ENST00000529637 C1orf194Q5T5A4 169 aa12.09□□□□□ -0.47
USP48-213ENST00000529637 DPPA3Q6W0C5 159 aa12.09□□□□□ -0.47
USP48-213ENST00000529637 Q6ZRM9 215 aa12.09□□□□□ -0.47
USP48-213ENST00000529637 DIRC2Q96SL1 478 aa12.09□□□□□ -0.47
USP48-213ENST00000529637 PLK3Q9H4B4 646 aa12.09□□□□□ -0.47
USP48-213ENST00000529637 SH2D2AQ9NP31 389 aa12.09□□□□□ -0.47
USP48-213ENST00000529637 NAT8Q9UHE5 227 aa12.09□□□□□ -0.47
USP48-213ENST00000529637 PINLYPA6NC86 204 aa12.09□□□□□ -0.47
USP48-213ENST00000529637 TMEM210A6NLX4 147 aa12.09□□□□□ -0.47
USP48-213ENST00000529637 ZNF737O75373 536 aa12.09□□□□□ -0.47
USP48-213ENST00000529637 IAPPP10997 89 aa12.09□□□□□ -0.47
USP48-213ENST00000529637 VDAC1P21796 283 aa12.09□□□□□ -0.47
USP48-213ENST00000529637 FAM3BP58499 235 aaPredicted RBP12.09□□□□□ -0.47
USP48-213ENST00000529637 DCAF10Q5QP82 559 aa12.09□□□□□ -0.47
USP48-213ENST00000529637 OR56B2PQ8NGI1 322 aa12.09□□□□□ -0.47
USP48-213ENST00000529637 CT55Q8WUE5 264 aa12.09□□□□□ -0.47
USP48-213ENST00000529637 AURKAIP1Q9NWT8 199 aaPredicted RBP12.09□□□□□ -0.47
USP48-213ENST00000529637 C5orf49A4QMS7 147 aa12.09□□□□□ -0.47
USP48-213ENST00000529637 IGKV1D-33P01593 117 aa12.09□□□□□ -0.47
USP48-213ENST00000529637 IGKV1-33P01594 117 aa12.09□□□□□ -0.47
USP48-213ENST00000529637 ARF1P84077 181 aaKnown RBP12.09□□□□□ -0.47
USP48-213ENST00000529637 GBGT1Q8N5D6 347 aa12.09□□□□□ -0.47
USP48-213ENST00000529637 MBD3L1Q8WWY6 194 aa12.09□□□□□ -0.47
USP48-213ENST00000529637 LOXL2Q9Y4K0 774 aa12.09□□□□□ -0.47
USP48-213ENST00000529637 hCG_38984A0A1B0GV85 526 aa12.08□□□□□ -0.48
USP48-213ENST00000529637 MAP1LC3B2A6NCE7 125 aa12.08□□□□□ -0.48
USP48-213ENST00000529637 OR3A1P47881 315 aa12.08□□□□□ -0.48
USP48-213ENST00000529637 ACTL10Q5JWF8 245 aa12.08□□□□□ -0.48
USP48-213ENST00000529637 SDSLQ96GA7 329 aa12.08□□□□□ -0.48
USP48-213ENST00000529637 ACY3Q96HD9 319 aa12.08□□□□□ -0.48
USP48-213ENST00000529637 MAP1LC3BQ9GZQ8 125 aa12.08□□□□□ -0.48
USP48-213ENST00000529637 DNPH1O43598 174 aa12.08□□□□□ -0.48
USP48-213ENST00000529637 SELEP16581 610 aa12.08□□□□□ -0.48
USP48-213ENST00000529637 MDH2P40926 338 aaKnown RBP12.08□□□□□ -0.48
USP48-213ENST00000529637 GPM6AP51674 278 aa12.08□□□□□ -0.48
USP48-213ENST00000529637 CYP2G1PQ6ZSU1 146 aa12.08□□□□□ -0.48
USP48-213ENST00000529637 MRPL21Q7Z2W9 205 aaKnown RBP12.08□□□□□ -0.48
USP48-213ENST00000529637 HAPLN4Q86UW8 402 aa12.08□□□□□ -0.48
USP48-213ENST00000529637 CPEB3Q8NE35 698 aaKnown RBP12.08□□□□□ -0.48
USP48-213ENST00000529637 HS3ST6Q96QI5 342 aa12.08□□□□□ -0.48
USP48-213ENST00000529637 SLC22A20A6NK97 555 aa12.07□□□□□ -0.48
USP48-213ENST00000529637 EDN3P14138 238 aa12.07□□□□□ -0.48
USP48-213ENST00000529637 RBM11P57052 281 aaKnown RBP12.07□□□□□ -0.48
USP48-213ENST00000529637 SRPXP78539 464 aa12.07□□□□□ -0.48
USP48-213ENST00000529637 C6orf15Q6UXA7 325 aaPredicted RBP12.07□□□□□ -0.48
USP48-213ENST00000529637 MRGPRGQ86SM5 289 aa12.07□□□□□ -0.48
USP48-213ENST00000529637 EXTL1Q92935 676 aa12.07□□□□□ -0.48
USP48-213ENST00000529637 OR5B12Q96R08 314 aa12.07□□□□□ -0.48
USP48-213ENST00000529637 CDX2Q99626 313 aaPredicted RBP12.07□□□□□ -0.48
USP48-213ENST00000529637 HES7Q9BYE0 225 aa12.07□□□□□ -0.48
USP48-213ENST00000529637 TNRC18O15417 2968 aaPredicted RBP12.07□□□□□ -0.48
USP48-213ENST00000529637 KIR2DL5BA0A0G2JN68 375 aa12.07□□□□□ -0.48
USP48-213ENST00000529637 KIR2DL5BA0A0G2JPC4 375 aa12.07□□□□□ -0.48
USP48-213ENST00000529637 CLEC18AA5D8T8 446 aa12.07□□□□□ -0.48
USP48-213ENST00000529637 KIAA1324LA8MWY0 1029 aaPredicted RBP12.07□□□□□ -0.48
USP48-213ENST00000529637 DMRTA1Q5VZB9 504 aa12.07□□□□□ -0.48
USP48-213ENST00000529637 LINC00696Q6ZRV3 163 aa12.07□□□□□ -0.48
USP48-213ENST00000529637 TIPARPQ7Z3E1 657 aaKnown RBP12.07□□□□□ -0.48
USP48-213ENST00000529637 KIR2DL5AQ8N109 375 aa12.07□□□□□ -0.48
USP48-213ENST00000529637 CLEC18CQ8NCF0 446 aa12.07□□□□□ -0.48
USP48-213ENST00000529637 OR1K1Q8NGR3 316 aa12.07□□□□□ -0.48
USP48-213ENST00000529637 SCGB1C1Q8TD33 95 aa12.07□□□□□ -0.48
USP48-213ENST00000529637 GPR146Q96CH1 333 aa12.07□□□□□ -0.48
USP48-213ENST00000529637 P2RX4Q99571 388 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms